NO24G00170, NO24G00170 (gene) Nannochloropsis oceanica

Overview
NameNO24G00170
Unique NameNO24G00170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2251
Alignment locationchr24:52787..55037 +

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Properties
Property NameValue
DescriptionCytochrome P450
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:52787..55037 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037heme binding
Vocabulary: INTERPRO
TermDefinition
IPR036396Cyt_P450_sf
IPR001128Cyt_P450
Homology
BLAST of NO24G00170 vs. NCBI_GenBank
Match: WP_095045131.1 (cytochrome P450 [Candidatus Promineofilum breve] >CUS05762.1 Cytochrome P450 [Candidatus Promineofilum breve])

HSP 1 Score: 78.6 bits (192), Expect = 4.700e-11
Identity = 41/137 (29.93%), Postives = 73/137 (53.28%), Query Frame = 0
Query:  182 LGGPDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSF 319
            + G  RF +++ + YG I R  +    ++ ++DP+LARE LVT+  +F        +L+     G++ +NGE H R RRL+ PAFH ++ +D     +V   E + + +     G  ++  + MR LT+  + Q+ F
Sbjct:   20 IAGAPRFTSRLADEYGPIVRFSVFANHFYLIADPELAREALVTQAANFPKDERDVMILSRMIGHGLVTTNGEAHKRQRRLTQPAFH-TKRIDAYAGTMVDYTEAMVDEW---ADGRTLDAAEAMRELTMYIVAQTLF 152          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: WP_095580963.1 (cytochrome P450 [Streptomyces albireticuli] >PAU48648.1 cytochrome P450 [Streptomyces albireticuli])

HSP 1 Score: 72.8 bits (177), Expect = 2.600e-9
Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 0
Query:  187 RFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSFS 320
            RF  +++ R+G + + +I  R  H V+DP+L REV+  +   FE   +   + A  GD G+I S G+ H R+RRL  PAFH   +     V    +AE+ R    A EPGT  ++   +  LTL+ + ++ ++
Sbjct:   36 RFVRELR-RHGPLTKIYIGPRPVHFVTDPELVREVVAVQARAFEKGAMFTTLRAPLGD-GLITSAGDRHLRHRRLMQPAFHHERIARYARV----MAERSRASAAAWEPGTTRDLVPEIHRLTLDILLRTLYA 162          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: XP_020697824.1 (abscisic acid 8'-hydroxylase 1-like isoform X1 [Dendrobium catenatum])

HSP 1 Score: 71.2 bits (173), Expect = 7.600e-9
Identity = 50/145 (34.48%), Postives = 67/145 (46.21%), Query Frame = 0
Query:  174 GNMLRLIRLGGPDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSF 319
            G   +L     P+ F A+ + RYG + ++ ILG     +S P+ AR VLVT+ H F+ +F PA    + G   I F  GE H R RRL   AF    M D     V  + E       +LE G  IN Y  M++  L     S F
Sbjct:   88 GETFQLYSNKSPNSFFAEKQRRYGAVFKTHILGCHCVMMSSPEAARFVLVTKAHLFKPTF-PASKERMLGRQAIFFQRGEYHARLRRLVLRAF----MPDALRSKVSSIEEVALRALSSLEGGGFINTYKEMKTYALNVALLSIF 227          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: XP_020697825.1 (abscisic acid 8'-hydroxylase 1-like isoform X2 [Dendrobium catenatum] >PKU63858.1 Abscisic acid 8'-hydroxylase 1 [Dendrobium catenatum])

HSP 1 Score: 71.2 bits (173), Expect = 7.600e-9
Identity = 50/145 (34.48%), Postives = 67/145 (46.21%), Query Frame = 0
Query:  174 GNMLRLIRLGGPDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSF 319
            G   +L     P+ F A+ + RYG + ++ ILG     +S P+ AR VLVT+ H F+ +F PA    + G   I F  GE H R RRL   AF    M D     V  + E       +LE G  IN Y  M++  L     S F
Sbjct:   65 GETFQLYSNKSPNSFFAEKQRRYGAVFKTHILGCHCVMMSSPEAARFVLVTKAHLFKPTF-PASKERMLGRQAIFFQRGEYHARLRRLVLRAF----MPDALRSKVSSIEEVALRALSSLEGGGFINTYKEMKTYALNVALLSIF 204          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: WP_086830213.1 (cytochrome P450 [Allokutzneria sp. NRRL B-24872])

HSP 1 Score: 71.2 bits (173), Expect = 7.600e-9
Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 0
Query:  182 LGGPDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSFSISLG 324
            L GP RF A ++E +G+I R F+     + V+ P+LA +VLV     F+   V  +M  ++GD G+  SNGE + R RR+  PAF R+ +   T   +  LA +L + +    PG  + V   M+ L L    ++ FS  LG
Sbjct:   21 LRGPVRFLASLRE-HGEIVRIFLGPLPVYLVTTPELAWQVLVGDADKFDKGIVFDKMRPLFGD-GLATSNGEFNQRQRRMVLPAFGRARIEGYTESTITALATELADSW---HPGQVVEVDQRMQDLALGIAGRTLFSTELG 157          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: WP_014801589.1 (cytochrome P450 [Turneriella parva] >AFM11069.1 cytochrome P450 [Turneriella parva DSM 21527])

HSP 1 Score: 71.2 bits (173), Expect = 7.600e-9
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 0
Query:  185 PDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEP-GTEINVYDTMRSLTLEAITQSSF 319
            P  F A++   YG +AR  + GR    +S PDL +EVL+ +  +F  S       A+ GD G++ S G+ H R RRLS+PAF RS M      +V     ++  R++A  P G  ++    M  LTL  + ++ F
Sbjct:   23 PPEFFARLAADYGNVARFSVFGREALLLSHPDLIQEVLIEQPKNFRKSRGLQLAKALLGD-GLLTSEGDFHKRQRRLSSPAFARSRMAKYAEDMV-----RISERHVASYPAGVRVDANQLMMRLTLAIVNKTLF 151          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: WP_044934132.1 (cytochrome P450 [Acidobacterium ailaaui])

HSP 1 Score: 70.9 bits (172), Expect = 9.900e-9
Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = 0
Query:  178 RLIRLGGPDRFDAQMKERYG-----KIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSF 319
            R  ++G P R    + E YG     +I  S ++      + DP++ REVL+ +  +F       +M  + G+ G+I ++GE H R RR+ APAFHR + +     ++V  A  +R ++    PGTEI+V   M  L L+ + ++ F
Sbjct:   35 RFFKVGNPIRLFEYLAETYGPHSYYRIGPSHVV-----VLQDPEMVREVLIVQPQNFIKERTQRRMKILLGE-GLITADGEAHKRQRRIVAPAFHR-QRIQAYAGMMVDRAVVMREQW---RPGTEIDVAAEMMRLALQIVARTLF 170          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: PSP77734.1 (cytochrome P450 [Halobacteriales archaeon QS_1_68_20])

HSP 1 Score: 70.5 bits (171), Expect = 1.300e-8
Identity = 46/150 (30.67%), Postives = 77/150 (51.33%), Query Frame = 0
Query:  174 GNMLRLIRLGGPDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSFSISLG 324
            GN L+  R   P  F  +  E YG +      G+  + +S P+ ARE+L+T    +E   +  + +A     G++FS+G+   R RRL  PAFH  + + R   ++V  +E+L + +   EPG    V D M S+ L+ + +S F + +G
Sbjct:   16 GNTLQYAR--DPIGFRERCVEEYGDVVYVRNAGKEVYMLSRPEFAREILLTDHDKYEKPDLLQKRVASAFGNGLLFSDGDLWDRQRRLLQPAFH-PQQLQRYTEMMVEYSERLVDSW---EPGEAYVVQDQMESVALKILVRSLFGVDVG 159          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: WP_067491950.1 (cytochrome P450 [Actinomadura hibisca])

HSP 1 Score: 70.1 bits (170), Expect = 1.700e-8
Identity = 45/149 (30.20%), Postives = 73/149 (48.99%), Query Frame = 0
Query:  174 GNMLRLIRLGGPDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSFSISL 323
            GN L+++R   P R   Q  E++G +   ++LG+   TV  P+ A  VLV R   F +    +  +  +   GI+  + EEH  +RR+   AF R+ +     ++   + + L     A EPG +  VYD ++ LTL+  T     ISL
Sbjct:   28 GNTLQVMR--NPFRVARQRYEQFGPVTWGWLLGQRTVTVQGPEAAEAVLVNRDKAFANGPAWSYFIGPFFRRGIMLLDFEEHLHHRRIMQQAFTRARLSAYMDMMAPSIGKGLD----AWEPGRDFRVYDHLKQLTLDLATDVFMGISL 170          
BLAST of NO24G00170 vs. NCBI_GenBank
Match: NP_001333848.1 (uncharacterized protein LOC100274595 precursor [Zea mays] >AQK54543.1 abscisic acid 8'-hydroxylase2 [Zea mays])

HSP 1 Score: 68.9 bits (167), Expect = 3.800e-8
Identity = 52/145 (35.86%), Postives = 68/145 (46.90%), Query Frame = 0
Query:  174 GNMLRLIRLGGPDRFDAQMKERYGKIARSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFSNGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEINVYDTMRSLTLEAITQSSF 319
            G  L+L     P+ F A+ + RYG I R+ ILG     VS P+ AR VLVT+ H F+ +F PA    + G   I F  G+ H R RRL + AF  S    R  V  V   E +  R L    G  +N +  M+   L     S F
Sbjct:   55 GETLQLYSSKNPNVFFARKQNRYGPIFRTHILGCPCVMVSSPEAARFVLVTQAHLFKPTF-PASKERMLGPQAIFFQQGDYHARLRRLVSRAF--SPQAIRASVPAV---EAVALRSLRSWDGRLVNTFQEMKLYALNVALLSIF 193          
The following BLAST results are available for this feature:
BLAST of NO24G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_095045131.14.700e-1129.93cytochrome P450 [Candidatus Promineofilum breve] >... [more]
WP_095580963.12.600e-933.08cytochrome P450 [Streptomyces albireticuli] >PAU48... [more]
XP_020697824.17.600e-934.48abscisic acid 8'-hydroxylase 1-like isoform X1 [De... [more]
XP_020697825.17.600e-934.48abscisic acid 8'-hydroxylase 1-like isoform X2 [De... [more]
WP_086830213.17.600e-934.51cytochrome P450 [Allokutzneria sp. NRRL B-24872][more]
WP_014801589.17.600e-934.07cytochrome P450 [Turneriella parva] >AFM11069.1 cy... [more]
WP_044934132.19.900e-930.82cytochrome P450 [Acidobacterium ailaaui][more]
PSP77734.11.300e-830.67cytochrome P450 [Halobacteriales archaeon QS_1_68_... [more]
WP_067491950.11.700e-830.20cytochrome P450 [Actinomadura hibisca][more]
NP_001333848.13.800e-835.86uncharacterized protein LOC100274595 precursor [Ze... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR123ngnoR123Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00170.1NO24G00170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672597gene_7244Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101636g3gene10104Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00170.1NO24G00170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00170 ID=NO24G00170|Name=NO24G00170|organism=Nannochloropsis oceanica|type=gene|length=2251bp
ATGAACACCCTGTCTATGACAAGCCAGGGGAAGTTCGCgtacgtgcgaga
tgtccttgatttagcagcagccgtacacatgtcccctgttgtctcgccat
gtccaagtttatcatctccggaacgacgtacacacgcagcagcacagtgc
tgcagtttcatacgagacagctcgattggagcatctcacaatcgacggca
agcaaaacacacgacagagaaacgaatgtcgtcgcgtgtttggaatccgg
aagccatgccaaaaagaaggatgaaaaaaatggccatattcttcagtaca
tacgtgtatcagctcgaggctttcatatgcgctgccaagcaagcacagag
ggagaggaggccttgagtacgtatcttataaaccatgcaaatcaattaat
acttgcctcttatgcatgcataccatacacacagGGTCTGGACCAAGCTA
CCTTATCAAAGCCTCTCCTCCGATTGCCCGGCCCCCACGCAACAAAAGCA
ACAGCAGCAGCAGCAACATGCACCATCACTTCCGCCGGCGTTGCCCCCCC
CGCGCTCCTTGCTTCCTGTCATAGCCTCTTTTATTGTTGTCTCTGAACTT
GTCGGCAGCTTATTGAGCGGACAGGGTGTCCCAACCGGTCCTTTTAATGG
CGTGAGCGCCTTCTCCTTCTTGCCTCCTTCCACCAGGCCTCTCATCTCCA
CGTCCCGCATTCCTATTCAACTACCGCCTACAAGCGTACAAGTCCGACAC
TTCTCCTTCCCTACCGCCGTTTTTCCATTTTCCCTTCTTTCCCGTTACGC
AACCAGTACCACCACGATCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGTTCCTCTCCTCACTTGGCGCTGGCCCCTGGCCCTCGC
CCCCTTCCTTTGTTCGGCAATATGTTGCGCCTCATCCGCCTAGGTGGCCC
AGATCGTTTCGACGCCCAGATGAAAGAGAGATACGGGAAAATAGCAAGgt
aggccctcgccctccctccctccctccctccctccctcccccctcgtcca
gaaagccattgagtacctccctccctccctccctccctccttttctaccc
tcctccttttcaatcagGTCTTTCATTTTGGGCCGCGTCTGGCACACGGT
GTCGGATCCCGATCTCGCAAGAGAGGTGCTGGTGACGCGCACTCATGATT
TTGAAGACTCTTTCGTCCCTGCACAAgtatggaggcacgctctccctccc
tccctttctcttttcatttctctttccctctccctctccctgaaatcatc
taaatgataattttgatgtaaggaatttttcgtgagaacctttcggttat
ctcaactcttgaactcgtttctatccaagcctgccttccctctagcccta
actcttcccccctccctccctccttcctttctccccttctctcctcttcc
tttccctccacttgcaagATGCTGGCGGTGTGGGGCGACACCGGCATCAT
TTTTTCCAACGGAGAAGAGCATTTCCGTAACCGCCGCCTGTCCGCGCCTG
CCTTCCACAGGTCGGAGATGGTGGACCGGACGTGCGTCTTGGTCGTAGGA
CTAGCCGAGAAATTGCGAAACAGgtaaccccgccctccttcccctcgttc
ccttcttctttgattcctcccgtctgcctctgcgtggttgtatggctttc
attatctagggatttcaccgtgaatccacacgcgtttcttcgtgggtggc
actgataaacgtaatgcacatggtgtcttttcacagATACCTCGCCCTCG
AGCCCGGCACTGAGATTAATGTTTACGACACGATGCGATCCCTGACCCTG
GAGGCCATAACCCAAAGCTCCTTCAGCATCTCCCTCGGCCTCTTCGACGA
CGCGCCCGTCTCCCCGCCCTCCCTCCCGCCCTCCCCCCGCCCTCCTTCCC
GCCCTCCCCCATCGACGGCCGACGTCTCGACTCCCTCGTTCGCGCAATTT
TTTTGCACCTGGGGCCCGCCACTCGCAACCTGCTCCCCTATGCAGgtgag
ccctcccctccctcccttccctccctccctccctctctccctcttcctct
tttcccctctcttcacccactttaaaaacaacgtattttggtgtgtctag
agcatgccaaccaggccatccacaccacttacgaatgacccctccgttcc
tccctccttccctctctccctccctccttcccacagAGAAATTCGGCTTG
A
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protein sequence of NO24G00170.1

>NO24G00170.1-protein ID=NO24G00170.1-protein|Name=NO24G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=380bp
MNTLSMTSQGKFAVWTKLPYQSLSSDCPAPTQQKQQQQQQHAPSLPPALP
PPRSLLPVIASFIVVSELVGSLLSGQGVPTGPFNGVSAFSFLPPSTRPLI
STSRIPIQLPPTSVQVRHFSFPTAVFPFSLLSRYATSTTTIRSSSSSSSS
SSSSSSSSPHLALAPGPRPLPLFGNMLRLIRLGGPDRFDAQMKERYGKIA
RSFILGRVWHTVSDPDLAREVLVTRTHDFEDSFVPAQMLAVWGDTGIIFS
NGEEHFRNRRLSAPAFHRSEMVDRTCVLVVGLAEKLRNRYLALEPGTEIN
VYDTMRSLTLEAITQSSFSISLGLFDDAPVSPPSLPPSPRPPSRPPPSTA
DVSTPSFAQFFCTWGPPLATCSPMQRNSA*
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Synonyms
Publications