NO24G00900, NO24G00900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00900 vs. NCBI_GenBank
Match: CBJ30375.1 (ubiquitin-conjugating enzyme 1 [Ectocarpus siliculosus]) HSP 1 Score: 259.2 bits (661), Expect = 1.100e-65 Identity = 135/212 (63.68%), Postives = 154/212 (72.64%), Query Frame = 0 Query: 2 GDFSRIRKELNECARDQKSGVTASPVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALLS 214 GD RIRKEL ECARD SGVTA P G SL L GTI GP GTP+ G F I+I IP+ YPFEPPKMKF TKIWHPNISSQ+GAICLDILKDQWSPALTIKTAL+SLQAL+C+P+PDDPQDAEVA+MY N++ + TAKFWTETYA +V + G E VV R+ DMGF E AR+AL ++WDETAA+N LLS Sbjct: 164 GDAGRIRKELAECARDTDSGVTAVPKGDSLARLEGTILGPVGTPFEGGTFLINIDIPSGYPFEPPKMKFATKIWHPNISSQTGAICLDILKDQWSPALTIKTALLSLQALMCSPEPDDPQDAEVANMYKINRDTYNQTAKFWTETYA-------QVRDPGGNED-------------VVRRVCDMGFPEAQARRALASNDWDETAAINTLLS 355
BLAST of NO24G00900 vs. NCBI_GenBank
Match: XP_009032291.1 (hypothetical protein AURANDRAFT_69594 [Aureococcus anophagefferens] >EGB12630.1 hypothetical protein AURANDRAFT_69594 [Aureococcus anophagefferens]) HSP 1 Score: 246.1 bits (627), Expect = 9.700e-62 Identity = 129/211 (61.14%), Postives = 146/211 (69.19%), Query Frame = 0 Query: 3 DFSRIRKELNECARDQKSGVTASPVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALLS 214 D R++KEL E RD KSGVT S + L G ITGP+GTPY G ++I I IP+ YPFEPPKMKFLTKIWHPNISSQ+GAICLDILKDQWSPALTIKTAL+SLQALLC+P+PDDPQDA+VA MYLN + F TAKFWTETYARP+ E G E+ V RL +MGFS KAL D+ DE AV ALLS Sbjct: 4 DRGRLKKELTELTRDTKSGVTVEVKSSDMMELEGVITGPEGTPYEGGTYQIGITIPSGYPFEPPKMKFLTKIWHPNISSQTGAICLDILKDQWSPALTIKTALLSLQALLCSPEPDDPQDAQVAQMYLNEPDTFKQTAKFWTETYARPK-------EAGAED-------------AAVARLVEMGFSREQVVKALADAKGDENEAVTALLS 194
BLAST of NO24G00900 vs. NCBI_GenBank
Match: XP_002184246.1 (ubiquitin-conjugating enzyme 1 [Phaeodactylum tricornutum CCAP 1055/1] >EEC44424.1 ubiquitin-conjugating enzyme 1 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 241.5 bits (615), Expect = 2.400e-60 Identity = 121/208 (58.17%), Postives = 147/208 (70.67%), Query Frame = 0 Query: 6 RIRKELNECARDQKSGVTASPV-GSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALL 213 R+ KE+ +D SGVTA+ V L HL G+I GP G+PY GVF+IDIHIP YPFEPPKMKFLTK+WHPNISSQ+GAICLDILKDQWSPALTIKTAL+SL AL+C+P+P DPQDAEVA MY+ N+E+F TAKFWTE+YA+P + D + R+ +MGF +AR ALE +W+E+AAVNALL Sbjct: 10 RLLKEVAVVQKDDASGVTATLVTEGQLRHLKGSIQGPSGSPYEGGVFEIDIHIPIEYPFEPPKMKFLTKVWHPNISSQTGAICLDILKDQWSPALTIKTALLSLLALMCSPEPGDPQDAEVAKMYMGNREEFDRTAKFWTESYAKPSSKED-----------------------AISRVCEMGFDRESARNALEKHSWNESAAVNALL 194
BLAST of NO24G00900 vs. NCBI_GenBank
Match: XP_019189451.1 (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Ipomoea nil]) HSP 1 Score: 240.7 bits (613), Expect = 4.100e-60 Identity = 124/215 (57.67%), Postives = 141/215 (65.58%), Query Frame = 0 Query: 1 MGDFSRIRKELNECARD-QKSGVTASPVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALLSS 215 M D R++KEL EC RD Q SG+ SP G SL HLSGTI GP GTPY G FKIDI +P YPFEPPKMKF TK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL P+PDDPQDA VA YL + FL TA++WTE +A+P DE V +L +MGF E R LE WDE AA+ L SS Sbjct: 1 MVDLGRVQKELQECNRDVQVSGIKVSPRGDSLTHLSGTIPGPIGTPYEGGTFKIDITLPDGYPFEPPKMKFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPEPDDPQDAVVAQQYLREYQTFLGTARYWTEAFAKPSLGVDE----------------------KVQKLVEMGFPEAQVRSTLELVGWDENAALERLCSS 193
BLAST of NO24G00900 vs. NCBI_GenBank
Match: GAX09495.1 (ubiquitin-conjugating enzyme [Fistulifera solaris]) HSP 1 Score: 239.6 bits (610), Expect = 9.100e-60 Identity = 123/214 (57.48%), Postives = 151/214 (70.56%), Query Frame = 0 Query: 2 GDFSRIRKELNECARDQKSGVTASPVG-SSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALLSS 215 G R+ KEL E +++ SGV A+PV +L HL T+ GP GT Y G+F+I++ I YPFEPPKMKFLTKIWHPNISSQ+GAICLDILKDQWSPALTIKTAL+SLQAL+C+P+P DPQDAEVA MYL+N+E+F TA+FWTE++A+P S DE V R+ +MGF E +ARKALE WDE+AAVN LL + Sbjct: 3 GANGRLVKELKEVSKNDTSGVRAAPVSEGNLRHLLATVEGPSGTVYEGGIFEINVEIGKQYPFEPPKMKFLTKIWHPNISSQTGAICLDILKDQWSPALTIKTALLSLQALMCSPEPGDPQDAEVAKMYLSNREEFDRTARFWTESFAKP-TSKDE----------------------AVQRVCEMGFDEASARKALEKHKWDESAAVNELLGA 193
BLAST of NO24G00900 vs. NCBI_GenBank
Match: EWM21093.1 (ubiquitin-conjugating enzyme e2 27 [Nannochloropsis gaditana]) HSP 1 Score: 232.6 bits (592), Expect = 1.100e-57 Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0 Query: 1 MGDFSRIRKELNECARDQKSGVTASPVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 118 MGDFSRI+KEL ECA+DQKSGVTASPVGSSLNHLSGTITGPDGTPY KGVFKIDI IPTSYPFEPPKMKF+TKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP Sbjct: 1 MGDFSRIQKELRECAKDQKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQP 117
BLAST of NO24G00900 vs. NCBI_GenBank
Match: CCA27209.1 (ubiquitinconjugating enzyme E2 putative [Albugo laibachii Nc14]) HSP 1 Score: 231.5 bits (589), Expect = 2.500e-57 Identity = 123/215 (57.21%), Postives = 144/215 (66.98%), Query Frame = 0 Query: 1 MGDFSRIRKELNECARD-QKSGVTASPVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALLSS 215 M RI+KEL EC +D Q SGV+AS G SL+HL GTI GP GTPY GVF IDIHIP++YPF PP M+F TKIWHPNISSQ+GAICLDILKDQWSPALTIKTAL+S+ ALL +PDDPQDAEVA MYLN+ E+F+ TA+FWTE++A+ S + ++RL DMGF A AL DE AAV LL S Sbjct: 1 MATRGRIQKELLECQKDLQLSGVSASQNGDSLDHLKGTICGPPGTPYEGGVFHIDIHIPSTYPFAPPTMQFTTKIWHPNISSQTGAICLDILKDQWSPALTIKTALLSILALLSAAEPDDPQDAEVARMYLNDYERFVSTARFWTESFAKESTS--------------------SAMQASIERLVDMGFPSDQAMTALASCQGDENAAVEKLLGS 195
BLAST of NO24G00900 vs. NCBI_GenBank
Match: XP_002295622.1 (ubiquitin-conjugating enzyme [Thalassiosira pseudonana CCMP1335] >ACI64339.1 ubiquitin-conjugating enzyme [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 229.6 bits (584), Expect = 9.400e-57 Identity = 119/214 (55.61%), Postives = 149/214 (69.63%), Query Frame = 0 Query: 5 SRIRKELNE-CARDQKSGVTAS-----PVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALL 213 +R+ KE+ + C D +G+ A+ G S HL GTI+GP+GTPY G F++DI IP YPFEPPKMKF TKIWHPN+SSQ+GAICLDILKDQWSPALTIKTA++SLQALLC+P+P DPQDA+VA MYL+N+ +F TAK+WTE YA + E+KRE + +D++ +MGF +ARKALE WDE AAVN LL Sbjct: 6 TRVNKEITQICLPDATTGIIATLAPDDTPGKSPRHLRGTISGPEGTPYEGGRFEVDILIPKQYPFEPPKMKFETKIWHPNVSSQTGAICLDILKDQWSPALTIKTAMLSLQALLCSPEPSDPQDAQVARMYLDNKAEFDRTAKYWTEMYATIDG----------EKKRE---------DAAIDKVCEMGFDRESARKALEKHKWDEGAAVNDLL 200
BLAST of NO24G00900 vs. NCBI_GenBank
Match: XP_004138029.1 (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis sativus] >KGN63451.1 hypothetical protein Csa_1G000740 [Cucumis sativus]) HSP 1 Score: 228.8 bits (582), Expect = 1.600e-56 Identity = 117/214 (54.67%), Postives = 144/214 (67.29%), Query Frame = 0 Query: 1 MGDFSRIRKELNECARD-QKSGVTASPVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALLS 214 M DF+R++KEL EC +D + SG+ +P SL+HL GTI GP TPY G+F+IDI +P YPFEPPKM+F TK+WHPNISSQSGAICLDILKDQWSPALT+KTAL+S+QALL PQPDDPQDA VA YL + + F TA++WTET+A+ + G EEK V +L +MGF E R +LE WDE A+ L S Sbjct: 1 MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSS-------LGVEEK--------------VQKLMEMGFPEAQVRSSLEAVGWDENLALEKLCS 193
BLAST of NO24G00900 vs. NCBI_GenBank
Match: CCI11036.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 228.8 bits (582), Expect = 1.600e-56 Identity = 122/215 (56.74%), Postives = 144/215 (66.98%), Query Frame = 0 Query: 1 MGDFSRIRKELNECARD-QKSGVTASPVGSSLNHLSGTITGPDGTPYAKGVFKIDIHIPTSYPFEPPKMKFLTKIWHPNISSQSGAICLDILKDQWSPALTIKTALISLQALLCTPQPDDPQDAEVASMYLNNQEQFLHTAKFWTETYARPEASHDEVCEKGEEEKREGEGEFRTFGNLVVDRLKDMGFSETAARKALEDSNWDETAAVNALLSS 215 M R+RKEL EC +D Q SGV+AS G SL HL GTI GP GTPY GVF IDIHIP++YPF PP M+F TKIWHPNISSQ+GAICLDILKDQWSPALTIKTAL+S+ ALL +P+DPQDAEVA MYLN+ ++F+ TA+FWTE++A+ E +E +DRL DMGF +AL DE AAV LL S Sbjct: 1 MATRGRVRKELLECQKDLQLSGVSASQNGDSLEHLKGTICGPPGTPYEGGVFHIDIHIPSTYPFAPPTMQFTTKIWHPNISSQTGAICLDILKDQWSPALTIKTALLSILALLSAAEPNDPQDAEVARMYLNDYDRFVSTARFWTESFAK------ECTSSAMQES--------------IDRLVDMGFPSDQVMRALASCEGDENAAVEKLLGS 195 The following BLAST results are available for this feature:
BLAST of NO24G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00900 ID=NO24G00900|Name=NO24G00900|organism=Nannochloropsis oceanica|type=gene|length=1989bpback to top protein sequence of NO24G00900.3 >NO24G00900.3-protein ID=NO24G00900.3-protein|Name=NO24G00900.3|organism=Nannochloropsis oceanica|type=polypeptide|length=188bpback to top protein sequence of NO24G00900.2 >NO24G00900.2-protein ID=NO24G00900.2-protein|Name=NO24G00900.2|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top protein sequence of NO24G00900.1 >NO24G00900.1-protein ID=NO24G00900.1-protein|Name=NO24G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=215bpback to top Synonyms
Publications
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