NO24G01000, NO24G01000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01000 vs. NCBI_GenBank
Match: EWM21085.1 (thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 428.7 bits (1101), Expect = 1.600e-116 Identity = 210/314 (66.88%), Postives = 246/314 (78.34%), Query Frame = 0 Query: 17 PCCVRPGGCTASAPAVPPLTSTNGSGITTNQASMQGPPMPLSEAKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSWDLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPLVVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGKRV 331 PC TASAPA P + SG + PMPLSEAKRWFVCRAP+P+AKYRM+CLAWAGGNS+IYR+WDLG ++E VAVELPGRNAR++ETPLKNF ++V+R++ A++V+GYLP SA S KPLLLFGHSFGAML THLAQALR+R E E K V+VPLV++SGMAPLD RGGSTGVS MSDD MI YLV+MGGIP EVA++RELMN+FLPAFRGDYTAIDNY Y+P P LPFRL+ FAG DARA K IMEGW K T+H ++FAV+VFPGGHFFIKEHTS+VLER+G+RV Sbjct: 14 PCSTTAATVTASAPAPPSANTGCHSGSKPPAGKLIQAPMPLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERRE------DEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRV 321
BLAST of NO24G01000 vs. NCBI_GenBank
Match: EWM29817.1 (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 177.9 bits (450), Expect = 5.100e-41 Identity = 97/258 (37.60%), Postives = 143/258 (55.43%), Query Frame = 0 Query: 59 EAKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSWDLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPLVVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIK 317 EA++W + K A+ R++C +AGGNS Y++WD+ + E V VELPGRNAR E + + +I +I AL +GY+ S PL+ FGHSFGA+++T +AQ LR++ +V+SG PL R G S +DD ++ L++MGGI E+A NR+++ FLPA +GDY A+D Y Y PPL ++ +D R + E W +FT+ +EF +FPGGHFF+K Sbjct: 134 EARKWLSVKR-KDFARVRLVCFPYAGGNSNFYKTWDV-KEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYI--------------ESKIPLVFFGHSFGAIVSTLVAQILRNQYN-----------YTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTT--KEFESRIFPGGHFFLK 362
BLAST of NO24G01000 vs. NCBI_GenBank
Match: CBN76062.1 (fatty acid-ACP thioesterase [Ectocarpus siliculosus]) HSP 1 Score: 166.0 bits (419), Expect = 2.000e-37 Identity = 99/285 (34.74%), Postives = 145/285 (50.88%), Query Frame = 0 Query: 55 MPLSEAKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSW--DLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPL-VVLSGMAPLD---ARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFP-----PLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIK-EHTSLVLERLG 328 M S ++W CR K A R+ C AWAGG+++ + W L +E A+ELPGR R +E L + IV + QAL MG L KP LFGHSFG+++ LA+ L+ E ++P+ +++SG P D G S +S++ D ++D+L+ +GG+P E+ EL++ FLP R DYTA + Y Y P P+ +IC G ED RA + +E W T+ EF +++F GGHFF++ E VL LG Sbjct: 1 MSSSALEKWVACRRVKADASIRLFCAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLD----------------KPFALFGHSFGSLVMFELARKLK------------EDAGKIPVYLIVSGCCPPDMCVGGGSSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYELRPGDDSRPITCPIICLGGEEDGRAPRSDLERWSSLTA--AEFRLQMFGGGHFFLQGEGEQAVLTFLG 255
BLAST of NO24G01000 vs. NCBI_GenBank
Match: WP_045872871.1 (MULTISPECIES: thioesterase [Nostocales] >EKE99067.1 putative gramicidin S biosynthesis protein GrsT [Tolypothrix sp. PCC 7601] >BAY94701.1 putative thioesterase [Fremyella diplosiphon NIES-3275]) HSP 1 Score: 154.8 bits (390), Expect = 4.600e-34 Identity = 91/273 (33.33%), Postives = 130/273 (47.62%), Query Frame = 0 Query: 58 SEAKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSW--DLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPLVVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGK 329 S W +C PKPQA R+ C +AGG+S I+R+W L +IE AVE+PGR +IQ P E +V I A + YL KP GHS GA ++ L + LR R+ ++ V L + + AP + + + I+ L + G P EV N ELM +FLP R D+ ++ Y Y+P PL +I F G EDAR ++ W++ T +F++ +FPG HFFI +LE L K Sbjct: 6 SNFNSWIICPQPKPQANLRLFCFPYAGGSSLIFRTWSNSLSSNIEVCAVEIPGRGRQIQFPPFSKIEPLVDAI--ASHIYPYLD----------------KPFAFLGHSMGAWISFELTRLLR----------RKYGIIPVNLFISARRAP-HLPSSEAVIHNLPEADFIEELRHLNGTPSEVLENAELMELFLPILRADFAVLETYIYTPESPLECPIIAFGGLEDARVSFDELQAWQEHTK--ADFSLHMFPGDHFFINSAQLPLLETLTK 247
BLAST of NO24G01000 vs. NCBI_GenBank
Match: WP_070392161.1 (beta-ketoacyl synthase [Moorea producens] >AOW99682.1 beta-ketoacyl synthase [Moorea producens PAL-8-15-08-1]) HSP 1 Score: 154.1 bits (388), Expect = 7.800e-34 Identity = 94/298 (31.54%), Postives = 147/298 (49.33%), Query Frame = 0 Query: 37 STNGSGITTNQAS--MQGPPMPLSEAKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSW--DLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPLVVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGKRV 331 ST S +TN++S M + +A W C P PQAK R+ C +AG ++I+RSW L P+IE +++LPGR R++E P ++ ++QAL + L P P A FGHS GA+++ LA+ LR ++ V + V + AP + + ++ DD I L + G P E N ELM +FLP R D+ ++ Y YS PL + F G D + +E W+K T ++F +++FPG HFF+K H L+L+ + ++ Sbjct: 1034 STTDSMDSTNESSGTMNSSEKVVPQANLWVSCPKPNPQAKLRLFCFPYAGAGASIFRSWLELLPPEIEVCSIQLPGRENRLEEEPFTR----LSPLIQALTPV--LHPYLDIPFA------------FFGHSLGALISFELARELR----------KQNLPSPVHVFVSASSAP-QLPDLNLPIHRLPDDEFIQSLGRLNGTPQETLDNPELMELFLPVLRADFAILETYFYSSADPLDCPITVFGGKSDPKVSDAELEAWRKQTQ--KDFTLQMFPGDHFFLKSHDQLLLDAIASQL 1300
BLAST of NO24G01000 vs. NCBI_GenBank
Match: WP_046279819.1 (thioesterase [Limnoraphis robusta] >KKD36893.1 gramicidin dehydrogenase [Limnoraphis robusta CS-951]) HSP 1 Score: 153.7 bits (387), Expect = 1.000e-33 Identity = 86/273 (31.50%), Postives = 133/273 (48.72%), Query Frame = 0 Query: 63 WFVCRAPKPQAKYRMICLAWAGGNSTIYRSWD--LGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPLVVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGKRVGAL 334 W C P P+AK R+ C +AGG + I+R+W P+IE AVELPGR R++E P + ++ + L + YL KP + GHS G ++ LA+ LR RE + L V AP + ++S+ I+ L G P V N+ELM++ LP+ R D+ ++ YTY PPL F + F G ED + + M+ W++ T+ +F ++ PG HFF+ H SL+L+ L R+ ++ Sbjct: 10 WLTCPEPNPKAKLRLFCFHYAGGGALIFRNWSAYFSPNIELCAVELPGRGKRLREPPYTQLKPLIEAL--TLAIHSYLD----------------KPFVFLGHSMGGLVCFELARQLR----------REYGLSPQHLFVSGCRAP-QIPDPDPPIHQLSNPEFIEELRRYNGTPEAVLQNQELMDLLLPSLRADFAVLETYTYQSEPPLTFDITAFYGLEDKQVSQAEMQAWEQQTT--ADFCLKTLPGDHFFLHSHQSLLLQLLNLRINSI 251
BLAST of NO24G01000 vs. NCBI_GenBank
Match: EWM20990.1 (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 153.3 bits (386), Expect = 1.300e-33 Identity = 102/317 (32.18%), Postives = 153/317 (48.26%), Query Frame = 0 Query: 18 CCVRP---GGCTASAPAVPPLTS-TNGSGITTNQASMQGPPMPLSEAKRWFVCRA-PKPQAKYRMICLAWAGGNSTIYRSWDLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPLVVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYS-PFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGK 329 CC+ P A A P S +T +A + P M + A++W + P AK R+ICL WAG NS ++++WDL E V VELP RNAR + P+ + ++ +I QA VMGYL S PL++FGHSFGAM+ HLA+ + ++E + + G PL G K DD MI +V+ GG+ E+A ++ L++ L + D+ +D Y ++ L L G +D R+ + W ++T+ ++ FPGGHFF+KE + VL LGK Sbjct: 42 CCIPPYVSKAIEVHAAAEPKKASDAPTDSQSTFKAGPRRPVMSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCG-EVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYL--------------ESTTPLVIFGHSFGAMIGLHLARIM-----------KKEYDYTPKMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTC--SIQIKTFPGGHFFLKEKEADVLAWLGK 330
BLAST of NO24G01000 vs. NCBI_GenBank
Match: WP_036843513.1 (MULTISPECIES: thioesterase [Planktothrix] >CAD29792.1 microcystin synthetase associated thioesterase [Planktothrix agardhii NIVA-CYA 126/8] >KEI67172.1 McyT [Planktothrix agardhii NIVA-CYA 126/8] >CUR25344.1 thioesterase putatively associated with nonribosomal peptide biosynthesis [Planktothrix rubescens]) HSP 1 Score: 152.9 bits (385), Expect = 1.700e-33 Identity = 91/272 (33.46%), Postives = 133/272 (48.90%), Query Frame = 0 Query: 60 AKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSW--DLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPL-VVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGK 329 A W P P+AK R+ C +AGG + I+RSW L +E +ELPGRN+R++ETP E ++QALD LP KP FGHS G +++ LA+ LR ++ + PL + +SG + + + + +I L G P V N ELM + LP R D++ ++ Y+Y PPL + F G ED + + +E W++ T+ F+VE+FPG HFF+ SLVLE LGK Sbjct: 14 ANSWVTYPKPNPEAKLRLFCFHYAGGGAAIFRSWIDSLPSTVEICPIELPGRNSRLRETPFTQME----PLIQALD-RAILP-------------HLTKPFAFFGHSMGGLVSFELARLLR------------KEYNQSPLHLFVSGYRAPQIPDRTPQIHALPESELIKELRRYAGTPEAVLENAELMELLLPTLRADFSVVETYSYKDLPPLDCPITAFGGLEDLKPNALEIEAWREQTN--SAFSVEMFPGDHFFLHSAKSLVLECLGK 253
BLAST of NO24G01000 vs. NCBI_GenBank
Match: WP_036833395.1 (MULTISPECIES: thioesterase [Planktothrix]) HSP 1 Score: 152.9 bits (385), Expect = 1.700e-33 Identity = 91/272 (33.46%), Postives = 133/272 (48.90%), Query Frame = 0 Query: 60 AKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSW--DLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPL-VVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGK 329 A W P P+AK R+ C +AGG + I+RSW L +E +ELPGRN+R++ETP E ++QALD LP KP FGHS G +++ LA+ LR ++ + PL + +SG + + + + +I L G P V N ELM + LP R D++ ++ Y+Y PPL + F G ED + + +E W++ T+ F+VE+FPG HFF+ SLVLE LGK Sbjct: 14 ANSWVTYPKPNPEAKLRLFCFHYAGGGAAIFRSWIDSLPSTVEICPIELPGRNSRLRETPFTQIE----PLIQALD-RAILP-------------HLTKPFAFFGHSMGGLVSFELARLLR------------KEYNQSPLHLFVSGYRAPQIPDRTPQIHALPESELIKELRRYAGTPEAVLENAELMELLLPTLRADFSVVETYSYKDLPPLDCPITAFGGLEDLKPNALEIEAWREQTN--SAFSVEMFPGDHFFLHSAKSLVLECLGK 253
BLAST of NO24G01000 vs. NCBI_GenBank
Match: WP_079681567.1 (thioesterase [Planktothrix sp. PCC 11201] >SKB15665.1 thioesterase putatively associated with nonribosomal peptide biosynthesis [Planktothrix sp. PCC 11201]) HSP 1 Score: 152.5 bits (384), Expect = 2.300e-33 Identity = 89/278 (32.01%), Postives = 132/278 (47.48%), Query Frame = 0 Query: 54 PMPLSEAKRWFVCRAPKPQAKYRMICLAWAGGNSTIYRSW--DLGPDIETVAVELPGRNARIQETPLKNFEVIVARIVQALDVMGYLPPSASSPNAXXXXXXSAKPLLLFGHSFGAMLATHLAQALRDRDEARRGKGREEKVVEVPL-VVLSGMAPLDARGGSTGVSKMSDDGMIDYLVEMGGIPFEVASNRELMNIFLPAFRGDYTAIDNYTYSPFPPLPFRLICFAGAEDARADKGIMEGWKKFTSHVEEFAVEVFPGGHFFIKEHTSLVLERLGK 329 P P A W P PQAK R+ C +AGG + I+RSW L +E A+ELPGR++R++ETP E ++ + A+ KP FGHS G +++ LA+ LR ++ + PL + +SG + + + + I L G P V N ELM + LP R D++ ++ Y+Y PPL + F G ED + + +E W++ T+ F+VE+FPG HFF+ SLVLE LGK Sbjct: 8 PNPTLTANSWVTYPKPNPQAKLRLFCFHYAGGGAVIFRSWLDSLPSTVEICALELPGRSSRLRETPFTQMEPLIQTLGPAI------------------FPHLTKPFAFFGHSMGGLVSFELARLLR------------KEYNQSPLHLFVSGYRAPQIPDRTPQIHALPEPEFIKELRRYNGTPEAVLENAELMELLLPTLRADFSVVETYSYKDAPPLDCPITAFGGLEDLKPNALELEAWREQTN--SAFSVEMFPGDHFFLHSAKSLVLESLGK 253 The following BLAST results are available for this feature:
BLAST of NO24G01000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01000 ID=NO24G01000|Name=NO24G01000|organism=Nannochloropsis oceanica|type=gene|length=2375bpback to top protein sequence of NO24G01000.1 >NO24G01000.1-protein ID=NO24G01000.1-protein|Name=NO24G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=201bpback to top protein sequence of NO24G01000.2 >NO24G01000.2-protein ID=NO24G01000.2-protein|Name=NO24G01000.2|organism=Nannochloropsis oceanica|type=polypeptide|length=335bpback to top Synonyms
Publications
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