NO24G01050, NO24G01050 (gene) Nannochloropsis oceanica

Overview
NameNO24G01050
Unique NameNO24G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1072
Alignment locationchr24:292309..293380 +

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Properties
Property NameValue
DescriptionYebC-related
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:292309..293380 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029072YebC-like
IPR002876Transcrip_reg_TACO1-like
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Homology
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_016523258.1 (YebC/PmpR family DNA-binding transcriptional regulator [Treponema medium] >EPF28615.1 YebC/PmpR family DNA-binding regulatory protein [Treponema medium ATCC 700293])

HSP 1 Score: 190.3 bits (482), Expect = 8.000e-45
Identity = 112/267 (41.95%), Postives = 156/267 (58.43%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHN 269
            MSGHSKW+ IK AKG+ DAKR  +FTK   E++ A+R   GD   + RL  AI KA+A N+PKDNIE AIK+G    G  + E + YEG  PG  A+++E LTDN+ R A NVR+ FSKNGG LG++GSVA+MF R+G++E   E       EE L+++ALEAGAED+           + E  +  V  +P   A V + L+E+G+     + + VP T++                       +++L ++E LEED DVQNV+ N
Sbjct:    1 MSGHSKWATIKHAKGAADAKRGQMFTKFIKEISIAARMGGGDPNGNPRLRTAILKARAANMPKDNIERAIKKGTGELGGASYEELLYEGYAPGGVAVLVEVLTDNKNRAAANVRNLFSKNGGNLGATGSVAYMFNRKGVIEYDAE----AVSEEKLMEEALEAGAEDI-----------QTEGGIITVTTDPNDFASVLEALQEKGFESVSAEISMVPATYMSLEAETI----------------RKVLKMVERLEEDDDVQNVYTN 236          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_009656683.1 (YebC/PmpR family DNA-binding transcriptional regulator [Selenomonas sp. FOBRC6] >EJO21343.1 DNA-binding regulatory protein, YebC/PmpR family [Selenomonas sp. FOBRC6])

HSP 1 Score: 189.9 bits (481), Expect = 1.000e-44
Identity = 113/267 (42.32%), Postives = 153/267 (57.30%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHN 269
            MSGHSKW+ IKR KG+NDA R  + TK+  E+T A R   GD T ++RL  A+SKAKANN+PKDNI  AI++G+     +N E V YEG GPG TA++++ LTDNR RTA +VRH FSK GG LG  G VAWMF ++ +  +    RE    E+ALL+  LEAGAED+  + +           V  +  EP A   +   L E+G   +  +   VP T V                       +++ TL++ALE++ DVQNV+ N
Sbjct:    1 MSGHSKWANIKRKKGANDAIRGKITTKIGREITIAVRMGGGDPTGNMRLKLALSKAKANNIPKDNINRAIQKGLGATEGSNYEEVLYEGYGPGGTAVMLDILTDNRNRTAADVRHLFSKYGGNLGQDGCVAWMFKKKAVFIVE---REAFDDEDALLEIVLEAGAEDMRAEDD-----------VFEIIAEPEAFEAIETVLGEKGIETASAEVTMVPDTTVHLAD----------------KDAEKMQTLIDALEDNDDVQNVYSN 237          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_011564299.1 (YebC/PmpR family DNA-binding transcriptional regulator [Rubrobacter xylanophilus] >Q1AWE6.1 RecName: Full=Probable transcriptional regulatory protein Rxyl_1318 >ABG04282.1 protein of unknown function DUF28 [Rubrobacter xylanophilus DSM 9941])

HSP 1 Score: 189.9 bits (481), Expect = 1.000e-44
Identity = 120/268 (44.78%), Postives = 158/268 (58.96%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGV-EGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHN 269
            MSGHSKWS IKR KG+ DAKR  LF KL+  +T A+R+  GD  ++  LA A+ KAK  N+P DNI+ AI RG   G  + + E +TYEG  PG  A+++E LTDNR R A ++R+ FSK+GG LG+SGSVA++F R+G+V +P +      GEE L++ ALEAGAEDVE D  + W          RV  EP     VR+GLEE G R    Q +  P   V+                   S  +Q L L++ALEE+ DVQ V+ N
Sbjct:    1 MSGHSKWSTIKRKKGAMDAKRGALFAKLSRAITVAAREGGGDPEANPALALAVQKAKDANMPNDNIQRAIDRGTGAGSEAGDYEHITYEGYAPGGVAVMVEVLTDNRNRAASDIRYIFSKHGGKLGTSGSVAYLFERKGVVLVPAD----AVGEEELMEAALEAGAEDVELD-GDHW----------RVTTEPSEFMAVRQGLEEAGIRYESAQLSMEPMNTVKLD----------------ASTARQTLRLIDALEENDDVQEVYAN 237          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_044013307.1 (YebC/PmpR family DNA-binding transcriptional regulator [Treponema sp. OMZ 838] >AIW88673.1 transcriptional regulator [Treponema sp. OMZ 838])

HSP 1 Score: 189.5 bits (480), Expect = 1.400e-44
Identity = 112/267 (41.95%), Postives = 156/267 (58.43%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHN 269
            MSGHSKW+ IK AKG+ DAKR  +FTK   E++ A+R   GD   + RL  AI KA+A N+PKDNIE AIK+G    G  + E + YEG  PG  A+++E LTDN+ R A NVR+ FSKNGG LG++GSVA+MF R+G++E   E       EE L+++ALEAGAED++ D             +  V  +P   A V + L+E+G+     + + VP T++                       +++L ++E LEED DVQNV+ N
Sbjct:    1 MSGHSKWATIKHAKGAADAKRGQMFTKFIKEISIAARMGGGDPNGNPRLRTAILKARAANMPKDNIERAIKKGTGELGGASYEELLYEGYAPGGVAVLVEVLTDNKNRAAANVRNLFSKNGGNLGATGSVAYMFNRKGVIEYDAE----VVSEEKLMEEALEAGAEDIQAD-----------GGIITVTTDPNDFASVLEALQEKGFESVSAEVSMVPATYMSLEAETI----------------RKVLKMVERLEEDDDVQNVYTN 236          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: EGK14637.1 (glucose-1-phosphate adenylyltransferase [Desmospora sp. 8437])

HSP 1 Score: 189.1 bits (479), Expect = 1.800e-44
Identity = 117/270 (43.33%), Postives = 152/270 (56.30%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHNARL 272
            M+GHSKW  I+  KG  DA R  LF KLA E++ A+R+  GD   + RL  AISKA++ N+P DNIE AI RG   +G +N EAVTYEG GPG  A++ EALTDNR RTA +VRH FSK GG++G +G VAWMF ++GL+ I    RE G+ E+ ++   LEAGAED        +E  ED   +T     P     V+  LE  G+  S  +   VP   V                        Q+L LLEALE+  D+QNV+ N  +
Sbjct:   27 MAGHSKWKNIQHRKGRQDALRGKLFAKLAREISVAAREGGGDPDQNQRLRLAISKARSQNMPNDNIERAIHRGTGAEGGSNYEAVTYEGYGPGGAAVMAEALTDNRNRTAADVRHIFSKRGGSMGEAGCVAWMFDKKGLLRI---DREAGQDEDEMMLQVLEAGAED--------FEASEDAFEIT---TSPDQFEEVKASLEGEGFHFSTAEVTMVPQNTVTLTGDQV----------------TQMLQLLEALEDHDDIQNVYANVEI 266          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_040387103.1 (MULTISPECIES: YebC/PmpR family DNA-binding transcriptional regulator [Thermoactinomycetaceae] >SIS81532.1 DNA-binding regulatory protein, YebC/PmpR family [Kroppenstedtia eburnea])

HSP 1 Score: 189.1 bits (479), Expect = 1.800e-44
Identity = 117/270 (43.33%), Postives = 152/270 (56.30%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHNARL 272
            M+GHSKW  I+  KG  DA R  LF KLA E++ A+R+  GD   + RL  AISKA++ N+P DNIE AI RG   +G +N EAVTYEG GPG  A++ EALTDNR RTA +VRH FSK GG++G +G VAWMF ++GL+ I    RE G+ E+ ++   LEAGAED        +E  ED   +T     P     V+  LE  G+  S  +   VP   V                        Q+L LLEALE+  D+QNV+ N  +
Sbjct:    1 MAGHSKWKNIQHRKGRQDALRGKLFAKLAREISVAAREGGGDPDQNQRLRLAISKARSQNMPNDNIERAIHRGTGAEGGSNYEAVTYEGYGPGGAAVMAEALTDNRNRTAADVRHIFSKRGGSMGEAGCVAWMFDKKGLLRI---DREAGQDEDEMMLQVLEAGAED--------FEASEDAFEIT---TSPDQFEEVKASLEGEGFHFSTAEVTMVPQNTVTLTGDQV----------------TQMLQLLEALEDHDDIQNVYANVEI 240          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_069180476.1 (YebC/PmpR family DNA-binding transcriptional regulator [Selenomonas sp. oral taxon 920] >AOH47877.1 transcriptional regulator [Selenomonas sp. oral taxon 920])

HSP 1 Score: 189.1 bits (479), Expect = 1.800e-44
Identity = 112/267 (41.95%), Postives = 154/267 (57.68%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHN 269
            MSGHSKW+ IKR KG+NDA R  + TK+  E+T A R   GD T ++RL  A+SKAKANN+PKDNI  AI++G+     +N E + YEG GPG TA++++ LTDNR RTA +VRH FSK GG LG  G VAWMF ++ +  +    RE    E+ALL+  LEAGAED+  + +           V  +  EP A   + + L E+G   +  +   VP T V                       +++ TL++ALE++ DVQNV+ N
Sbjct:    1 MSGHSKWANIKRKKGANDAIRGKITTKIGREITIAVRMGGGDPTGNMRLKLALSKAKANNIPKDNINRAIQKGLGATEGSNYEELFYEGYGPGGTAVMLDILTDNRNRTAADVRHLFSKYGGNLGQDGCVAWMFKKKAVFIVE---REAFDDEDALLEIVLEAGAEDMRAEDD-----------VFEIVAEPEAFEAIEEVLGEKGIETASAEVTMVPDTTVRLAD----------------KDAEKMQTLIDALEDNDDVQNVYSN 237          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: OWZ17719.1 (Transcriptional regulator [Phytophthora megakarya])

HSP 1 Score: 189.1 bits (479), Expect = 1.800e-44
Identity = 110/262 (41.98%), Postives = 153/262 (58.40%), Query Frame = 0
Query:   12 IKRAKGSNDAKRAILFTKLAVELTEASRQAKGDTSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGL--VEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLT---LLEALEEDPDVQNVFHN 269
            I+  K + DAKR     KLA E+   S+   GD +++RL AA++KAKA N+PKD IE AIKRGV+GK  +N EAV YE  GP  +A++IE LTDN++RTAP +RH   K+ G LG++G+VAWMF R+G   +E+PE+G      E+ +++ ALEAGA+DV      E  EG     + +V C+P  LA VRKG  E G  P++ +  Y P  +++                     G Q  T   L++AL ED DV  + HN
Sbjct:    7 IQGKKNATDAKRTATNAKLAREIMVISKSVGGDANNVRLVAAVNKAKAANMPKDKIEAAIKRGVDGKDGSNAEAVLYEATGPAGSALMIETLTDNKRRTAPALRHILGKHNGALGTNGAVAWMFERKGYLEIELPEDGNMPAMDEDTVMEIALEAGADDV------EMREG-----LAQVTCDPSELASVRKGFTEAGLEPAISELIYNPKEFLDL-------------------DGDQRETFDKLVDALNEDEDVNQIHHN 238          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_004869364.1 (YebC/PmpR family DNA-binding transcriptional regulator [Acidithiobacillus caldus] >AEK59440.1 conserved hypothetical protein [Acidithiobacillus caldus SM-1] >AIA56483.1 hypothetical protein YebC [Acidithiobacillus caldus ATCC 51756] >OFC35709.1 transcriptional regulator [Acidithiobacillus caldus] >OFC40085.1 transcriptional regulator [Acidithiobacillus caldus] >OFC40817.1 transcriptional regulator [Acidithiobacillus caldus] >OFC54736.1 transcriptional regulator [Acidithiobacillus caldus] >AUW33806.1 YebC/PmpR family DNA-binding transcriptional regulator [Acidithiobacillus caldus])

HSP 1 Score: 188.3 bits (477), Expect = 3.100e-44
Identity = 116/270 (42.96%), Postives = 155/270 (57.41%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHNARL 272
            M+GHSKW+ IK  K + DAK+  +FT+L  E+T A+R   GD +S+ RL  A+ KA ANN+ KD +E AIKRG       + E VTYEG GP   AI+IE +TDNR RT   +RH FSK GG LG+SGSVA++F RRG++ +  +      GE+ +L+ ALEAGAEDV            ++ R+  VY E  AL GV + L+  G  P  ++   +P T VE                       +L+ LLEALEE+ DVQNV+ N  L
Sbjct:    1 MAGHSKWANIKFRKAAQDAKKGKIFTRLIREITVAARAGGGDASSNPRLRTALDKAYANNMAKDTVERAIKRGTGELEGVDYEEVTYEGYGPSGVAILIETMTDNRVRTVAEIRHIFSKRGGNLGTSGSVAYLFQRRGMISLAAD-----VGEDRVLEAALEAGAEDVV----------TEDGRIV-VYTEATALHGVAEALQNAGLTPEEIELTMIPETTVEVSG----------------DDADKLMRLLEALEENDDVQNVYANYSL 238          
BLAST of NO24G01050 vs. NCBI_GenBank
Match: WP_002698872.1 (YebC/PmpR family DNA-binding transcriptional regulator [Treponema phagedenis] >EFW37710.1 DNA-binding regulatory protein, YebC/PmpR family [Treponema phagedenis F0421])

HSP 1 Score: 188.3 bits (477), Expect = 3.100e-44
Identity = 112/267 (41.95%), Postives = 156/267 (58.43%), Query Frame = 0
Query:    3 MSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGD-TSDIRLAAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIIIEALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREKGRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVRKGLEERGWRPSLVQFAYVPTTWVEXXXXXXXXXXXXXXXVAVVSPGQQLLTLLEALEEDPDVQNVFHN 269
            MSGHSKW+ IK AKG+ DAKR  +FTK   E++ A+R   GD  ++ RL  AI KA+A N+PKDNIE AIK+G    G +N E + YEG  PG  AI++E LTDN+ R A NVR+ FSKNGG LGS+GSVA+MF R+G++E   E       EEA++D ALEAGAED+           ++E  +  V  +P     V + L+ +G      + + VP T++                       +++L +++ +EED DVQNV+ N
Sbjct:    1 MSGHSKWATIKHAKGAADAKRGQMFTKFIKEISIAARMGGGDPAANPRLRTAILKARAANMPKDNIERAIKKGTGELGGSNYEELIYEGYAPGGVAILVEVLTDNKNRAAANVRNLFSKNGGNLGSTGSVAYMFNRKGVIEYDAE----VASEEAVMDAALEAGAEDI-----------QNEGGIITVTTDPNDFETVLEALQTKGLESVSAEISMVPDTYMSLD----------------AETTRKVLKMIDRIEEDDDVQNVYSN 236          
The following BLAST results are available for this feature:
BLAST of NO24G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_016523258.18.000e-4541.95YebC/PmpR family DNA-binding transcriptional regul... [more]
WP_009656683.11.000e-4442.32YebC/PmpR family DNA-binding transcriptional regul... [more]
WP_011564299.11.000e-4444.78YebC/PmpR family DNA-binding transcriptional regul... [more]
WP_044013307.11.400e-4441.95YebC/PmpR family DNA-binding transcriptional regul... [more]
EGK14637.11.800e-4443.33glucose-1-phosphate adenylyltransferase [Desmospor... [more]
WP_040387103.11.800e-4443.33MULTISPECIES: YebC/PmpR family DNA-binding transcr... [more]
WP_069180476.11.800e-4441.95YebC/PmpR family DNA-binding transcriptional regul... [more]
OWZ17719.11.800e-4441.98Transcriptional regulator [Phytophthora megakarya][more]
WP_004869364.13.100e-4442.96YebC/PmpR family DNA-binding transcriptional regul... [more]
WP_002698872.13.100e-4441.95YebC/PmpR family DNA-binding transcriptional regul... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01050.1NO24G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558477gene_7335Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101286g2gene9344Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01050.1NO24G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01050 ID=NO24G01050|Name=NO24G01050|organism=Nannochloropsis oceanica|type=gene|length=1072bp
ATGATGATGTCTGGCCATTCCAAGTGGTCCAAAATCAAGCGCGCCAAAGG
CTCCAACGACGgtacgtctccgtgaagtgcagcattaattttgccaggct
gtgaatcttgtaaaaagcttgcctttacccagtcccttacttctcccgcc
ctcccttccttccttccttccttcctcccaagCTAAACGCGCAATCCTCT
TCACCAAGCTTGCTGTCGAGCTAACCGAGGCCTCGCGTCAAGCCAAGGGC
GACACGTCCGACATTCGTCTTGCCGCTGCCATCAGTAAGGCCAAGGCAAA
CAATGTGCCCAAAGACAACATCGAAGGCGCGATAAAGAGAGGGGTGGAAG
GGAAAGGCTCCACGAACATGGAAGCGgtgcgtatgtttgcggcaggagct
tgcatttcttctgtatctcatttgtctgctcgtttctttcctctctacgt
ccctgcgcttcctccctcatttatcccaatgtccctccctccatccctcc
ttgcgcagGTGACATATGAAGGCATCGGTCCCGGCTCCACGGCCATCATC
ATCGAAGCTCTAACTGACAACCGCAAGAGGACCGCACCAAACGTACGACA
TGCCTTCAGTAAGAATGGAGGAACACTTGGATCGAGCGGAAGCGTTGCTT
GGATGTTCGTGAGAAGGGGGTTGGTGGAGATACCGGAGGAAGGGAGGGAG
AAAGGGAGGGGCGAGGAGGCTTTGTTGGACGATGCCTTGGAAGCGGGGGC
GGAGGACGTGGAGGGAGACCCGGAGGAGGAATGGGAGGAGGGGGAGGATG
AACCGCGGGTGACAAGAGTGTATTGTGAGCCGGGGGCACTGGCAGGAGTG
CGAAAGGGGTTGGAGGAGAGAGGCTGGAGGCCGTCCTTGGTCCAGTTCGC
GTACGTGCCCACCACCTGGGTGGAGGTGGAGGTGGAGGAGGAGGAAGGGA
AGGAGAGGGAGAAGGGGAAGGTGGCGGTTGTGTCGCCAGGGCAGCAGCTG
CTGACGCTACTGGAGGCGCTGGAGGAGGACCCCGATGTGCAGAATGTCTT
TCATAACGCGCGGCTTATTTGA
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protein sequence of NO24G01050.1

>NO24G01050.1-protein ID=NO24G01050.1-protein|Name=NO24G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bp
MMMSGHSKWSKIKRAKGSNDAKRAILFTKLAVELTEASRQAKGDTSDIRL
AAAISKAKANNVPKDNIEGAIKRGVEGKGSTNMEAVTYEGIGPGSTAIII
EALTDNRKRTAPNVRHAFSKNGGTLGSSGSVAWMFVRRGLVEIPEEGREK
GRGEEALLDDALEAGAEDVEGDPEEEWEEGEDEPRVTRVYCEPGALAGVR
KGLEERGWRPSLVQFAYVPTTWVEVEVEEEEGKEREKGKVAVVSPGQQLL
TLLEALEEDPDVQNVFHNARLI*
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Synonyms
Publications