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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr24 | genome | chr24:318607..321026 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO24G01150.2 vs.
Match: WP_046524687.1 (cation transporter [Bacillus campisalis]; KKK37144.1 zinc transporter ZitB [Bacillus campisalis]) HSP 1 Score: 70.1 bits (170), Expect = 1.500e-8 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 2 MGAELVVGVLSNSLGMLGDAGHMLADGREGGI----------ARTRRRKRG--RVGLWAGLINSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFLV 102
M ELV G+L+NSL +L DAGHML+D G+ A T + G R + A +IN TL+ ++LY+ YEAY RIL PEV +L AF+GLL+N+L +++
Sbjct: 36 MFVELVGGLLTNSLALLSDAGHMLSDAAALGLSLFAIKLGEKAATSSKTFGYKRFEILAAMINGATLIIISLYIFYEAYHRIL-QPPEVQSLGMLLIAFIGLLVNILAAWIL 146
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO24G01150.2 ID=NO24G01150.2|Name=NO24G01150.2|organism=Nannochloropsis oceanica|type=mRNA|length=1637bp
ATGATGGGAGCCGAGCTGGTCGTCGGCGTCCTCTCCAATAGTCTCGGCAT
GCTGGGCGACGCCGGCCACATGCTAGCGGATGGGAGGGAGGGAGGGATTG
CGAGGACAAGGAGGAGAAAGAGGGGGAGGGTGGGGCTATGGGCTGGGCTT
ATCAATAGCATTACCCTCGTGGGCGTCGCGCTCTATATGCTCTATGAGGC
CTACGATCGCATCCTCTACACGACGCCTGAGGTCGGTCACGCCCACCTCC
TCCCTACGGCCTTCCTAGGACTCCTGATTAACGTCCTGGGTATTTTCCTA
GTCCACGACCTCGGGGCACTCACACAGAGCAGCAGAGGCAGCAACAGCAG
CACCAACAGCAGCACCAACAGTAGCAGCACCATCATCAGCAGCAGCAGTA
TCGGCAGCAGTAGGATCGGCAGCAGCACCATCAGCAGCAGCAGAAGCAGT
ATTAGCAGCAGTAGCAGTAGCAGCAGTAGCAGTAGCAGCACTTTCAGTCC
CTCCCTCCCTTCCCCCTCCCCTCTCTCTGATTTTAGGACGGAAAGCGGAA
AAGGGGAAGGGTGCTGTTCCCCCTCCCTTCCCTTGTATCCTCCCTCCCTT
CCTCCACATCACCATCACCACCACAAGAACAACCATCACTACAACGGGCA
GCAGCAGCAGCAGCAGCAGCAGTACCAGTGGCAGCCACAGCAGACACACT
GCTGTGCTCACGCCCACCTTGGAAGAGGAGGAGAGGATGAGGGAGTGGAC
GGGGAGGACGAAGCATGGAGAGACCTACTTCTCATGCCTCCTCCTCCTCC
TCCGGCTCATAACAGAAGGGAGGAAGGGGAGGAGGGAGGGAAAGAGGGGG
ACTTGTGGGCGTCCGCCATGATGAAACTTGTACCCAATGCAGACGTCAAC
CTCCAGGTAGCTTTGTCGACCTTCCTTCTTCCCTCCTTCCCTCCCTTCCT
CTCTCTCCCCCTTCGTCATGCTCCTCTCTTTTTATGACTCTCTCCTTTCC
TCCCCACACAATAGGGCCTTGTCCTCCACCTTCTCGCCGATGCCCTCGGC
TCCCTCTCCGTCCTCATCTCCTCCCTCTTGATTCACATCAAGCAGTGGCA
CCTCTCCGACCCCCTCCTTTCCGTCCTCGTCGCCCTCCTCGTCCTCGCTG
CCGCCCTTCCCCACCTACACCGCTCCCTCTCCCTCCTCTTCTTCACCCCA
GCCCTCCCTCCCGCCTTCCATCGGGCCCTTGGCGTGTGCCGGGCAGAGGT
GCAGGCCTCCCTCCCCCTTCCCTCATCCTCCTTCGCTTCCTCTCTCGACT
GGACGAGGACGGTCGATTTTTCCTGTCCATCGTTTTGGTAGAGGAGAGGG
ATGAGGGAGGGACGGAGGAAGGGGTTGTTGAGGAGGGTGGGAGGGAGGGG
GGAGAGAGGAAGGTGTAAGGCGTGTGGTTTTCCGGCATTTGGAGAAGGAG
AGGACGGAGTTGACCATCGACATTCACAGGAGAAGGAAAGGAGAGAGATA
GGGGGCAAATGGAGGGAAGGAAGGAGAGAGTGCCCTGTGAAGAGGAAGGA
GGGAGGGAGGGAGGGAAGGGCTGAAGAAAAGTAAGGAACTAGGAACAGGA
AATAGACGAGAAATGAAAGAACAAATTTACATGATCC back to topprotein sequence of NO24G01150.2 >NO24G01150.2-protein ID=NO24G01150.2-protein|Name=NO24G01150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=329bp
MMGAELVVGVLSNSLGMLGDAGHMLADGREGGIARTRRRKRGRVGLWAGL
INSITLVGVALYMLYEAYDRILYTTPEVGHAHLLPTAFLGLLINVLGIFL
VHDLGALTQSSRGSNSSTNSSTNSSSTIISSSSIGSSRIGSSTISSSRSS
ISSSSSSSSSSSSTFSPSLPSPSPLSDFRTESGKGEGCCSPSLPLYPPSL
PPHHHHHHKNNHHYNGQQQQQQQQYQWQPQQTHCCAHAHLGRGGEDEGVD
GEDEAWRDLLLMPPPPPPAHNRREEGEEGGKEGDLWASAMMKLVPNADVN
LQVALSTFLLPSFPPFLSLPLRHAPLFL* back to topmRNA from alignment at chr24:318607..321026- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO24G01150.2 ID=NO24G01150.2|Name=NO24G01150.2|organism=Nannochloropsis oceanica|type=mRNA|length=2420bp|location=Sequence derived from alignment at chr24:318607..321026- (Nannochloropsis oceanica)
ATGATGGGAGCCGAGCTGGTCGTCGGCGTCCTCTCCAATAGTCTCGGTAG
GGAGGGAGGGGGAGGAAGGAAGTGAAGGAGGGATGGAGGGAAAGGTGAAG
GAAGCGATCGAACCCAAAATATAAGAGAAGAAATGAGCATACAAACTCCG
ACGTTCACCCTCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCTCTCCC
CCCCCCCCTGCAGGCATGCTGGGCGACGCCGGCCACATGCTAGTGGACAA
CGCCTCCCTCCTTCTCGGCCTCTCTGCCTCCCTCTATGCACACCTCCCTC
CTCCCCCTCCTCCTCTCCCCCTCCTTCCCCCCTCGCTTCTCCTTGCACAA
GGCGGATGGGAGGGAGGGAGGGATTGCGAGGACAAGGAGGAGAAAGAGGG
GGAGGGTGGGGCTATGGGCTGGGCTTATCAATAGCATTACCCTCGTGGGC
GTCGCGCTCTATATGCTCTATGGTACACCCTCCCTCCCTCCCTTCCTCCC
TCTCCCGTCTCCTCTTGTCGCACTATTTCGTAGTCACACACTCCTTCCTC
CTTCCCCTCCTCCTCTTCCTTCCTTCCCTCCCTCCCTTTTTTCTTCCCTC
AGAGGCCTACGATCGCATCCTCTACACGACGCCTGAGGTCGGTCACGCCC
ACCTCCTCCCTACGGCCTTCCTAGGTACCCCCCTCCCTCCCTCCTCCTTC
CCTCCCTCCCTCCCTTTCTCTCTCCCTCCATCCCTTTAATTTGTTTTCCT
CCTCTCACACATTCATCCTCCCTCCTTCCTTTCTTCCCCCCTTTCCCTGA
TTCTATTATTCTCCCCGCTTCGAGTCTTCCTCTTGGGATCAGACGTCTCA
TTTCTACCTCCTCCCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCT
CCCTACCGAAGGACTCCTGATTAACGTCCTGGGTATTTTCCTAGTCCACG
ACCTCGGGGCACTCACACAGAGCAGCAGAGGCAGCAACAGCAGCACCAAC
AGCAGCACCAACAGTAGCAGCACCATCATCAGCAGCAGCAGTATCGGCAG
CAGTAGGATCGGCAGCAGCACCATCAGCAGCAGCAGAAGCAGTATTAGCA
GCAGTAGCAGTAGCAGCAGTAGCAGTAGCAGCACTTTCAGTCCCTCCCTC
CCTTCCCCCTCCCCTCTCTCTGATTTTAGGACGGAAAGCGGAAAAGGGGA
AGGGTGCTGTTCCCCCTCCCTTCCCTTGTATCCTCCCTCCCTTCCTCCAC
ATCACCATCACCACCACAAGAACAACCATCACTACAACGGGCAGCAGCAG
CAGCAGCAGCAGCAGTACCAGTGGCAGCCACAGCAGACACACTGCTGTGC
TCACGCCCACCTTGGAAGAGGAGGAGAGGATGAGGGAGTGGACGGGGAGG
ACGAAGCATGGAGAGACCTACTTCTCATGCCTCCTCCTCCTCCTCCGGCT
CATAACAGAAGGGAGGAAGGGGAGGAGGGAGGGAAAGAGGGGGACTTGTG
GGCGTCCGCCATGATGAAACTTGTACCCAATGCAGACGTCAACCTCCAGG
TAGCTTTGTCGACCTTCCTTCTTCCCTCCTTCCCTCCCTTCCTCTCTCTC
CCCCTTCGTCATGCTCCTCTCTTTTTATGACTCTCTCCTTTCCTCCCCAC
ACAATAGGGCCTTGTCCTCCACCTTCTCGCCGATGCCCTCGGCTCCCTCT
CCGTCCTCAGTGCGTCCCTCCTTCCCTCCCTCCCTCTTTCCCTCCCCATC
TCCCCGCATCCTCCCTCCTTCCCCTCTTCTTGTCTTCACCCTCTCTCTTC
TCATCGATTCTCCTTTCCTCCCTCCTTTCTCCCTCCCTCCCTCCCAAAGT
CTCCTCCCTCTTGATTCACATCAAGCAGTGGCACCTCTCCGACCCCCTCC
TTTCCGTCCTCGTCGCCCTCCTCGTCCTCGCTGCCGCCCTTCCCCACCTA
CACCGCTCCCTCTCCCTCCTCTTCTTCACCCCAGCCCTCCCTCCCGCCTT
CCATCGGGCCCTTGGCGTGTGCCGGGCAGAGGTGCAGGCCTCCCTCCCCC
TTCCCTCATCCTCCTTCGCTTCCTCTCTCGACTGGACGAGGACGGTCGAT
TTTTCCTGTCCATCGTTTTGGTAGAGGAGAGGGATGAGGGAGGGACGGAG
GAAGGGGTTGTTGAGGAGGGTGGGAGGGAGGGGGGAGAGAGGAAGGTGTA
AGGCGTGTGGTTTTCCGGCATTTGGAGAAGGAGAGGACGGAGTTGACCAT
CGACATTCACAGGAGAAGGAAAGGAGAGAGATAGGGGGCAAATGGAGGGA
AGGAAGGAGAGAGTGCCCTGTGAAGAGGAAGGAGGGAGGGAGGGAGGGAA
GGGCTGAAGAAAAGTAAGGAACTAGGAACAGGAAATAGACGAGAAATGAA
AGAACAAATTTACATGATCC back to topCoding sequence (CDS) from alignment at chr24:318607..321026- >NO24G01150.2 ID=NO24G01150.2|Name=NO24G01150.2|organism=Nannochloropsis oceanica|type=CDS|length=987bp|location=Sequence derived from alignment at chr24:318607..321026- (Nannochloropsis oceanica)
ATGATGGGAGCCGAGCTGGTCGTCGGCGTCCTCTCCAATAGTCTCGGCAT
GCTGGGCGACGCCGGCCACATGCTAGCGGATGGGAGGGAGGGAGGGATTG
CGAGGACAAGGAGGAGAAAGAGGGGGAGGGTGGGGCTATGGGCTGGGCTT
ATCAATAGCATTACCCTCGTGGGCGTCGCGCTCTATATGCTCTATGAGGC
CTACGATCGCATCCTCTACACGACGCCTGAGGTCGGTCACGCCCACCTCC
TCCCTACGGCCTTCCTAGGACTCCTGATTAACGTCCTGGGTATTTTCCTA
GTCCACGACCTCGGGGCACTCACACAGAGCAGCAGAGGCAGCAACAGCAG
CACCAACAGCAGCACCAACAGTAGCAGCACCATCATCAGCAGCAGCAGTA
TCGGCAGCAGTAGGATCGGCAGCAGCACCATCAGCAGCAGCAGAAGCAGT
ATTAGCAGCAGTAGCAGTAGCAGCAGTAGCAGTAGCAGCACTTTCAGTCC
CTCCCTCCCTTCCCCCTCCCCTCTCTCTGATTTTAGGACGGAAAGCGGAA
AAGGGGAAGGGTGCTGTTCCCCCTCCCTTCCCTTGTATCCTCCCTCCCTT
CCTCCACATCACCATCACCACCACAAGAACAACCATCACTACAACGGGCA
GCAGCAGCAGCAGCAGCAGCAGTACCAGTGGCAGCCACAGCAGACACACT
GCTGTGCTCACGCCCACCTTGGAAGAGGAGGAGAGGATGAGGGAGTGGAC
GGGGAGGACGAAGCATGGAGAGACCTACTTCTCATGCCTCCTCCTCCTCC
TCCGGCTCATAACAGAAGGGAGGAAGGGGAGGAGGGAGGGAAAGAGGGGG
ACTTGTGGGCGTCCGCCATGATGAAACTTGTACCCAATGCAGACGTCAAC
CTCCAGGTAGCTTTGTCGACCTTCCTTCTTCCCTCCTTCCCTCCCTTCCT
CTCTCTCCCCCTTCGTCATGCTCCTCTCTTTTTATGA back to top
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