NO24G00460, NO24G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00460 vs. NCBI_GenBank
Match: EWM24302.1 (las1-like family expressed [Nannochloropsis gaditana]) HSP 1 Score: 461.5 bits (1186), Expect = 3.600e-126 Identity = 278/522 (53.26%), Postives = 324/522 (62.07%), Query Frame = 0 Query: 1 MEYTPRVLPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLE---SGLNGSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQAHDLESAAAAATYILVSYKNVALAAQEESPNALCRACRAPKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTASDARLAEALDGLLASVTPSFVTTFLLPALVRISPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTFPTTILHTPPEIKAMHEAKHRQLYAPLLIRLQRKFPGFAHSLFSRLAAT--GMVQCREGKRVTVGEEEKAARTAESEAXXXXGGVTSPPSPTTSPFPYTYSMWLSYLRSKDWHSHFAYGRSEALFALRRAPGIRFNLRDKAQGSWTSAEREYMCSPACLPVQTQGLGLG-----PWVGVGEEEVXXXXXXXXEEEGWVRCKEWMPCPLGGPILR 513 M TPRVLPWQDWAEWTETS LFS D + R++GVGRVKAWRARGRLPVA+DATA++LEV LL+ + N RS ELR LY MV+ RAINGLVEG QTKFYAEPV+AVAARLGI QWLVDLRHEATHASLPSL+ LRMGAQHLLDWL+RGYWEKQ DLE AAAAA +L++Y++VALA QEE PNAL RACR +E I+TASD LAEAL LL SVTPSF+TTFLLPALV I P +T L E+K + KHR+LY PLL+RLQR+FP FA SLF RL + G ++ R G E + AR E+ +S P+P T+ MW+SYL+S+DWHSHF YGR+EA F LRRA GIRFNLRDKA SWT+AE ++M S A V +GLGLG XXXXXXXX W C+EW+P PLGGP++R Sbjct: 10 MNTTPRVLPWQDWAEWTETSNLLFSIDIERRVQGVGRVKAWRARGRLPVAVDATAAILEVGLLDVHPNSTNSVRSPTELRYLYSMVLVRAINGLVEGCQTKFYAEPVHAVAARLGIPQWLVDLRHEATHASLPSLSALRMGAQHLLDWLHRGYWEKQGQDLEQAAAAAHGLLLAYRSVALAVQEECPNALDRACRLQRE------------------DAGSKELGSERGGIRTASDTHLAEALQALLCSVTPSFLTTFLLPALVCI-PHGRVGQDDIVRPSSWGECFLLPDSELEDRASGVTAKCSST--EGCLPVSAELKTLQAIKHRRLYIPLLVRLQRRFPCFARSLFFRLVSPMGGGLKWRGAGGKGPGTESEGARATEAAHFS-----SSLPAP-------TFGMWVSYLQSRDWHSHFPYGRAEATFTLRRASGIRFNLRDKASASWTTAESDFMLSRASGGVLRRGLGLGVGSKXXXXXXXXXXXXXXXXXXXXXXXWTLCQEWIPSPLGGPVMR 498
BLAST of NO24G00460 vs. NCBI_GenBank
Match: ETI34673.1 (hypothetical protein F443_18856 [Phytophthora parasitica P1569]) HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32 Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 LPW DWAEW E LFS D ++ R V RV +WR+R +LPVAI+ATA L+E+ L ES SRS +EL LY VI R +NGLV+G Q YA V+ +A R+GI W+VDLRHE++H LPSL LR AQHLL WL YW Q Sbjct: 8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: ETK75020.1 (hypothetical protein L915_18318 [Phytophthora parasitica] >ETL28443.1 hypothetical protein L916_18225 [Phytophthora parasitica] >ETP04573.1 hypothetical protein F441_18699 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32 Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 LPW DWAEW E LFS D ++ R V RV +WR+R +LPVAI+ATA L+E+ L ES SRS +EL LY VI R +NGLV+G Q YA V+ +A R+GI W+VDLRHE++H LPSL LR AQHLL WL YW Q Sbjct: 8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: XP_008896705.1 (hypothetical protein PPTG_05009 [Phytophthora parasitica INRA-310] >ETN17115.1 hypothetical protein PPTG_05009 [Phytophthora parasitica INRA-310]) HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32 Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 LPW DWAEW E LFS D ++ R V RV +WR+R +LPVAI+ATA L+E+ L ES SRS +EL LY VI R +NGLV+G Q YA V+ +A R+GI W+VDLRHE++H LPSL LR AQHLL WL YW Q Sbjct: 8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: ETO63471.1 (hypothetical protein F444_18845 [Phytophthora parasitica P1976]) HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32 Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 LPW DWAEW E LFS D ++ R V RV +WR+R +LPVAI+ATA L+E+ L ES SRS +EL LY VI R +NGLV+G Q YA V+ +A R+GI W+VDLRHE++H LPSL LR AQHLL WL YW Q Sbjct: 8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: ETP32698.1 (hypothetical protein F442_18672 [Phytophthora parasitica P10297]) HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32 Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 LPW DWAEW E LFS D ++ R V RV +WR+R +LPVAI+ATA L+E+ L ES SRS +EL LY VI R +NGLV+G Q YA V+ +A R+GI W+VDLRHE++H LPSL LR AQHLL WL YW Q Sbjct: 8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: KUF66780.1 (Ribosomal biogenesis protein LAS1L [Phytophthora nicotianae] >KUF88585.1 Ribosomal biogenesis protein LAS1L [Phytophthora nicotianae] >KUF99518.1 Bzip transcription factor [Phytophthora nicotianae]) HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32 Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 LPW DWAEW E LFS D ++ R V RV +WR+R +LPVAI+ATA L+E+ L ES SRS +EL LY VI R +NGLV+G Q YA V+ +A R+GI W+VDLRHE++H LPSL LR AQHLL WL YW Q Sbjct: 8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: XP_002907190.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY63754.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 146.7 bits (369), Expect = 1.900e-31 Identity = 77/155 (49.68%), Postives = 96/155 (61.94%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 +PW DW+EW E LFS D + R V RV +WR+R +LPVA++ATA L+E+ L ES SRS +EL LY VI R +NGLV+G Q YA V+ +A R+GI W+VDLRHE++H LPSL LR AQHLL WL YW Q Sbjct: 8 VPWLDWSEWQEVHVGLFSTDLFVQQRAVSRVASWRSRVQLPVAVNATAQLVELLLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAHRIGIPLWVVDLRHESSHNQLPSLPVLRFAAQHLLAWLRANYWGAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: XP_024578460.1 (Nuclear protein involved in cell morphogenesis and cell surface growth [Plasmopara halstedii] >CEG42091.1 Nuclear protein involved in cell morphogenesis and cell surface growth [Plasmopara halstedii]) HSP 1 Score: 143.7 bits (361), Expect = 1.600e-30 Identity = 75/155 (48.39%), Postives = 94/155 (60.65%), Query Frame = 0 Query: 8 LPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGLN--------GSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQ 155 +PW DW EW + + LFS D + R V RV AWR+R +LPVAI+AT+ L+E+ L ES SRS EL LY +I R +NGLV+ Q YA V+ +A R+GI W+VDLRHE+TH LPSL LR A+HLL WL YW Q Sbjct: 8 VPWVDWVEWQDVHESLFSTDPFLQQRAVSRVAAWRSRTQLPVAINATSQLVELQLHESMAQHHHHAVGVSSRSHSELSLLYANIIVRCVNGLVDASQKGEYAHAVSTLAQRIGIPLWIVDLRHESTHNQLPSLPVLRFAARHLLAWLRANYWNAQ 162
BLAST of NO24G00460 vs. NCBI_GenBank
Match: CBJ48933.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 139.4 bits (350), Expect = 3.100e-29 Identity = 73/191 (38.22%), Postives = 107/191 (56.02%), Query Frame = 0 Query: 7 VLPWQDWAEWTETSKWLFSPDTDSRLRGVGRVKAWRARGRLPVAIDATASLLEVALLESGL---------NGSRSALELRNLYGMVITRAINGLVEGLQTKFYAEPVNAVAARLGISQWLVDLRHEATHASLPSLATLRMGAQHLLDWLYRGYWEKQAHDLESAAAAATYILVSYK----NVALAAQEESP 185 ++PW+DW EW LFSPD R +GV V W++R R+P A++ T+ L+EV L + G G RS ELR +Y V+ RA+NGL Q +A PV+++A +G+ W+VD+RHEA H LP + +LR+ A L+D+L+R +W QA L A ++ YK + AL + SP Sbjct: 1 MIPWRDWDEWYRVKALLFSPDPYLRTQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAKGGGLAFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVSLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLIGRYKATSDSEALMPRSSSP 191 The following BLAST results are available for this feature:
BLAST of NO24G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00460 ID=NO24G00460|Name=NO24G00460|organism=Nannochloropsis oceanica|type=gene|length=1710bpback to top protein sequence of NO24G00460.1 >NO24G00460.1-protein ID=NO24G00460.1-protein|Name=NO24G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=519bpback to top Synonyms
Publications
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