NO24G00160, NO24G00160 (gene) Nannochloropsis oceanica

Overview
NameNO24G00160
Unique NameNO24G00160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3903
Alignment locationchr24:48655..52557 +

Link to JBrowse

Properties
Property NameValue
DescriptionD-isomer specific 2-hydroxyacid dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:48655..52557 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR006140D-isomer_DH_NAD-bd
IPR006139D-isomer_2_OHA_DH_cat_dom
Homology
BLAST of NO24G00160 vs. NCBI_GenBank
Match: PNW71822.1 (hypothetical protein CHLRE_16g689700v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 322.4 bits (825), Expect = 2.500e-84
Identity = 165/330 (50.00%), Postives = 224/330 (67.88%), Query Frame = 0
Query:  175 IAVLGPHDAPHMEELNNLPAEAKVVVQGQALEDFEAVDSSLLASVDVLL---LAPPAG-RDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARD---GIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALRNLVDKKAGY 498
            + V GP D+P +  L  LPA  +VV  GQ  EDF  + +   ASVDVLL   +   AG RD + ALWPR  N+ W+H   AG++H+LFP L+   + LTNA+G++S SLAEY + A N+FAKD+PRL+ QQ    WE + V+EL+G T+G++GYGDIGQAC +LAKAF MRV+AL+RR +++A +   GI + +   DQ+ +L+A SDY+++AT  TP T  ++ A  +A  +   V IN+GRG  + E+ L+ AL +G I+GAALDVF+TEPLP DSP WGL NVL+SPH  D T  F  ES+ FF EN GRF+ G  L N+ DK+ GY
Sbjct:   57 LVVSGP-DSPELSVLQRLPAGVQVVATGQTPEDFAHLSAEQCASVDVLLNCGVGKNAGKRDDIRALWPRLTNLNWMHSASAGLEHLLFPELVEGPVTLTNAKGVYSHSLAEYCLTACNWFAKDLPRLRRQQAAGKWEPYDVEELRGKTLGVIGYGDIGQACARLAKAFRMRVVALRRRTELSAEEQAAGIVERMYSPDQLQELMAASDYVVMATPHTPATDKMVGAAAIAAMRPHSVFINLGRGKCVDEKALIAALQEGRIRGAALDVFETEPLPADSPLWGLDNVLMSPHCADRTKEFQFESLDFFIENMGRFLAGQPLANVCDKRNGY 385          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: KXZ49056.1 (hypothetical protein GPECTOR_23g141 [Gonium pectorale])

HSP 1 Score: 313.5 bits (802), Expect = 1.100e-81
Identity = 162/330 (49.09%), Postives = 220/330 (66.67%), Query Frame = 0
Query:  175 IAVLGPHDAPHMEELNNLPAEAKVVVQGQALEDFEAVDSSLLASVDVLL---LAPPAG-RDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARD---GIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALRNLVDKKAGY 498
            + V GP D+P +  L  LPA   VV  G+  EDF  +      SV+VLL   +   AG RD + ALWPR PN+ W+H   AG++H+LFP L+   + LTNA+G++S SLAEY + A N+FAKD+PRL+ QQ    WE + V+EL+G T+GI+GYGDIGQACG++AKAF MRV+AL+RR +++  +   G+ + +   DQ++ L+A SDY+++AT  TP T  ++ A  +A  +   V IN+GRG  + E  L++AL  G I+GAALDVFDTEPL  DSP W L NVLLSPH  D T  F  ES+ FF EN GRF+ G  L N+ DK++GY
Sbjct:   18 LIVSGP-DSPELSVLQRLPAGVTVVATGRTPEDFAHLSPQQWESVNVLLNCGVGKNAGKRDDIRALWPRLPNLVWMHSASAGLEHLLFPELVEGPVVLTNAKGVYSHSLAEYCLTACNWFAKDLPRLRRQQAAAQWEPYDVEELRGKTLGIIGYGDIGQACGRIAKAFRMRVVALRRRTELSEEEKAAGVVEKIFPPDQLHALMADSDYVVMATPHTPATHRMVDAAAIAAMRPHGVFINLGRGKCVDEAALIEALQAGRIRGAALDVFDTEPLTADSPLWQLDNVLLSPHCADRTKEFQFESLAFFVENMGRFLGGQPLANVCDKRSGY 346          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: CBN79054.1 (D-isomer specific 2-hydroxyacid dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 313.2 bits (801), Expect = 1.500e-81
Identity = 163/330 (49.39%), Postives = 224/330 (67.88%), Query Frame = 0
Query:  172 ECRIAVLGPHDAPHMEELNNLPAE--AKVVVQGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSS-IPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALR-NLVDKKAGY 498
            + ++ V+     P + EL  LP +  A V+ +G  + DF   ++    +   +LL     +DLLS L+P  P + WIH   AGVD  LFP LI S  + LTNA    SSSLAE+++L+  YFAKDV R K  Q+++ W++FCV E+ GAT+G+VGYGDIGQA    AKA GM++IA +RRP+++  DG+AD V+G  Q+ ++IA+SDY++VA ALTPET G++ A ELA A+   V+IN+GRGPL+ EE + Q L  G ++GA+LDVF  EPLP +S  WGL NVLLSPHN D+T  F+N+SVR F +N G FVKG  +  +LVDK+AGY
Sbjct:   14 QAKVIVVAREGDPTLVELERLPKDGSASVLFRGATMGDFSTPEAQQALAEANVLLNCGGKKDLLSQLFPLAPKLAWIHSRSAGVDSALFPELIESDRVSLTNA----SSSLAEHAVLSCLYFAKDVDRWKRNQRDRKWDQFCVSEVLGATLGVVGYGDIGQAAAVKAKAMGMKIIAQRRRPELSRGDGVADEVLGAGQVGEVIAKSDYILVAAALTPETTGMVGAAELARARPHAVIINIGRGPLVDEEAMTQMLRDGRLRGASLDVFCKEPLPAESDLWGLENVLLSPHNADLTAHFLNDSVRLFADNVGNFVKGDEVSIHLVDKRAGY 339          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: CBN77946.1 (D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding [Ectocarpus siliculosus])

HSP 1 Score: 307.4 bits (786), Expect = 8.200e-80
Identity = 161/329 (48.94%), Postives = 221/329 (67.17%), Query Frame = 0
Query:  172 ECRIAVLGPHDAPHMEELNNLPAEA-KVVVQGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHS-SIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALR-NLVDKKAGY 498
            +  I V+   D P + EL  LP +A +V+ +G  +E+F   +     +   +LL     +DLLS L+P  P + W+H    GVD  LFPALI +  + LTNARGLF+S+LAE+ +L+  YFAKDV R K  Q+ + WE++ V E+   T+GI+GYGDIG+A    AKA GM++IA +RRP+++  DGI D V G  Q+ D+IAQSDY++VA ALTP T G++ A+EL+ AK   V+I++GRGPLI E  + Q L  G ++GAALDVF TEPLP DSP WGL NVLLSPHN D+   ++++SVR F EN   FVKG  +  ++V+KKAGY
Sbjct:   14 QASIIVVAEADDPTLVELERLPKDASEVLFRGSTIEEFSTPEGKRALAEANVLLNCIGTKDLLSQLFPLAPKLAWVHSRLVGVDAALFPALIEADDVSLTNARGLFASALAEHVVLSCLYFAKDVDRWKRNQKCRKWERYHVAEVSRTTLGIIGYGDIGRAAAVKAKAMGMKIIAQRRRPELSIGDGIVDQVFGAGQVGDVIAQSDYILVAAALTPATVGMVGAEELSRAKPHAVIISIGRGPLIDEGAMTQMLQDGRLRGAALDVFTTEPLPTDSPLWGLENVLLSPHNADLAAHYLSDSVRKFAENVDNFVKGDDMSIHVVNKKAGY 342          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: XP_005649093.1 (hypothetical protein COCSUDRAFT_32746 [Coccomyxa subellipsoidea C-169] >EIE24549.1 hypothetical protein COCSUDRAFT_32746 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 293.9 bits (751), Expect = 9.400e-76
Identity = 149/327 (45.57%), Postives = 215/327 (65.75%), Query Frame = 0
Query:  172 ECRIAVLGPHDAPHMEELNNLPAEAKVVVQGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADV-VMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALRNLVDKKAGY 498
            + RI VL   DAP +E L  LP +AK+V  G+  ED  ++  S   SV+VLL      +  L  LWP  PN++W+H   AGV+H+LFP L+   + LTNA+G FS SLAEY++ A N+FAKD+PRL+AQQ+ + W+ F V+EL+G T+G+VGYGDIGQA  ++A+AF M +IAL+R   ++ ++    + V   D++N+L+A SDY+++A   TP T   ++A  + C +   V+IN+GRG  + E  L++AL +  IKGAALDV + EPLP DSP + L NVLLSPH  D T  F  E++  F     ++++G  L N+VDKK+GY
Sbjct:   10 KARILVLHSPDAPELEVLKKLPEDAKIVGVGRTYEDLSSLSESDWQSVNVLLNCGAPVKRNLQTLWPHLPNLEWLHSTAAGVEHILFPDLVEGPVTLTNAKGNFSHSLAEYTLTACNWFAKDLPRLRAQQKARQWKPFDVEELRGKTLGVVGYGDIGQAAARIARAFKMNIIALRRGDQLSEQERDEGLKVYKPDRLNELMADSDYVVMALPYTPSTHHFVNAAAIKCMRPNGVLINVGRGKTLEEAALIKALQEKRIKGAALDVTEVEPLPEDSPLYELDNVLLSPHCADRTAEFQFEALDQFLGILDKYIQGQPLYNIVDKKSGY 336          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: XP_002183675.1 (2-hydroxyacid dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1] >EEC44857.1 2-hydroxyacid dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 287.0 bits (733), Expect = 1.200e-73
Identity = 159/337 (47.18%), Postives = 217/337 (64.39%), Query Frame = 0
Query:  172 ECRIAVLGPHDAPHMEELNN--LPAEAKVVVQGQALEDFEAVDSSLLASVDVLLLAP--PAGRDLLSALWPRFPNVKWIHCIFAGVDHV---LFPALIHS-SIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADVVMGRDQ--INDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFT-ENCGRFVKGGALRNLVDKKAGY 498
            E +I  L   D    + L+N  LP  A ++  G  L DFE       A  +VL ++P  P    +L  +   FP+++WIHC  AG+D +    F  L  S SIP+TNA+G FSSSLAEY+++A +YFAKD+PRL   Q+ + WEK+ V+EL+G T+G+VGYGDIG+AC KLA  +GMR+IAL+R P ++  D   DVV GRD+  +N L+++SDY+I +   T ETRG+++A      K   V IN+GRGP++ E+ L++AL  G ++GAALDVF  EPLP  S  W L NVL+SPHNMD T+TFM+E+  FF  EN  RF+ G  L N VD   GY
Sbjct:   84 EAKILSLSDPDDAANQPLHNGSLPMGASLMGIGTTLADFEPYRD---AKPNVLFVSPSCPRAPAVLPLVLAAFPSIEWIHCRSAGIDFIESDEFTELATSMSIPVTNAKGQFSSSLAEYALMACSYFAKDLPRLMRNQKNRNWEKYDVEELRGKTLGVVGYGDIGRACAKLATVYGMRIIALRRHPFLSKDDPYCDVVYGRDKASLNRLMSESDYIICSAPSTVETRGMVNADAFNAVKKNAVFINLGRGPVVDEQALIEALQTGKLRGAALDVFTEEPLPSSSTMWDLPNVLISPHNMDQTSTFMHEATEFFLHENLPRFMVGEDLLNPVDPTLGY 417          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: GAX12321.1 (hypothetical protein FisN_1Hh253 [Fistulifera solaris])

HSP 1 Score: 286.2 bits (731), Expect = 2.000e-73
Identity = 153/321 (47.66%), Postives = 208/321 (64.80%), Query Frame = 0
Query:  180 PHDAPHMEELNNLPAEAKVVVQGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADVVMGRDQ--INDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFT-ENCGRFVKGGALRNLVDKKAGY 498
            P + P     N+LP  ++++  G +++DF+ V+       + + ++ P  RD L  L    P+++WIH   AG+D V  P L      +TNA+GL+SS+LAEY+++A +YFAKD+PRL   +  K WEK+ V EL+G+T+GIVGYGDIG+A  +LA A+GM+VIAL+RRP     D +  VV G D+  +N L A+ DY++ A  LT ET G+I  ++   AK+G V IN+GRGP++ E+ LV+AL  G +KGA LDVF TEPL   SP W L NVLLSPHNMD T TF  ES  FF  EN  RFV+G  L N VD  AGY
Sbjct:   43 PSNGPLNNPTNDLPQGSRLLAVGGSIDDFD-VELLKREGANTIFVSHPLARDPLDRLLQEIPSIEWIHSRSAGMDFVASPTLTSFQGKVTNAKGLYSSTLAEYTMMACSYFAKDLPRLLKNKGFKNWEKYNVLELRGSTLGIVGYGDIGRAAARLAVAYGMKVIALRRRP---VPDDLCSVVYGNDKESLNRLFAECDYILCAAPLTAETNGMIGKEQFDAAKSGAVFINVGRGPIVDEDALVEALKDGRLKGAGLDVFATEPLSKSSPLWELDNVLLSPHNMDQTATFTYESTSFFVEENLPRFVRGLPLLNPVDASAGY 359          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: XP_002178228.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49893.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 284.6 bits (727), Expect = 5.700e-73
Identity = 147/309 (47.57%), Postives = 204/309 (66.02%), Query Frame = 0
Query:  192 LPAEAKVVVQGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADVVMG--RDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFT-ENCGRFVKGGALRNLVDKKAGY 498
            LP   K++  G  ++DF+ V S      + + ++ P  R+ L+ L  + P ++W+H   AG+D V  P L      LTNA+G FSS+LAEY+++A ++FAKD+PRL   ++ K W+K+ V EL+GAT+GI GYGDIG+AC KLA  +GM++IAL+R P     D + + V G  +D +N L A+SDY++ +  LT ETRG+I  ++   AK G V IN+GRGP++ E  L  AL+ G +KGAALDVF  EPLP  SP W + NVLLSPHNMD T TFM+E+  F+  EN  RFV+G  L N+VD KAGY
Sbjct:  106 LPEGVKILAIGATMDDFD-VASLEREGANAIFVSHPQAREPLAQLLTQLPEIEWVHTRSAGIDFVTSPTLESWKGKLTNAKGQFSSTLAEYTLMACSFFAKDLPRLMRNKKVKCWDKYNVLELRGATLGIFGYGDIGRACAKLAAVYGMKIIALRRHP---KPDPLCNEVYGNDKDSLNRLFAESDYVLCSAPLTAETRGMIGKEQFDHAKEGAVFINLGRGPIVDEVALTDALSNGKLKGAALDVFTVEPLPNSSPLWEMDNVLLSPHNMDQTATFMHEATEFYVEENLPRFVRGQELLNIVDAKAGY 410          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: OHE79848.1 (hydroxyacid dehydrogenase [Verrucomicrobia bacterium GWF2_62_7])

HSP 1 Score: 284.3 bits (726), Expect = 7.500e-73
Identity = 145/323 (44.89%), Postives = 209/323 (64.71%), Query Frame = 0
Query:  175 IAVLGPHDAPHMEELNNLPAEAKVVVQGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALRNLVDKKAGY 498
            + +  P D   +  L  LP  A++VV   A   ++A   +       L++     R +L  LWPR   ++WIH + AG+D +LFPAL+ SSIPLT +RG+F+ SL E+++  M +FAKD+ RL  QQ E  WE+F V+EL G  +GIVGYG+IG+A  + AK FGM++ AL+R P+ +A DG+ D   G  +++ LI +SDYL+ A  LTP TRG+I  +EL   K   V++N+GRGP++ E  L+++L +  I+GA LDVFD EPLP    F+GL NVLLSPH+ D T T+++E++ FF EN  R+  G  L+ + DKKAGY
Sbjct:    7 LVIANPADR-SLAHLERLPESARIVVGLTAEAHWKAAPEA------DLVVCGGTSRPVLEELWPRLERLRWIHALAAGLDGLLFPALMESSIPLTCSRGVFARSLGEFAVAGMLFFAKDLRRLVRQQDEGRWEQFDVEELNGKVLGIVGYGEIGRAAAERAKPFGMKIHALRRNPERSAGDGLVDRQYGPGELDTLIGESDYLLAAAPLTPATRGLIGRRELGLMKETTVLLNLGRGPVVDEAALIESLKERRIRGAVLDVFDQEPLPAGHAFYGLDNVLLSPHSADHTATWLDEAMSFFIENFERWAAGEPLKAVADKKAGY 322          
BLAST of NO24G00160 vs. NCBI_GenBank
Match: WP_093518465.1 (D-2-hydroxyacid dehydrogenase [Stigmatella erecta] >SET52283.1 Phosphoglycerate dehydrogenase [Stigmatella erecta])

HSP 1 Score: 278.1 bits (710), Expect = 5.300e-71
Identity = 146/323 (45.20%), Postives = 205/323 (63.47%), Query Frame = 0
Query:  175 IAVLGPHDAPHMEELNNLPAEAKVVVQGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIFAGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQQQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPDVNARDGIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAKAGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGLSNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALRNLVDKKAGY 498
            + VL    A H+E L  L     + +     E  +A+  + +  +D         +DLL  L PR  N++WIH +FAGV+++LF  LI S +PLTN++G++S SL+E+++ AM +FAKD+ RL  QQ E  W+ F   EL+G T+GI+GYGDIGQA  + AKAFGMR++A +RRP+ +A D   D V   ++ +++IA SDYL++A    P T+ ++   EL   +   V+IN+GRG  + E  LV+AL QG ++GAALDVF+TEPLP   PFW L NVLLSPH  D T T+  ++V FF +N  RF  G  L NLVDK AGY
Sbjct:    6 LLVLADPTARHLEPLRQLAPRLHLTLGASEAELGDAIAQAQVLVID------SQKKDLLRTLLPRARNLRWIHSLFAGVENLLFEELIQSPLPLTNSKGVYSGSLSEFALAAMLFFAKDLRRLVRQQAEARWQPFTSVELRGQTLGILGYGDIGQAAAQRAKAFGMRILACRRRPEQSAGDAWVDAVFPLERRHEMIAASDYLLLAMPNAPGTQRMMGEAELKALRPHAVLINVGRGSTVDEAALVRALEQGRLRGAALDVFETEPLPAGHPFWRLENVLLSPHCADHTPTWREDAVAFFLKNLERFEAGAPLLNLVDKHAGY 322          
The following BLAST results are available for this feature:
BLAST of NO24G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PNW71822.12.500e-8450.00hypothetical protein CHLRE_16g689700v5 [Chlamydomo... [more]
KXZ49056.11.100e-8149.09hypothetical protein GPECTOR_23g141 [Gonium pector... [more]
CBN79054.11.500e-8149.39D-isomer specific 2-hydroxyacid dehydrogenase [Ect... [more]
CBN77946.18.200e-8048.94D-isomer specific 2-hydroxyacid dehydrogenase, NAD... [more]
XP_005649093.19.400e-7645.57hypothetical protein COCSUDRAFT_32746 [Coccomyxa s... [more]
XP_002183675.11.200e-7347.182-hydroxyacid dehydrogenase [Phaeodactylum tricorn... [more]
GAX12321.12.000e-7347.66hypothetical protein FisN_1Hh253 [Fistulifera sola... [more]
XP_002178228.15.700e-7347.57predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OHE79848.17.500e-7344.89hydroxyacid dehydrogenase [Verrucomicrobia bacteri... [more]
WP_093518465.15.300e-7145.20D-2-hydroxyacid dehydrogenase [Stigmatella erecta]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR123ngnoR123Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00160.1NO24G00160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00160.2NO24G00160.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597933gene_7243Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101636g1gene10106Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00160.1NO24G00160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00160.2NO24G00160.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00160 ID=NO24G00160|Name=NO24G00160|organism=Nannochloropsis oceanica|type=gene|length=3903bp
TGGCCTGTGAGATGTGTAGTGAGGACGGTGAGACCTCGCAGCCATTGCAC
ATCTACAACTTGGTAGCTTGCTTGCTTTATGCTCCTCAAGGAGGACCGAG
AGCATCGCATTCATCGTCAGCGACGCTGTTTGGTCCAGCATTAATGACAG
AAATACAAGAATGATGAATTATGCTACTTGGAGCTGTTGAGGAATCATGG
GGGCGGGCGTGCGGAGGAGGGAACGAGGAAGGGAAGGATGTAGACTCTCC
ATTGGATAGAGGGAGGAGGCCACGGGCGGATCTCACCCTCTCGGAACAAG
AGCAGCAGCTTCTTCAAGGAGCACGTTGCAAAGCGAAGACAAACCGACAG
CGACAGATGCCCAGgcaagtcggaaggggtgctcacgccctggcatattt
ctgcgcgacgcgatgtggtcggctgacaaggtcttggttgttggcatgtc
tcatcttcaagaaatgtctccaataacctcctcctcccccggattcttcc
tacctccctacctctctcaccttaatcctgtttcctcctattaacccttc
gcaactcgaaacagTTTGTGCTACATGCACCCACTTCCTCTGCGAAGGCC
CCTGCTATCCTTTCTCTCTTCCGCGTCCTTGTCCTCGTCCAAGGCCCTGC
GTGCAGCGATCAACAGCAACGGCAGCAGCAAGATCAACACAAGCAGCAGC
AGGAACGTCAGCCCGGGTTTCTCCTCTTCCTCCTCCTACCCTCACCAGCG
GACCTTCTTTTCCTTTTCATCCTCATCCTCGTCCTCGCCTGATTCTGATA
CTGACTCAGCCCCTCCCTCCATCCCTTCCAACCGCCTCCGTCGCACCCGG
CGTCCCCAGATTATCATGCGCAAGGAAATGGACGgtaattgtacatgagc
cctcatcctctccctccttccccacctccctccttccccacctccctcct
tccccacctccctccttccccacctccctccttcccccctccctccttta
caaactcgtacacgagtgcataagtccgattttccgcctccaatccttag
ttccttctacccttctctccatccttccctccctccttcagAATGCCGCA
TTGCCGTGCTCGGTCCCCACGATGCTCCTCACATGGAGGAGCTAAACAAT
CTGCCGGCCGAGGCCAAGGTGGTGGTGCAAGGCCAGGCATTAGAAGACTT
CGAGgtaagtctccccgctcgcccctgctccctcccttcctccctctctt
ccctccctctctttctttccttgtcccctccccaaattgaagtgaaggtg
gtggtatgccttccctgtttccctccctccctctccccctcccccctcct
caactccttcccttccctccttctcccctctcctttatccaacccctccc
tccctcccccctccttccccccccttactcagGCTGTAGACTCGTCCCTC
CTCGCCAGCGTCGACGTCCTCCTCCTCGCTCCGCCCGCCGGCCGTGACCT
TCTCTCTGCCCTCTGGCCTCGCTTTCCCAACGTGAAGTGGATCCATTGCA
TCTTCGCAGgtacctccctccctccctccctccctcaggaaacgttttct
tccccgccccccatcaactcttcccttcctcccttcctccctccctccct
cccctccccagGCGTCGATCACGTCCTCTTCCCCGCCCTCATCCACTCCT
CCATTCCTCTCACCAACGCCCGCGGTCTTTTCTCCTCCTCCCTTGCTGAA
TATAGCATCCTCgtacgtcccctccctccctccctccctcctccctcctt
tccttcctccctttctcctggtcaccgtcctcgtctcccgtaggtcgagt
ccctctctcactccctcccctcctccctccctccctcccaccctcccacc
ctccctccctccctccctccctcccaccctccctccctccggatgaagaa
gaggagcaagtcaaagacactccccacccacaccctttccctccctccct
ccctccctccctcagGCCATGAACTACTTTGCGAAGGACGTGCCTCGGCT
GAAGGCTCAGCAACAAGAGAAGATATGGGAGAAGTTTTGCGTCCAGGAAC
TCAAGGGAGCCACCGTCGGCATCGTCGGgtaaggaagagggaggaaggaa
gggagggagggagggaagaagggaggacatggagccggtggatgcctggg
ctgtgctcgatatcccgtggcctccctccctcccttcctccctccctccc
tccagctagggcgacgacgggcatacacttaccctccctctgcctccctc
cctctgcctccctccctctgcctccctccctccctccctccctccagCTA
CGGCGATATCGGGCAGGCCTGTGGGAAGCTTGCGAAGGCATTCGGCATGC
GCGTCATTGCCCTTAAGgtccgcccctccctctctccctccctccctccc
tccctccctccatccctttgcctccctccctctttgcctctctctatccc
tccctccatacccgcaactcttcctccctcccttcctcccgctcttcctt
ctcatgacaccttctcatgtgctcgtccgctccctccctccctccctccg
tccctctctagCGACGGCCGGACGTTAACGCGAGGGACGGCATCGCCGAC
GTAGTCATGGGACGAGACCAGgtagggagggagggagggagggagggagg
gagggggagggagggagggagggagggaggaagggagggagggaggaacg
atggtgggaagcaaagggagggaggaagagacgaaccttggagtgctgta
tcgtctcgtgggtatcaacaacgctttccctccctcccctccctcccatc
cctccctcttttcctcccaccctccctccctagATCAACGATCTGATCGC
CCAGTCCGACTACCTCATTGTCGCCACTGCATTGACGCCTGAGACACGCG
GCATCATCTCCGCGAAGgtgcccctccctccctccctccctccctccctc
ttactttctttcgacctttggttggagccctgccacgcttagatctctca
tccccactgctttccctccctccctccctccctccctcccctccctccct
cctcagGAGCTGGCCTGCGCCAAGGCCGGCTTGGTAGTGATCAATATGGG
CCGAGGTCCGTTGATAGTGGAGGAGGATTTAGTGCAGGCGCTGACTCAGG
GAACGATCAAGGGGGCGGCGCTCGATGTCTTCGACACGGgtaagagggga
gggagtgagggagggggtttctcaaggaggggcatttagtgttggcgtga
cggtggtggtggcagacggatgcattaatataagtcggtggcgtgggacc
tccctggtgacacgtatcatcccacaggccattccctccctccttccctc
cctccttccttcccccttctctccatcctcccctctcttggtcgaaccac
ccccgtgcatgcgccatgttcaccgcacgccgacctgagcagagtagcat
ctgatgccttcagagtagcatctgatgccttctcttttcacctgaacctc
aaccttctttcctcccttctctctacctctcctttttctattaatctagA
ACCTCTTCCTCCCGATTCTCCCTTTTGGGGCTTGTCGAACGTCCTCCTAT
CCCCTCACAATATGGACATGACCACGACCTTTATGAACGAGTCCGTGCGG
TTCTTCACAGAGAACTGCGGGCGATTCGTGAAGGGCGGAGCCCTGCGAAA
CCTCGTTGACAAGAAGGCAGGATACTGATGGGGATGGAGGAATAAAAGGA
GAGAGGAGAGGGGACGAAGGGAGGATAATTTTAAGGGAGTAGAAAAACAT
TAATGGAAGGAAAGAAAGATTCTGCCAGAAATTGATCAAGCAAAAGAAAT
AAA
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protein sequence of NO24G00160.1

>NO24G00160.1-protein ID=NO24G00160.1-protein|Name=NO24G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MLLGAVEESWGRACGGGNEEGKDVDSPLDRGRRPRADLTLSEQEQQLLQG
ARCKAKTNRQRQMPSLCYMHPLPLRRPLLSFLSSASLSSSKALRAAINSN
GSSKINTSSSRNVSPGFSSSSSYPHQRTFFSFSSSSSSSPDSDTDSAPPS
IPSNRLRRTRRPQIIMRKEMDECRIAVLGPHDAPHMEELNNLPAEAKVVV
QGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIF
AGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQ
QQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPD
VNARDGIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAK
AGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTEPLPPDSPFWGL
SNVLLSPHNMDMTTTFMNESVRFFTENCGRFVKGGALRNLVDKKAGY*
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protein sequence of NO24G00160.2

>NO24G00160.2-protein ID=NO24G00160.2-protein|Name=NO24G00160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=455bp
MLLGAVEESWGRACGGGNEEGKDVDSPLDRGRRPRADLTLSEQEQQLLQG
ARCKAKTNRQRQMPSLCYMHPLPLRRPLLSFLSSASLSSSKALRAAINSN
GSSKINTSSSRNVSPGFSSSSSYPHQRTFFSFSSSSSSSPDSDTDSAPPS
IPSNRLRRTRRPQIIMRKEMDECRIAVLGPHDAPHMEELNNLPAEAKVVV
QGQALEDFEAVDSSLLASVDVLLLAPPAGRDLLSALWPRFPNVKWIHCIF
AGVDHVLFPALIHSSIPLTNARGLFSSSLAEYSILAMNYFAKDVPRLKAQ
QQEKIWEKFCVQELKGATVGIVGYGDIGQACGKLAKAFGMRVIALKRRPD
VNARDGIADVVMGRDQINDLIAQSDYLIVATALTPETRGIISAKELACAK
AGLVVINMGRGPLIVEEDLVQALTQGTIKGAALDVFDTGKRGGSEGGGFS
RRGI*
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Synonyms
Publications