NO24G00410, NO24G00410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO24G00410 vs. NCBI_GenBank
Match: XP_005852689.1 (hypothetical protein NGA_0310502 [Nannochloropsis gaditana CCMP526] >EKU23142.1 hypothetical protein NGA_0310502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 324.3 bits (830), Expect = 3.100e-85 Identity = 175/240 (72.92%), Postives = 204/240 (85.00%), Query Frame = 0 Query: 1 MLASSDLPTLALEKADSFDYHFMSHLMQRLQTSSDETEIAALNQVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRLSPPTRLLRMLLRAKDEAERQGILLEKLVLANPPKRP--PVLNEETGEEEEQEPLWGVADTQPEELAQSLKDFLEEIKAFEEELEADVVERARNLQAEIDVVVKAC 239 +LA+SDLP LAL KAD+FDYHFMSHLMQRLQ S+D+ EIAALN+VGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHL+ANELD AFDVILN N QQAR + GN+AAANILQHLAT+L EERDK+L PPTRLLRMLLR+ DEAERQG+LLEKL+LA P RP + E GEE E+E WG + PE+L Q+L+DFLEE++AFEEE+EA+VV+RA+ L+ EI +VV+AC Sbjct: 74 LLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHE---GNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEVAEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQAC 310
BLAST of NO24G00410 vs. NCBI_GenBank
Match: EWM24291.1 (hypothetical protein Naga_100047g11 [Nannochloropsis gaditana]) HSP 1 Score: 313.2 bits (801), Expect = 7.200e-82 Identity = 170/240 (70.83%), Postives = 198/240 (82.50%), Query Frame = 0 Query: 1 MLASSDLPTLALEKADSFDYHFMSHLMQRLQTSSDETEIAALNQVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRLSPPTRLLRMLLRAKDEAERQGILLEKLVLANPPKRP--PVLNEETGEEEEQEPLWGVADTQPEELAQSLKDFLEEIKAFEEELEADVVERARNLQAEIDVVVKAC 239 +LA+SDLP LAL KAD+FDYHFMSHLMQRLQ S+D+ EIAALN+VGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHL+ANELD AFDVILN N QQAR + GN+AAANILQHLAT+L EERDK+L PPTRLLRMLLR+ DEAERQG+LLEKL+LA P RP +E WG + PE+L Q+L+DFLEE++AFEEE+EA+VV+RA+ L+ EI +VV+AC Sbjct: 76 LLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHE---GNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRXXXXXXXXXXXXXEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQAC 312
BLAST of NO24G00410 vs. NCBI_GenBank
Match: CBJ27164.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 100.5 bits (249), Expect = 7.400e-18 Identity = 75/237 (31.65%), Postives = 127/237 (53.59%), Query Frame = 0 Query: 4 SSDLPTLALEKADSFDYHFMSHLMQRLQTSSDET-EIAALNQVGEAVNFAMQQRLAKADFILRGILK-SGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRLSPPTRLLRMLLRAKDEAERQGILLEKLVLANPP---KRPPVLNEETGEEEEQEPLWGVADTQPEELAQSLKDFLEEIKAFEEELEADVVERARNLQAEIDVVV 236 S ++ E D D+ ++HL R++ ++ E AL V E +N AMQ+RLA AD LR +L + D+K ME ++R + +++MAF V+++MN+Q RA D +G D A +L HL T + +D+RL+P +LLR LLR + R+ IL ++L L N +RPP ++ QP L Q++ D + +++ + ++ + + + LQ E++ VV Sbjct: 106 SGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQ--RAKDAEGA-DHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLERPPDKDK----------------VQPHLLQQAITDMITQVEDIGQAIDVGMTDSLKGLQVEVNTVV 323
BLAST of NO24G00410 vs. NCBI_GenBank
Match: XP_005827106.1 (hypothetical protein GUITHDRAFT_113862 [Guillardia theta CCMP2712] >EKX40126.1 hypothetical protein GUITHDRAFT_113862 [Guillardia theta CCMP2712]) HSP 1 Score: 72.4 bits (176), Expect = 2.100e-9 Identity = 61/200 (30.50%), Postives = 102/200 (51.00%), Query Frame = 0 Query: 23 MSHLMQRLQTSSDETEIAALNQVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRLSPPTRLLRMLLRAKDEAERQGILLEKLVLANPPKRPPVLNEETGEEEEQEPLW--------GVADTQPEELAQSLKDFLEEIKAFEE 215 M L RLQ SD ++ N +G+ + +RL +L +L SG++ V++ ++ +++K+ E+D AF ++L+MNI A+A TD +L H+ T + EE +KR P LL LLR DE + LLE + P EEEQE ++ A +PEEL +++K ++E ++A ++ Sbjct: 73 MQFLAGRLQEESDSSKWQ--NLLGD-IQKLTNERLENGKKLLVDLLNSGEINVLDRRIVENVKSGEIDPAFLIVLDMNINDAQAKATD--EITTNRVLGHIYTRVQEELEKRAKPSLGLLHKLLRLIDEPGIRMNLLEHNLKPKP-------------EEEQEYVYVDGKLIKDSGALVKPEELVEAIKLYMERVRALDQ 254
BLAST of NO24G00410 vs. NCBI_GenBank
Match: CBJ31091.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.0 bits (175), Expect = 2.800e-9 Identity = 65/229 (28.38%), Postives = 111/229 (48.47%), Query Frame = 0 Query: 16 DSFDYHFMSHLMQRLQTSSDETEIAALNQVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRLSPPTRLLRMLLRAKDEAERQGILLE------KLVLANPPKRPPVLNEETGEEEEQEPLWGVADTQPEELAQSLKDFL-------EEIKAFEEELEADVVERARNLQAEI 232 D D F++ L Q+ Q + AAL ++G+++N MQ+R+A+A L+ IL G+ + ME ++ + E+D A ++L N+QQ A++ D G A +L+ L D+++ P RL+R LLRAKD R IL + K+VLA+ G E + P D P + +++K + E F ++L+ D++ A + E+ Sbjct: 69 DQVDIQFLTLLNQKAQEAEGTDAAAALTRLGDSINNTMQRRMAQASERLQKILTVGNPERMEETIKAMAERGEVDDALVLLLQANLQQ--AEEADAG--PAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLAD------------GSETSEAP-----DVAPPKFIETVKGIIRNFGNVGESELGFAQQLD-DMISEAEQVATEL 275
BLAST of NO24G00410 vs. NCBI_GenBank
Match: GAX23767.1 (hypothetical protein FisN_12Hh345 [Fistulifera solaris]) HSP 1 Score: 67.4 bits (163), Expect = 6.900e-8 Identity = 70/226 (30.97%), Postives = 107/226 (47.35%), Query Frame = 0 Query: 16 DSFDYHFMSHLMQRLQTSSDETEIAALNQVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRL-SPPTRLLRMLLRAKDEAERQGILLE----KLVLANPPKRPPVLNEETGEEEEQEPLWGVADTQPEELAQSLKDFLEEI--KAFEEELEADVVERARNLQAEIDVV 235 D FD F+ L +R S+ E + A L A+ Q+R+AKA +L+ +L G+ ME + K ++ E+D AF ++L N QAR G + A +++ L ++E+DK+L S RL+R LLR D A R+ IL + K VL P GE +QE V D P + + K L ++E D+ R + L +E +VV Sbjct: 234 DQFDAQFVKVLNER--ASNGENDAAELL---AALAVEQQKRMAKAAELLKSVLSLGEPARMEGALIKKVREGEVDEAFLLLLEANENQARI----AGANGPAELMKRLRLRAADEKDKQLSSKEIRLIRKLLRTDDAAAREQILEDAFTPKTVLLVPGTAENAQKAVDGEAPDQEK--PVPDVPPPDFINACKAVLLNFGNLGSDDENRGDLASRIKKLASEAEVV 448
BLAST of NO24G00410 vs. NCBI_GenBank
Match: OSX69489.1 (hypothetical protein BU14_1464s0002 [Porphyra umbilicalis]) HSP 1 Score: 66.6 bits (161), Expect = 1.200e-7 Identity = 63/229 (27.51%), Postives = 108/229 (47.16%), Query Frame = 0 Query: 9 TLALEKA-DSFDYHFMSHLMQRLQTSSDETEIAALNQVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRLSPPTRLLRMLLRAKDEAERQGILLEKLVLANPPKRPPVLNEETGEEEEQEPLWGVADTQPEELAQSLKDFLEEIKAFEEELEADVVERARNLQAEIDVVVK 237 T A+ +A + D F+ HL Q+ +S + E A + V AV M R++ A + ++ +GD + M ++ L+ E+D AF ++L N++QA+A G A +L L +E RD R+ P L+R LLR D ER+ +L L P++ L + + GV ++L +L+ +E+ ++A +VER L E + V + Sbjct: 180 TAAVRRAYNRVDMRFLQHLAQKNLDASTDAERAEIEAVQAAVTQEMTVRMSAASAAFKSVVTAGDEEAMYRQLALLLQKGEMDEAFLLLLAGNLEQAKA----AGVAPAVEVLNRLQKRTAELRDNRVPPEVALVRKLLRTPDAVERKAMLTAALT----PRKKIALADGSSSA-------GVV-VDGKKLVVALRRLVEDF----GNVDASIVERVDALGLEAEAVAR 388
BLAST of NO24G00410 vs. NCBI_GenBank
Match: GAX14954.1 (hypothetical protein FisN_12Lh345 [Fistulifera solaris]) HSP 1 Score: 66.2 bits (160), Expect = 1.500e-7 Identity = 69/226 (30.53%), Postives = 107/226 (47.35%), Query Frame = 0 Query: 16 DSFDYHFMSHLMQRLQTSSDETEIAALNQVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLKANELDMAFDVILNMNIQQARADDTDGGNDAAANILQHLATMLSEERDKRL-SPPTRLLRMLLRAKDEAERQGILLE----KLVLANPPKRPPVLNEETGEEEEQEPLWGVADTQPEELAQSLKDFLEEI--KAFEEELEADVVERARNLQAEIDVV 235 D FD F+ L +R S+ E + A L A+ Q+R+A+A +L+ +L G+ ME + K ++ E+D AF ++L N QAR G + A +++ L ++E+DK+L S RL+R LLR D A R+ IL + K VL P GE +QE V D P + + K L ++E D+ R + L +E +VV Sbjct: 234 DQFDAQFVKVLNER--ASNGENDAAELL---AALAVEQQKRMARAAELLKSVLSLGEPARMEGALIKKVREGEVDEAFLLLLEANENQARI----AGANGPAELMKRLRLRAADEKDKQLSSKEIRLIRKLLRTDDAAAREQILEDAFTPKTVLLVPGTAENAQKAVDGEAPDQEK--PVPDVPPPDFINACKAVLLNFGNLGSDDENRGDLASRIKKLASEAEVV 448 The following BLAST results are available for this feature:
BLAST of NO24G00410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00410 ID=NO24G00410|Name=NO24G00410|organism=Nannochloropsis oceanica|type=gene|length=1748bpback to top protein sequence of NO24G00410.1 >NO24G00410.1-protein ID=NO24G00410.1-protein|Name=NO24G00410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top protein sequence of NO24G00410.2 >NO24G00410.2-protein ID=NO24G00410.2-protein|Name=NO24G00410.2|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
|