NO24G01150, NO24G01150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01150 vs. NCBI_GenBank
Match: OGW46597.1 (hypothetical protein A2078_11425 [Nitrospirae bacterium GWC2_57_9]) HSP 1 Score: 71.2 bits (173), Expect = 6.600e-9 Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0 Query: 1 MMGAELVVGVLSNSLGMLGDAGHMLADG----------REGGIARTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLVHDLGALTQSSRGS 115 MM AE++ G+LSNSL +L DAGHM D + + T R+ G R+ + A +N LV ++ Y++YEAY RIL+ P VG +L A +GL+ NV+G F+++ + + + RG+ Sbjct: 53 MMAAEIIGGLLSNSLALLSDAGHMFTDNLALLLSFFALKFASMPATDRKTFGFYRLEILAAFVNGTVLVFMSFYIMYEAYLRILHPQP-VGGRLMLVVALIGLVANVIGAFILNKHSSTSLNIRGA 177
BLAST of NO24G01150 vs. NCBI_GenBank
Match: WP_046524687.1 (cation transporter [Bacillus campisalis] >KKK37144.1 zinc transporter ZitB [Bacillus campisalis]) HSP 1 Score: 69.7 bits (169), Expect = 1.900e-8 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0 Query: 2 MGAELVVGVLSNSLGMLGDAGHMLADGREGGI----------ARTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLV 102 M ELV G+L+NSL +L DAGHML+D G+ A T + G R + A +IN TL+ ++LY+ YEAY RIL PEV +L AF+GLL+N+L +++ Sbjct: 36 MFVELVGGLLTNSLALLSDAGHMLSDAAALGLSLFAIKLGEKAATSSKTFGYKRFEILAAMINGATLIIISLYIFYEAYHRIL-QPPEVQSLGMLLIAFIGLLVNILAAWIL 146
BLAST of NO24G01150 vs. NCBI_GenBank
Match: OGO19110.1 (hypothetical protein A2144_00545 [Chloroflexi bacterium RBG_16_50_9]) HSP 1 Score: 69.7 bits (169), Expect = 1.900e-8 Identity = 50/113 (44.25%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 1 MMGAELVVGVLSNSLGMLGDAGHMLADGREGGIA----------RTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLV 102 +M AE+V G+LSNSL +LGDAGHML DG G++ T + G RV + A L N +TLV VA Y+ YEAY R L P V +L A LGL+ N+ G+ L+ Sbjct: 26 IMLAEVVGGILSNSLALLGDAGHMLVDGLAVGLSLFAITMAARPATLSKTYGYHRVEIMAALANGVTLVLVAAYIFYEAYQRFL-DPPVVRAPLMLVVASLGLVANLAGMLLL 137
BLAST of NO24G01150 vs. NCBI_GenBank
Match: OGW35933.1 (hypothetical protein A2X58_12140 [Nitrospirae bacterium GWC2_56_14]) HSP 1 Score: 68.2 bits (165), Expect = 5.600e-8 Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 0 Query: 1 MMGAELVVGVLSNSLGMLGDAGHMLADG----------REGGIARTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLV 102 MM AELV G+LSNSL +L DAGHML D + + T RR G R+ + A LIN + LV +++Y++YEAY RIL P G +L A +GL+ N++G ++ Sbjct: 1 MMVAELVGGLLSNSLALLSDAGHMLTDNAALLLSFFAMKFATMPATDRRTFGFYRLEILAALINGVILVLISVYIIYEAYQRILDPQPVQG-TLMLVVAIIGLVANIIGALVL 112
BLAST of NO24G01150 vs. NCBI_GenBank
Match: WP_053362932.1 (cation transporter [Bacillus sp. FJAT-27251]) HSP 1 Score: 67.4 bits (163), Expect = 9.500e-8 Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 0 Query: 2 MGAELVVGVLSNSLGMLGDAGHMLADGREGGIA----------RTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLV 102 M ELV GVL+NSL +L DAGHML+D G++ T + G R + A +IN TL+ +++Y+ YEAY RIL PEV +L AF GLL+N+L +++ Sbjct: 36 MFVELVGGVLTNSLALLSDAGHMLSDAAALGLSLFAIKLGEKTATSSKTFGYKRFEILAAMINGATLIIISVYIFYEAYHRIL-QPPEVQSLGMLLIAFTGLLVNILAAWIL 146
BLAST of NO24G01150 vs. NCBI_GenBank
Match: WP_090925392.1 (cation transporter [Salibacterium qingdaonense] >SFL55254.1 cobalt-zinc-cadmium efflux system protein [Salibacterium qingdaonense]) HSP 1 Score: 67.4 bits (163), Expect = 9.500e-8 Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 0 Query: 2 MGAELVVGVLSNSLGMLGDAGHMLADG------------REGGIARTRRRKRGRVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLVHDLG 106 M E + G+++NSL +L DAGHML+D E ++R++ R + A L N TL+ +ALY++YEAY R + P+V +L FLGLL+N+L +++ G Sbjct: 29 MIVEAIGGIITNSLALLSDAGHMLSDSISLGVGLAAFIVGEKAVSRSKTFGYKRFEILAALFNGATLIAIALYIMYEAYQRFI-DPPDVASVGMLFIGFLGLLVNILVAWMLMSKG 143
BLAST of NO24G01150 vs. NCBI_GenBank
Match: WP_077923914.1 (cation transporter [Spirosoma sp. 209]) HSP 1 Score: 67.4 bits (163), Expect = 9.500e-8 Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 0 Query: 5 ELVVGVLSNSLGMLGDAGHMLADGREGGIAR----------TRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLV 102 E+VVG +NSL +L DA HML D +A T RR G R+ + + +N++ L+G++LY+L+EAY R P V +++ AF+GLLINVLGI+L+ Sbjct: 33 EVVVGYWTNSLALLSDAAHMLTDVIGLALALFANWMSRRPITARRSYGFYRLEILSAFVNALILIGISLYILFEAYGR-FRNPPTVDSSNMTLVAFVGLLINVLGIYLL 140
BLAST of NO24G01150 vs. NCBI_GenBank
Match: WP_021346758.1 (cation transporter [Elizabethkingia anophelis] >EQB93851.1 cation transporter [Elizabethkingia anophelis 502]) HSP 1 Score: 67.0 bits (162), Expect = 1.200e-7 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0 Query: 4 AELVVGVLSNSLGMLGDAGHMLADG----------REGGIARTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLVHDLGALTQSSRGS 115 AE++ G+++NSL +L DA HML D R G T + G R + A +IN++ L+G+++Y+LYEAY R L PEV +L A +GLL+N+ GI ++ + + +G+ Sbjct: 32 AEVIGGIITNSLALLADAAHMLTDVVGLLLAYIAIRIGERKATSSKTFGYYRTEILAAVINAVVLLGISVYVLYEAYQRFL-NPPEVQSKAMLIVAGIGLLVNIAGIMILRKSSGDSLNMKGA 153
BLAST of NO24G01150 vs. NCBI_GenBank
Match: WP_034848401.1 (cation transporter [Elizabethkingia anophelis] >AQW95857.1 cation transporter [Elizabethkingia anophelis] >OPB53633.1 cation transporter [Elizabethkingia anophelis]) HSP 1 Score: 67.0 bits (162), Expect = 1.200e-7 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0 Query: 4 AELVVGVLSNSLGMLGDAGHMLADG----------REGGIARTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLVHDLGALTQSSRGS 115 AE++ G+++NSL +L DA HML D R G T + G R + A +IN++ L+G+++Y+LYEAY R L PEV +L A +GLL+N+ GI ++ + + +G+ Sbjct: 32 AEVIGGIITNSLALLADAAHMLTDVVGLLLAYIAIRIGERKATSSKTFGYYRTEILAAVINAVVLLGISVYVLYEAYQRFL-NPPEVQSKAMLIVAGIGLLVNIAGIMILRKSSGDSLNMKGA 153
BLAST of NO24G01150 vs. NCBI_GenBank
Match: ETI54621.1 (hypothetical protein F443_02589 [Phytophthora parasitica P1569]) HSP 1 Score: 66.6 bits (161), Expect = 1.600e-7 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 0 Query: 2 MGAELVVGVLSNSLGMLGDAGHMLADGREGGIARTR------------RRKRGRVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLVHD 104 M EL VG+ +NSLG++GDAGHML D I GRV + +G +NS+ L+ V+ +++ EA R + PEV HLL T+ GL++N++G+F HD Sbjct: 357 MFVELAVGLYTNSLGLMGDAGHMLFDNGALVIGLVASYIGQLPPDAQFTYGYGRVEVLSGFLNSLLLLVVSFHLITEAASRFM-DPPEVTTDHLLLTSIAGLIVNLVGLFFFHD 469 The following BLAST results are available for this feature:
BLAST of NO24G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01150 ID=NO24G01150|Name=NO24G01150|organism=Nannochloropsis oceanica|type=gene|length=2420bpback to top protein sequence of NO24G01150.2 >NO24G01150.2-protein ID=NO24G01150.2-protein|Name=NO24G01150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=329bpback to top protein sequence of NO24G01150.1 >NO24G01150.1-protein ID=NO24G01150.1-protein|Name=NO24G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bpback to top Synonyms
Publications
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