NO24G00350, NO24G00350 (gene) Nannochloropsis oceanica

Overview
NameNO24G00350
Unique NameNO24G00350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3012
Alignment locationchr24:121754..124765 +

Link to JBrowse

Properties
Property NameValue
Description26s proteasome non-atpase regulatory subunit 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:121754..124765 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042176regulation of protein catabolic process
GO:0008150biological_process
Vocabulary: Cellular Component
TermDefinition
GO:0000502proteasome complex
Vocabulary: INTERPRO
TermDefinition
IPR01358626S_Psome_reg_C
IPR036390WH_DNA-bd_sf
IPR035267PSMD3
IPR000717PCI_dom
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
Homology
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: EWM24327.1 (26s proteasome non-atpase regulatory subunit 3 [Nannochloropsis gaditana])

HSP 1 Score: 515.0 bits (1325), Expect = 3.000e-142
Identity = 304/476 (63.87%), Postives = 343/476 (72.06%), Query Frame = 0 
Query:    2 AADKMETDVPA--DAPTKYTPTLDDLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCE-VPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            A D METD PA  + P     TLD LKKN+TLL+ AVQ+SQLRLINRVLRNNTPFRR L PS L+EA+ +YL  D PL+ALGL  L+ +P + +                         XXXXXXXXXXX                       + +R  R + A S+A+ALLP+LR  NRRTL+ LAAK  FYLAL QER  + LA LRPL VALHRTACL HD++GQAT+LNLLLR LLADNLIEQA NL+ART FPE ASNNQLCR+LYYVGR++ATQLDY+DAF+KLNQA RK                          ALGFRREVTKLL+IVQLLLG+IPERATFDQP LRRSL+PYLALTTAVR GDLLEFEKTV  HA +FKKDKT+TLILRLGHNVIKTGLRKISLSYSRISL EIA +LHLDGP SAEFVCAKAI DGVIDA++DHEAG LQSRDV D+YST+EPQQ
Sbjct:   42 AEDSMETDAPAATEEPKSSITTLDGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAFPAPLFLPETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEG------------------RAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQ 499
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: OQS02194.1 (26S proteasome non-ATPase regulatory subunit 3 [Thraustotheca clavata])

HSP 1 Score: 332.0 bits (850), Expect = 3.600e-87
Identity = 201/451 (44.57%), Postives = 260/451 (57.65%), Query Frame = 0 
Query:   24 DLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            +LKKN+ L+EK V SS    + RV R     RR L    L  A+Q  LA D   RA  L+ L+ +P E             A    +++  E++                                    L++     A  LA  +      +NRRTL+  AA+ + Y A   ER G  + A+RPLL+  HRTACLR D++GQAT+LNLLLR  L +NL +QA  LV++T FPE  SNNQ  RYLYYVG++ A QL+YSD++TKL Q+ RK                          A+GFRR V KL +IVQLL+GE+PER+ F+QP L+ +L PYL LT AVR G+L +F   +  HAE FK DKT+TLILRL HNVIKTGLRKI+ SYS+I   +I  +L LD P +AEFVCAKAIRDGVIDA+IDH+ G +QS++  DVY+T EPQQ
Sbjct:    7 ELKKNVGLIEKVVASSNKEKLTRVFRTTAHIRRELTSIELTRAIQEILAEDNEARATLLQFLALIPPE-------------AEQDFDMNAGEDDPTVNEVEKDANVHMERSELIEVEVYLSLLVIAL--LLKSQLGQDAQRLADQVRGRCAQFNRRTLDIFAARVMTYFAYAFERYGDGITAIRPLLLEAHRTACLRCDEIGQATLLNLLLRNYLHENLYDQAYKLVSKTTFPEAVSNNQFVRYLYYVGKVHAVQLEYSDSYTKLMQSIRKAPQN---------------------TAVGFRRTVYKLAIIVQLLMGEVPERSIFNQPELKTALAPYLQLTNAVRVGNLEDFTAVLAQHAEGFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICAKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETIDVYATTEPQQ 421
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: OQR91890.1 (26S proteasome non-ATPase regulatory subunit 3 [Achlya hypogyna])

HSP 1 Score: 330.5 bits (846), Expect = 1.000e-86
Identity = 202/451 (44.79%), Postives = 264/451 (58.54%), Query Frame = 0 
Query:   24 DLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            +LKKN+TL+EK V S+Q   + RV R     RR L P+ L  AL   LA D  +R+  L+ +        A V P +      +  E D A  +                                    L+A     A + A+ +      +NRRTL+  AA+ + Y A   ER G+   A+RPLL+A HRTACLR D++GQAT+LNLLLR  L +NL +QA  LV++T FPE  SNNQ  RYLYYVG+I A QL+Y+D++TKL Q+ RK                          A+GFRR V KL +IVQLL+GE+PER+ F+QP L+ +L PYL LT AVR G+L +F   +   A++FK DKT+TLILRL HNVIKTGLRKI+ SYS+I   +I  +L LD P +AEFVCAKAIRDGVIDA+IDH+ G +QS++  DVY+T EPQQ
Sbjct:    7 ELKKNVTLIEKVVASNQKEKLARVFRTTAVVRRGLTPAELTRALTEILAEDNEIRSTLLKYV--------ALVKPDAADDVDMNAGEDDPAVGDVEQDANIHMERSELIEVETYLSLLVIAL-------LLKAQLGAEAQACANLVRERCMQFNRRTLDLFAARVMTYFAYAFERYGEGYTAIRPLLLAAHRTACLRCDEIGQATLLNLLLRNYLHENLYDQAYKLVSKTTFPETVSNNQFVRYLYYVGKIHAVQLEYTDSYTKLMQSIRKAPQN---------------------TAIGFRRTVYKLAIIVQLLMGEVPERSIFNQPELKTALLPYLQLTNAVRVGNLEDFTAVLTQFADVFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICTKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETVDVYATTEPQQ 421
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: XP_009034199.1 (hypothetical protein AURANDRAFT_70080 [Aureococcus anophagefferens] >EGB10589.1 hypothetical protein AURANDRAFT_70080 [Aureococcus anophagefferens])

HSP 1 Score: 325.9 bits (834), Expect = 2.600e-85
Identity = 203/453 (44.81%), Postives = 264/453 (58.28%), Query Frame = 0 
Query:   25 LKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYN--RRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPA-IALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            ++KN+ L+EKAV++SQ RL+ R LRNN P R+      L  A++  L         G +A   +   V AA+A   LP      + +                                        + +R        +L++ L+P LR+    RR L+PL+AK  FY AL  E+ GK    +R  L A HRTA L+H +   A +LN LLRG+L  NL+E A  LV++T FPE ASNNQ CRYLYY GRIQA QLDYSDAFTKL Q++RK                       PA  ALGFR +VTKL L+VQLL+GEIP+R+ FD   +R  L PYL LT AVRRGDLL + K V  +   F +DKT +L+ RL  NV+KTGLR+I++SYSRISL ++  +LHLD   SAEFVCAKAI+DGVIDA+IDH+  C++S+DV D+YSTIEPQ+
Sbjct:   36 IEKNVVLIEKAVETSQTRLMMRALRNNGPIRKKADAEVLGRAVRKLLGH-------GGDATQAL---VAAALAADVLPEVEIYVLTL-------------------------------------CVSTLVRGRDFAAGAALSALLIPRLRAVQALRRALDPLSAKVYFYFALCHEKLGK-FDDVRAQLFAAHRTAVLQHHEFSAAVLLNGLLRGMLEANLVEAALKLVSKTTFPETASNNQFCRYLYYTGRIQAIQLDYSDAFTKLMQSSRK----------------------APANTALGFRLQVTKLTLLVQLLMGEIPDRSAFDGEGMRGELEPYLKLTQAVRRGDLLAYNKVVADYGAKFARDKTASLVRRLSQNVVKTGLRRINVSYSRISLEDVKTKLHLDSVRSAEFVCAKAIKDGVIDAVIDHDNACVKSKDVADIYSTIEPQK 418
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: CBJ48748.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 324.3 bits (830), Expect = 7.400e-85
Identity = 197/453 (43.49%), Postives = 251/453 (55.41%), Query Frame = 0 
Query:   22 LDDLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            ++D+ +N  L+ K VQ    RL  R +  NTP RR +    L EAL   L  D P +A     L+++P E   AVA P  P+T    MEVD                                                                       L    V+   L+     +H A  RP L+ LHRT CLRHD++GQAT LNLLLR LL+ NL++QA  L ++T+FPE  SNNQ CRYLYY+GRI A QLDY+DA+TKL Q++RK                          A+GF+R   KL++IVQLLLGE+PER+ F+Q     SL+PYLALT AVR+GDL+EF + V  H   F+ DKTYTLI RL HNVIKTGLRKI+ SYSR+SL ++ +++ L+   SAEFVC+KAIRDGVIDA+IDH+ G +QSRDV DVY+T EPQQ
Sbjct:   31 VEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCEALAKLLPDDCPDKAELTRLLAKLPSE---AVAEPETPTT--EAMEVDS--------------------------------------EAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLPEVEVYLSTLVLTTLLRHKANARPRLLGLHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPESCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVSQN---------------------TAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEHESTFRADKTYTLIQRLAHNVIKTGLRKINSSYSRVSLQDLCEKVKLETVQSAEFVCSKAIRDGVIDAVIDHKNGWIQSRDVVDVYATDEPQQ 419
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: GAY02761.1 (transcription factor IIIB, putative, partial [Pythium insidiosum])

HSP 1 Score: 323.2 bits (827), Expect = 1.700e-84
Identity = 196/456 (42.98%), Postives = 267/456 (58.55%), Query Frame = 0 
Query:   23 DDLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQVGAK 479
            ++LK+ I LLE  V+++    I RVLR+ +  R+ L  + L  A++  L      +   L AL ++  +V AAV      ++ S+T   DK                                      + ++    D AL+   A L   + +NRRTL+P  AK   Y A + E+  K L ++R  L+  HRTACLR+D++GQAT++NLLLR  L +NL EQA   V++T FPEG SNNQ  RYLYYVG+IQA QL+Y++++TKL Q+ RK                          A GFRR V KL +IVQLL+GE+PER+ F+Q  LR +L PYL LT AVR G+L +F + ++ H+ LF+ D TYTLILRL HNVIKTGLRKIS SYSRI+  +I  +L L+   +AEFVCAKAIRDGVIDA+IDH+AG LQS++  +VY+T +PQ    K
Sbjct:   43 EELKRTIQLLESIVKTNAKEKIARVLRSTSRLRKTLSVAQLISAVRQVLPDSNESKRALLVALERVALKVNAAVDTEMADASDSAT--ADKV-------------VVPVVLPLIDLIEVEMYLSLFVLAALIKYQLQDDALNTVQAALTRCQQFNRRTLDPFQAKIFVYFATVHEQFTKDLPSIRETLLIAHRTACLRYDEIGQATLVNLLLRNYLHENLYEQAYKFVSKTTFPEGVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPQN---------------------TATGFRRTVYKLAIIVQLLMGEVPERSVFNQDELRAALAPYLQLTNAVRIGNLEDFNEVLKQHSALFQADLTYTLILRLRHNVIKTGLRKISTSYSRITFQDICAKLALESAQNAEFVCAKAIRDGVIDAVIDHKAGWLQSKETVNVYTTSDPQNAFQK 462
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: XP_008870910.1 (hypothetical protein H310_07313 [Aphanomyces invadans] >ETW00775.1 hypothetical protein H310_07313 [Aphanomyces invadans])

HSP 1 Score: 321.6 bits (823), Expect = 4.800e-84
Identity = 192/454 (42.29%), Postives = 262/454 (57.71%), Query Frame = 0 
Query:   21 TLDDLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            T  +LKKN++++EKAV ++Q   + RV R  T  RR +    L  A++  LA D   R++ ++ +S         V P       S  ++++  E +                                     +A     + +L   +      +NRR+L+  A++A+ Y A   ER G + A +RP+L+A HRTACLR D++GQAT+LNLLLR  L +NL +QA  LV++T FPE  SNNQ  RYLYYVG+I A QLDY+D++TKL Q+ RK                          A+GFRR V KL +IVQLL+GE+PER+ F+Q   + +L PYL LT AVR G+L +F   +  HA+ FK DKTYTLILRL HNVIKTGLRKI+ SYS+I   +I  +L LD P +AEFV AKAI+DGVIDA+IDH+ G +QS++  DVY T EPQQ
Sbjct:    4 TWKELKKNLSVIEKAVNANQKEKLARVFRTTTSVRRGITSVELKRAIEEVLAEDNESRSVLIKYVS--------LVKPDE-----SEDVDMNAGETDPVVGDVEKDDDSNVHLDRSDLIEVEIYLSLLVISKLFKAQLGCESQALTDFVRARSEEFNRRSLDIFASRALTYYAYAHERFGSNYAGIRPVLLAAHRTACLRSDEIGQATLLNLLLRNYLHENLYDQAFKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLDYTDSYTKLMQSIRKAPQN---------------------TAVGFRRTVHKLAIIVQLLMGEVPERSIFNQDEFKIALEPYLKLTNAVRLGNLEDFSSVLAQHADTFKSDKTYTLILRLRHNVIKTGLRKINTSYSKIRFTDICAKLALDTPQNAEFVVAKAIKDGVIDAVIDHKNGWMQSKETVDVYVTNEPQQ 423
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: XP_008603832.1 (hypothetical protein SDRG_00145 [Saprolegnia diclina VS20] >EQC42409.1 hypothetical protein SDRG_00145 [Saprolegnia diclina VS20])

HSP 1 Score: 321.2 bits (822), Expect = 6.300e-84
Identity = 195/451 (43.24%), Postives = 258/451 (57.21%), Query Frame = 0 
Query:   24 DLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            +LKKN+ L+EK V S+    + RV R  +  RR L P+ L  A+   LA D  +R   L+ +          V P +      +  E D A ++                                    L++     A + A  +      +NRRTL+  AA+ + Y A   ER G+   A+RPLL+  HRTACLR D++GQAT+LNLLLR  L +NL EQA  LV++T FPE  SNNQ  RYLYYVG+I A QL+Y+D++ KL Q+ RK                          A+GFRR V KL +IVQLL+GE+PER+ F+Q  L+ +L PYL LT AVR G+L +F   +   A++FK DKT+TLILRL HNVIKTGLRKI+ SYS+I   +I  +L LD P +AEFVCAKAIRDGVIDA+IDH+ G +QS++  DVY+T EPQQ
Sbjct:    7 ELKKNVALIEKVVASNNKEKLARVFRTTSAIRRGLTPAELTRAVTEILAEDNEIRTSLLQFI--------GLVKPDAADDVDMNAGEDDPAVDDVEKDASVHMERSELIEVETYLSLLVIAL-------LLKSQLGAEAQACADLVRQRCMQFNRRTLDLFAARVMTYFAYAFERYGEGYTAIRPLLLTAHRTACLRCDEIGQATVLNLLLRNYLHENLYEQAYKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLEYTDSYNKLMQSIRKAPQN---------------------TAIGFRRTVYKLAIIVQLLMGEVPERSIFNQTELKTALLPYLQLTNAVRVGNLEDFTAVLNQFADVFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICTKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETVDVYATTEPQQ 421
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: XP_012199464.1 (hypothetical protein SPRG_04936 [Saprolegnia parasitica CBS 223.65] >KDO29869.1 hypothetical protein SPRG_04936 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 321.2 bits (822), Expect = 6.300e-84
Identity = 195/451 (43.24%), Postives = 257/451 (56.98%), Query Frame = 0 
Query:   24 DLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            +LKKN+ L+EK V S+    + RV R  +  RR L P+ L  A+   LA D  +R+  L+ +  +             P  A    +VD    E                                    L++     A + A  +      +NRRTL+  AA+ + Y A   ER G+   A+RPLL+  HRTACLR D++GQAT+LNLLLR  L +NL EQA  LV++T FPE  SNNQ  RYLYYVG+I A QL+Y+D++ KL Q+ RK                          A+GFRR V KL +IVQLL+GE+PER+ F+Q  L+ +L PYL LT AVR G+L +F   +   A++FK DKT+TLILRL HNVIKTGLRKI+ SYS+I   +I  +L LD P +AEFVCAKAIRDGVIDA+IDH+ G +QS++  DVY+T EPQQ
Sbjct:    7 ELKKNVALIEKVVASNNKEKLARVFRTTSGIRRGLTPAELTRAVTEILAEDNEIRSSLLKFIGLVK------------PDAAD---DVDMTAGEDDPAVGDVEKDASVHMERSELIEVETYLSLLVIALLLKSQLGAEAQACADLVRQRCMQFNRRTLDLFAARVMTYFAYAFERYGEGYTAIRPLLLTAHRTACLRCDEIGQATLLNLLLRNYLHENLYEQAYKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLEYTDSYNKLMQSIRKAPQN---------------------TAIGFRRTVYKLAIIVQLLMGEVPERSIFNQAELKTALTPYLQLTNAVRVGNLEDFTAVLNQFADVFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICAKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETVDVYATTEPQQ 421
[Close]
BLAST of NO24G00350 vs. NCBI_GenBank
Match: XP_009826168.1 (hypothetical protein H257_03673 [Aphanomyces astaci] >ETV84476.1 hypothetical protein H257_03673 [Aphanomyces astaci])

HSP 1 Score: 319.3 bits (817), Expect = 2.400e-83
Identity = 195/454 (42.95%), Postives = 259/454 (57.05%), Query Frame = 0 
Query:   21 TLDDLKKNITLLEKAVQSSQLRLINRVLRNNTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPSLPSTASSTMEVDKAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSGKHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLVARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKXXXXXXXXXXXXXXXXXXXXXXXPAIALGFRREVTKLLLIVQLLLGEIPERATFDQPSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGHNVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDALIDHEAGCLQSRDVYDVYSTIEPQQ 475
            T  +LKKN++++EKAV ++Q   + RV R  T  RR L    L  A+   LA D   R+L ++ +S         V P        +  E D    +                                     +A     + +L  A+      +NRR+L+  A++A+ Y A   ER G + A +RP+L+A HRTACLR D++GQ+T+LNLLLR  L +NL +QA  LV++T FPE  SNNQ  RYLYYVG+I A QLDY+D++TKL Q+ RK                          A+GFRR V KL +IVQLL+GE+PER+ F+Q   + +L PYL LT AVR G+L +F   +  HAE FK DKTYTLILRL HNVIKTGLRKI+ SYS+I   +I  +L LD P +AEFV AKAI+DGVIDA+IDH+ G +QS++  DVY T EPQQ
Sbjct:    4 TWKELKKNLSVIEKAVNANQKEKLARVFRTTTAVRRGLSAVELKRAIAEVLAEDNESRSLLIKYVS--------LVKPDESDDVDMNAGETDPVVND---------VEKDDHLDRSDLIEVEIYLSLLVISKLFKAQLGRESQALTDAVRVRSAQFNRRSLDIFASRALTYYAYAHERFGNNYAGIRPVLLAAHRTACLRSDEIGQSTLLNLLLRNYLHENLYDQAFKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLDYTDSYTKLMQSIRKAPQN---------------------TAVGFRRTVHKLAIIVQLLMGEVPERSIFNQDEFQVALEPYLKLTNAVRLGNLEDFTTVLTHHAETFKTDKTYTLILRLRHNVIKTGLRKINTSYSKIRFTDICAKLALDTPQNAEFVVAKAIKDGVIDAVIDHKNGWMQSKETVDVYVTNEPQQ 419
The following BLAST results are available for this feature:
BLAST of NO24G00350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24327.13.000e-14263.8726s proteasome non-atpase regulatory subunit 3 [Na... [more]
OQS02194.13.600e-8744.5726S proteasome non-ATPase regulatory subunit 3 [Th... [more]
OQR91890.11.000e-8644.7926S proteasome non-ATPase regulatory subunit 3 [Ac... [more]
XP_009034199.12.600e-8544.81hypothetical protein AURANDRAFT_70080 [Aureococcus... [more]
CBJ48748.17.400e-8543.49conserved unknown protein [Ectocarpus siliculosus][more]
GAY02761.11.700e-8442.98transcription factor IIIB, putative, partial [Pyth... [more]
XP_008870910.14.800e-8442.29hypothetical protein H310_07313 [Aphanomyces invad... [more]
XP_008603832.16.300e-8443.24hypothetical protein SDRG_00145 [Saprolegnia dicli... [more]
XP_012199464.16.300e-8443.24hypothetical protein SPRG_04936 [Saprolegnia paras... [more]
XP_009826168.12.400e-8342.95hypothetical protein H257_03673 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL039nonsL039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR026ngnoR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002872NSK002872Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00350.1NO24G00350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00350.2NO24G00350.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598013gene_7262Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00350.1NO24G00350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00350.2NO24G00350.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00350 ID=NO24G00350|Name=NO24G00350|organism=Nannochloropsis oceanica|type=gene|length=3012bp
CTTCGCTTGGCTGCCCTGTGTGCTTGTGCATTCGCAAGGAAAGGAAGAAA
AGGGTAAGGAGATGGATCGCATCGACCCCTGGTCCACCCATGACAAAGTC
TTCAGCTCTGGTGGTTCCATTCGACTCCCCCCGTCTGCCTGTAGGTAGGG
GAGGGAGAGGACGAGGACGTGCTTGAGGGCAAGTCTCATCAGAGGCGTCA
TCGCCAGAAAACCCTACCCTGCTTCGTTCCCTCGAAGAATTCCGTCGATG
CGGTGCTCCCACCGGTGCGTGCATGCGTGCGGGCCAGTCACACCACCTCT
ACAACAAGTTTGCCATCTCCTCGAGCAGCAGGGTGGCCGTGGCATTGCAT
ACGTTGCCGGCCGCGTCTCATCAATCTCCTCCTTTCTCCTGAAACAAACA
AATCACAACACCAGGCAACGAGAAGCATGGCCGCCGACAAGATGGAGACG
GACGTGCCCGCCGATGCGCCCACGAAGTACACGCCCACGCTAGATGgtac
gtccgtttggtgatgtgattgcttgtgtgactgtggagatcatggatgca
ttccttgtcgcgttggggagcagcaacacgaaaagggagcgtgtccgctc
ctctgtctaccctccttccccgcctcccccccctcccttctccaacccct
cccccacatcgtgatacgcgcatctttgtatagaattttctccgtttacg
cgctttctgtatcagggacggcaaccctgacagagcccacccacctcgcc
ctccctccttccctctttcccccgtttttccagACCTGAAAAAGAACATC
ACACTGCTGGAGAAAGCCGTACAATCCTCCCAACTCCGTCTCATCAACCG
GGTCCTCCGCAATAATACCCCTTTCCGTCGCGCACTCCCTCCCTCCACCC
TTGCCGAGGCCCTCCAACACTACCTCGCCCCTGATCTCCCTCTTCGAGCG
CTAGGGCTGGAGGCTCTCTCCCAGATGCCATGCGAGGTGCCTGCAGCCGT
CGCCCCTCCCTCCCTCCCTTCCACCGCCTCCTCCACCATGGAAGTCGACA
AGGCGGAGGAAGAGAAGCCCGCGGGAAGCAAGACAGTCTCGTTCCCTCCC
TCCCCTCCTCCGCCTCCCCTCTTCCTCCCTGAAACCACCACCTACCTCCT
CCTCCTCGTCCTCACCTCCTGCCTCCGCGCCTCCCGCCATGACCTCGCCC
TCTCCCTCGCTTCCGCCCTCCTCCCCTTTCTCCGCTCCTATAACCGGCGC
ACGCTCGAACCGCTGGCGGCCAAGGCCGTATTTTACTTAGCACTAATCCA
GGAGAGATCAGGGAAACACTTGGCAGCCCTCCGTCCCCTCCTCGTCGCCC
TGCACCGCACTGCCTGCTTACGTCACGATGACGTTGGACAGGCGACCATC
CTCAACTTGTTGTTGAGGGGTCTCCTGGCTGATAATTTGATTGAGCAAGC
GAGCAATCTGGTGGCCCGCACCCACTTTCCCGAGgtacgcacgtccttgc
cctccttccttccctccctccctccctccctccctccccgttcttcccat
ataggcgtcattcgtgctttttattcaagaagtgatctattcatcccctc
atatatgcatccatgcatgcctgccttcgtctcacaacaaaagGGCGCGA
GCAACAACCAGCTCTGTCGCTATCTCTACTATGTGGGCCGGATCCAAGCC
ACTCAGCTGGATTACTCCGACGCCTTTACAAAGCTCAACCAAGCCGCCCG
AAAAGCACCCTCGGACGACGCTACCACCATCACCACCACCAGCAGCAGCA
GCAGCAGCAGCGGCAGGAGGAGCCCCGCAATTGCCCTGGGGTTTAGGCGG
GAGGTGACCAAACTGCTCCTCATTGTGCAGCTCCTCCTGGGAGAGATCCC
AGAGCGGGCCACCTTCGACCAGCCCTCCCTCCGTCGTTCCCTCCGTCCCT
ACCTTGCCCTGACCACCGCCGTGCGGCGTGGGGACTTGCTGGAGTTTGAA
AAAACGGTTCAAATGCACGCCGAGCTCTTCAAGAAGgtacctttcttttt
tatttatttttccatggctgatcgtcctccctccttccctccctccttct
ctccctccctctctccctccctctcttcctcccttctatactacctagct
cagcccttgtccccctcccacccacccctccctctctcccgccctccttc
ctccctgcgacgggcgatgcaatgcctggactatctcaaatgctaagtat
ctgacgcagccctccctccctccctccctccctcactcgctttccagGAT
AAAACCTACACACTCATCCTCCGCCTGGGCCACAACGTGATCAAGACTGG
CCTTCGAAAAATCTCTCTCTCCTACTCCCGCATCTCCCTCGTAGAAATTG
CACAGAGGCTGCATCTAGgtccgtccccctcccctccctccgtccttcct
ttccctcggcggcatgttcgcacactcaccattctcctccctctcccccc
cccgtcctccccccgctgtccccccctccctcagACGGCCCCGTTTCGGC
GGAATTTGTCTGCGCCAAGGCCATTCGGGATGGTGTCATCGACGCCCTCA
TCGATCACGAGGCAGGCTGCCTCCAATCACGGGATGTGTATGACGTCTAC
TCGACCATCGAACCTCAGCAGGTAGGGGCGAAGCTACCCTCCCTCCTTCC
CTTTATTTCCTTCCTCGTTGCCCCTCTCGGCCGACTCGGTGGAGTGTCTC
ACGACCAACCCTCCCTCCGTCGTTCCCTCCCTCCCCCCTTCAGGCCTTTC
ACAAGCGCATCACCTTCTGCCTGGACGTGCACAACGAAGCCGTTAAATCC
CTCCGATACCCGGATGTACCGAGCTACGGAGGCAAGAAGAAAGGCAGCCT
GGAGGAGGAGGAGGAAGGGAAGGGGAAAGGGGAGGAGGAGAAGACGGAGG
AGGAGTTAGCCAAGGAGCTGGAGGAGGACATGGAGGAAGAGTTTTAAAGA
AGTGGAGGGAGG
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protein sequence of NO24G00350.1

>NO24G00350.1-protein ID=NO24G00350.1-protein|Name=NO24G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bp
MAADKMETDVPADAPTKYTPTLDDLKKNITLLEKAVQSSQLRLINRVLRN
NTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPS
LPSTASSTMEVDKAEEEKPAGSKTVSFPPSPPPPPLFLPETTTYLLLLVL
TSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSG
KHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLV
ARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKAPSDDA
TTITTTSSSSSSSGRRSPAIALGFRREVTKLLLIVQLLLGEIPERATFDQ
PSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGH
NVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDAL
IDHEAGCLQSRDVYDVYSTIEPQQAFHKRITFCLDVHNEAVKSLRYPDVP
SYGGKKKGSLEEEEEGKGKGEEEKTEEELAKELEEDMEEEF*
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protein sequence of NO24G00350.2

>NO24G00350.2-protein ID=NO24G00350.2-protein|Name=NO24G00350.2|organism=Nannochloropsis oceanica|type=polypeptide|length=570bp
MAADKMETDVPADAPTKYTPTLDDLKKNITLLEKAVQSSQLRLINRVLRN
NTPFRRALPPSTLAEALQHYLAPDLPLRALGLEALSQMPCEVPAAVAPPS
LPSTASSTMEVDKAEEEKPAGSKTVSFPPSPPPPPLFLPETTTYLLLLVL
TSCLRASRHDLALSLASALLPFLRSYNRRTLEPLAAKAVFYLALIQERSG
KHLAALRPLLVALHRTACLRHDDVGQATILNLLLRGLLADNLIEQASNLV
ARTHFPEGASNNQLCRYLYYVGRIQATQLDYSDAFTKLNQAARKAPSDDA
TTITTTSSSSSSSGRRSPAIALGFRREVTKLLLIVQLLLGEIPERATFDQ
PSLRRSLRPYLALTTAVRRGDLLEFEKTVQMHAELFKKDKTYTLILRLGH
NVIKTGLRKISLSYSRISLVEIAQRLHLDGPVSAEFVCAKAIRDGVIDAL
IDHEAGCLQSRDVYDVYSTIEPQQVGAKLPSLLPFISFLVAPLGRLGGVS
HDQPSLRRSLPPPFRPFTSASPSAWTCTTKPLNPSDTRMYRATEARRKAA
WRRRRKGRGKGRRRRRRRS*
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Synonyms
Publications