NO24G01060, NO24G01060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01060 vs. NCBI_GenBank
Match: CBN78707.1 (Peptidyl-prolyl cis-trans isomerase E [Ectocarpus siliculosus]) HSP 1 Score: 156.0 bits (393), Expect = 8.300e-35 Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 0 Query: 5 PKPKQDNSIIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKD----LGDQLD 124 PK Q +YVGGL+E+ EEILHAAF+PFG+I+EVN+PKD NT RGFGFV FE +DA AAIDNM+GAEL G+VL+ N AKPM+HKLGA AVWS D+W+K L E D GD+L+ Sbjct: 2 PKEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFEVEEDAKAAIDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELE 124
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_019638499.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Branchiostoma belcheri]) HSP 1 Score: 134.0 bits (336), Expect = 3.400e-28 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 0 Query: 13 IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKDLGD 121 I+YVGGL E+ E++LHAAFIPFG+++++NIP D++ RGF FV FE+A+DAAAAIDNM +EL GR ++CN+AKPM+ K G+ KAVWS D W K + D G+ Sbjct: 9 IVYVGGLAEEVDEKVLHAAFIPFGDLVDINIPLDYETQKHRGFAFVEFESAEDAAAAIDNMHESELFGRTIRCNLAKPMKLKEGSMKAVWSDDAWLKKFAGKTLDEGE 116
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_013384927.1 (peptidyl-prolyl cis-trans isomerase E [Lingula anatina]) HSP 1 Score: 133.7 bits (335), Expect = 4.400e-28 Identity = 63/114 (55.26%), Postives = 83/114 (72.81%), Query Frame = 0 Query: 13 IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKDLGDQLDFEE 127 I+YVGGL E+ E+ILHAAFIPFG+I+++NIP D++ RGF FV FE A+DAAAAIDNM +EL GR ++ N+AKPM+ K GA++AVWS D W + E GD+ + EE Sbjct: 7 IVYVGGLAEEVDEKILHAAFIPFGDIVDINIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNDSELFGRTVRTNLAKPMKIKEGASRAVWSEDSWLQEHAGETLSKGDKENEEE 120
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_013384928.1 (peptidyl-prolyl cis-trans isomerase E-like [Lingula anatina]) HSP 1 Score: 132.5 bits (332), Expect = 9.800e-28 Identity = 62/114 (54.39%), Postives = 83/114 (72.81%), Query Frame = 0 Query: 13 IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKDLGDQLDFEE 127 I+YVGGL E+ E+ILHAAFIPFG+I+++NIP D++ RGF FV FE A+DAAAAIDNM +EL GR ++ N+AKPM+ K GA++AVWS D W + E GD+ + +E Sbjct: 7 IVYVGGLAEEVDEKILHAAFIPFGDIVDINIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNDSELFGRTVRTNLAKPMKIKEGASRAVWSEDSWLQEHAGETLSKGDKENEDE 120
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_013786126.1 (peptidyl-prolyl cis-trans isomerase E-like, partial [Limulus polyphemus]) HSP 1 Score: 131.3 bits (329), Expect = 2.200e-27 Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 0 Query: 13 IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKDLGDQ 122 I+YVGGL E+ E++LHAAFIPFG+I+++ IP D++ RGF FV FE A+DAAAAIDNM +EL GR ++ N+AKPM+ K G+T+AVW+ D W K E +L DQ Sbjct: 8 IVYVGGLAEEVDEKVLHAAFIPFGDIVDIQIPLDYETQKHRGFAFVEFELAEDAAAAIDNMNDSELFGRTVRVNLAKPMKIKEGSTRAVWADDTWLKQHAGETLELEDQ 116
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_009046006.1 (hypothetical protein LOTGIDRAFT_205061 [Lottia gigantea] >ESP03333.1 hypothetical protein LOTGIDRAFT_205061 [Lottia gigantea]) HSP 1 Score: 129.0 bits (323), Expect = 1.100e-26 Identity = 58/111 (52.25%), Postives = 80/111 (72.07%), Query Frame = 0 Query: 13 IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKDLGDQLD 124 ++YVGGL E+ ++ILHAAFIPFG++I++NIP D++ RGF FV FE A+DAAAAIDNM +EL GR ++ N+AKPM+ K GA++AVW+ D W + E + D D Sbjct: 11 MVYVGGLAEEVDDKILHAAFIPFGDVIDINIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNDSELFGRTIRVNLAKPMKVKEGASRAVWAEDSWLQQHAGETLEKNDDAD 121
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_002406178.1 (cyclophilin type peptidyl-prolyl cis-trans isomerase, putative [Ixodes scapularis] >EEC03460.1 cyclophilin type peptidyl-prolyl cis-trans isomerase, putative [Ixodes scapularis]) HSP 1 Score: 128.3 bits (321), Expect = 1.900e-26 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 0 Query: 13 IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAE 115 I+YVGGL E+ E++LHAAFIPFG++++V IP D++ RGF FV FE A+DA AAIDNM +EL GR ++ NVAKPM+ K G+T+AVWS D W + E Sbjct: 8 IVYVGGLAEEVDEKVLHAAFIPFGDVVDVQIPLDYETEKHRGFAFVEFEQAEDAVAAIDNMNDSELFGRTIRVNVAKPMKIKEGSTRAVWSEDSWLRQHAGE 109
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_020384173.1 (peptidyl-prolyl cis-trans isomerase E isoform X1 [Rhincodon typus]) HSP 1 Score: 127.9 bits (320), Expect = 2.400e-26 Identity = 55/97 (56.70%), Postives = 77/97 (79.38%), Query Frame = 0 Query: 13 IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFK 110 ++YVGGL E+ E++LHAAFIPFG+I+++ IP D++ RGF F+ FENA+DAAAAIDNM +EL GR ++ N+AKPM+ K G+++AVWS D+W K Sbjct: 7 VLYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFIEFENAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRAVWSDDDWLK 103
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_020625738.1 (peptidyl-prolyl cis-trans isomerase E-like [Orbicella faveolata]) HSP 1 Score: 127.9 bits (320), Expect = 2.400e-26 Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 0 Query: 6 KPKQDNS-IIYVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKDLGDQLDFEELVPEAA 133 K K N ++YVGGL E+ E++LHAAFIPFG+I +V IP D+ RGFGFV FE A+DAAAAIDNM +EL GR ++ N+AKPM+ K G ++AVWS D W + + D + EE E + Sbjct: 45 KSKMANKRMVYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYSSQKHRGFGFVEFELAEDAAAAIDNMNESELFGRTIRVNIAKPMKIKEGYSRAVWSEDSWLSKHAGQTLEDADMKNAEEKAKETS 172
BLAST of NO24G01060 vs. NCBI_GenBank
Match: XP_002588702.1 (hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae] >EEN44713.1 hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae]) HSP 1 Score: 127.5 bits (319), Expect = 3.200e-26 Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = 0 Query: 15 YVGGLDEKSTEEILHAAFIPFGNIIEVNIPKDFKENTTRGFGFVHFENADDAAAAIDNMEGAELLGRVLKCNVAKPMQHKLGATKAVWSTDEWFKTQLAEDKDLGD 121 + GGL E+ E++LHAAFIPFG+++++NIP D++ RGF FV FE A+DAAAAIDNM +EL GR ++CN+AKPM+ K G+ KAVWS D W K + D G+ Sbjct: 4 FPGGLAEEVDEKVLHAAFIPFGDLVDINIPLDYETQKHRGFAFVEFEGAEDAAAAIDNMHESELFGRTIRCNLAKPMKLKEGSMKAVWSEDSWLKKFAGKSLDEGE 109 The following BLAST results are available for this feature:
BLAST of NO24G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01060 ID=NO24G01060|Name=NO24G01060|organism=Nannochloropsis oceanica|type=gene|length=1127bpback to top protein sequence of NO24G01060.1 >NO24G01060.1-protein ID=NO24G01060.1-protein|Name=NO24G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=135bpback to top Synonyms
Publications
|