NO24G00790, NO24G00790 (gene) Nannochloropsis oceanica

Overview
NameNO24G00790
Unique NameNO24G00790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1863
Alignment locationchr24:227300..229162 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:227300..229162 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL041nonsL041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00790.1NO24G00790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00790.1NO24G00790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00790 ID=NO24G00790|Name=NO24G00790|organism=Nannochloropsis oceanica|type=gene|length=1863bp
ATGGCCACCGTTCGCGAGATGATGGCGCGGCTTCGATCCCCAAGTGCTAC
GTCCCGAGAAGAGCGCAACCGTCAAAGGCGCGGAGGTGCGCTCCGTGAGA
TGTGGTACATTATACGGCAAGCAGAACAGGCTCGTGGTTACGGTCACTTG
GACGACGAGCGTTTGGTAGGGATCGAGGAGGAGGAGGAAGAGGTGGAGGA
GCTGGAGGACGAGGGAGGAAAGCATGCTGCCTCTTTACCGACATCGACAA
GCACGGGGAGACCTCCACTGTCCTATTTATCTCTGCGCATGACCCTACCC
CCGCTGAATCCATCACCGCTTCGAAACGTGGCGCACAGGGAAAGGGAGGA
GGAGAGGAAGATGAAAGAAAAGAGGGAGGAGAAGGAGAAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGCAGGATCAGGAGGAGGAGGAGCAG
GATCTGGAGGAGCAGGAGGAGCACAAGGAGCAGGAGGAAGCGCTAGAACA
TGGGGCCGAGATCGATGTTGAGCATAAATATGTACCTTTGACAGTACCGC
AGTCATCCTCCACCCAGCAGAATGCCCGACAGGAGCCGAAAGAGGTGGTG
GAAGAAGAATTGGATATGATGGAGGAAGAGGAGGTGAAGGAGGAGGATGA
GGAGCGAGTGGCAAACGAGAGGCCACAAGAAGGGAGGGATGGATTTATGA
TGTCTGCTTGTAACCGCGTgtaagtaaataagatttgacgactttggtta
cacacaaggtgtcagcttctgaaatcacctaaagcctacctctttccttc
ttgcctccattcctccctcccccagATCCAGCTCCTTGCATGTGACTTTT
CGGGGAATCATCACAGACCTAGAGGCATCCATGGCCGGTCTCCGAGAGCG
CATGGGCGTCGAGAAGGAAACATTTGAGCCTCATTCAGTACCTGCTCCTC
CTGCTCCGCCCCTCCTCCCCAGCCCGGTCAACCGGGGGCCATGGGGCGGG
GGCGAGGAGGAGCAGAAGCGCGTAGCCTCCAGCAGTCTTGCTGATGAACG
AGACACGACAAATGCCAGTAGCAGCACCAGCAACAATAGCAGCACAAGCA
ACACAAGCAGAACCAGCACCACCACCAGCACGAACACCAGTCGACATAGG
GGCAGGCCCTCTCTAGTCTACGCCAAAAGCTTGCTCGAGGCGTTTCGCGA
GTTCAGgtaagggagagggagagagaggtgggaagtgatgagggaaaagc
aaggacacaatacatacacgggcaagagcgctgtgcagacttgacatgca
cgctcttttcttctgctttccgaattgccgttcggggttggagcacaccg
tatctttctgtctctatccactggttcatgtatcttactattgacatatg
tatgtcttatttacattgaccctatcccagACGCCTCCATCGGCAAGAGG
CCCCTTCCCCCTACTTCGACACCGCATGCTGCTACGCCTCCTGCGCCCAT
CCCCCTTCTCCTCCTCCTCCTCCCCCTCGCCCTCGGCAACAACAACAGCA
GCAGCAGCAGCAACAGCAACAACAACAACAACAACAACAACAACAACAGT
ACCATTACCCATTTTCCTACTCTCCTCCACCTCATCATCTTCCTCCTTCT
TCGTTCCCTCAGCAGCAGCAACACCTCCATTTTTACCACCGACCTCCTTG
CCCTTGCTACCGCAGCTGCTCTAGAGACGGACGAACCGCTCAGCTACGCC
GCCGGGCAAACCACAGTACCACCTCCTGCCCTTCCCACCACTTTCCCGAC
ACGTCTTCCTCTTCCATATTCTCCTCCTCCTCCTGTTCCATCGCCAGCCA
TGACAGGGAGTAA
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protein sequence of NO24G00790.1

>NO24G00790.1-protein ID=NO24G00790.1-protein|Name=NO24G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=511bp
MATVREMMARLRSPSATSREERNRQRRGGALREMWYIIRQAEQARGYGHL
DDERLVGIEEEEEEVEELEDEGGKHAASLPTSTSTGRPPLSYLSLRMTLP
PLNPSPLRNVAHREREEERKMKEKREEKEKEEEEEEEEEEEEQDQEEEEQ
DLEEQEEHKEQEEALEHGAEIDVEHKYVPLTVPQSSSTQQNARQEPKEVV
EEELDMMEEEEVKEEDEERVANERPQEGRDGFMMSACNRVSSSLHVTFRG
IITDLEASMAGLRERMGVEKETFEPHSVPAPPAPPLLPSPVNRGPWGGGE
EEQKRVASSSLADERDTTNASSSTSNNSSTSNTSRTSTTTSTNTSRHRGR
PSLVYAKSLLEAFREFRRLHRQEAPSPYFDTACCYASCAHPPSPPPPPPR
PRQQQQQQQQQQQQQQQQQQQQQYHYPFSYSPPPHHLPPSSFPQQQQHLH
FYHRPPCPCYRSCSRDGRTAQLRRRANHSTTSCPSHHFPDTSSSSIFSSS
SCSIASHDRE*
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Synonyms
Publications