NO24G00120, NO24G00120 (gene) Nannochloropsis oceanica

Overview
NameNO24G00120
Unique NameNO24G00120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1842
Alignment locationchr24:39788..41629 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:39788..41629 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G00120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00120.1NO24G00120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00120.1NO24G00120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00120 ID=NO24G00120|Name=NO24G00120|organism=Nannochloropsis oceanica|type=gene|length=1842bp
ATGGTGGCCGTTGTGTCGGGTCGGATAAGAAGAAGAGCAGTTGTGGCACG
GGCACCGGTTCTCCTCCTTCCGCTCCTCCTTCCGCTCCTCCTGCTCCTCC
TCCTACAACAGCCACAGCAAGTCAACGCCGGCGCCTACAACCCACgtaag
tctcgaggatgacattgaaagatcacagaggaggagagggagggaaaaag
gggtgcggagagtgcgtgcgtgcatgggaaccatacggagcctcgatgac
taccaattatgcacacaaaccccgtgtgcctccctgctgtgcacattgcc
agctgatatccctctctccctcgctaccccctcttcctgtgtgcttgcta
tcctgggcgttgtgaggggccttgtgaggggccttgtgagtagctacatg
atttccaaatcttatccaagcatcctccctccctctacctccctttctcc
ctccctccctccctccctccctccctccttccagCCCTGGGCGAGGACGC
ACGGCTGGATCAGATTGAGGACTACCCGGATTGGTATGAGgtgcgtattg
acggtaggacggggaggaagggagggaggggcaagaaaaagaagtgaagc
tgaggatggaagcggctctttttcttcccatcaagtctcaattgtagccc
tccctcccccctccccccctcccccctttctccctctttctcctccctcg
tagGTCGATCCCCTCACCCTCGgtgcccgcgaatatatacttgacattcg
tgccgagaagggtgtgcatggcttgcctaagACCATGAAGGTCACTCTCG
AACCAAGCGGgtaggtgctggcttgtcctccctccctccctctctccctc
cctccctctctccctccctccttctctccctcgcagcctttactctcacc
gcctcatctttgtcttgcattcctttttcatatccgcaatttttcttcct
cgccccattcccaacgcctcaccttcgttccctccctccctccctccctc
cctctttacctcccacagATTCATCCGCATCGTCTCCTCCTCCCCCCGGC
CAGCCCTCTCTTCATGGGCTTGTGGGAGCCCTACACCAGCCTCTATAAAC
GCACTACTACTGGCTTCGGAATGTTGTTCCGgtatagaagcccaccctcc
ctccctccctccctccctccctccctccttttctttctgttctctttagt
gtccccagcaaccttgtcaattcccttaatttggcaatcatatcacccac
ctcttcctgaacctcgccctccatccctcccaccctccctctctctcccc
ctccctccctccctccctccccagCCGTTGGAAGTCCGAATGCGCCCAGG
ACATGGAGTATCTTTTTTTCAAAATGCAAATGCGCCCTCCCGCCTTCCAG
CCCGGCTGTATGAGCTTCAAGgtaagcaagccctccctccctccttccct
ccctccccctctccctcccttcccctccaatcactaacacatttgtcgtg
atcacatcatcgctgacacacctccctccttccgtccctccctccctccc
tccctccagACCGGAGAGATCTATGACGAGGCCGGTGCTCGCCTTGGCCG
CTTCAAGACGAAACTTCCTCACAATAAGGCACTCATCGACTCCAATTTCA
Ggtgcgcccctccctccctccctccctcccccctccttccctcctcccta
cctcgtttctgccgcgtttcaggcatgcaaggatgggttcttgtccaggc
gagagggagcatggactgatattccctgcttatgattcataatgatatgt
cgcagGGCGCACCGATCGTGGATCAAGCAGCGGCCCTGGTAG
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protein sequence of NO24G00120.1

>NO24G00120.1-protein ID=NO24G00120.1-protein|Name=NO24G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bp
MVAVVSGRIRRRAVVARAPVLLLPLLLPLLLLLLLQQPQQVNAGAYNPPL
GEDARLDQIEDYPDWYEVDPLTLDHEGHSRTKRIHPHRLLLPPASPLFMG
LWEPYTSLYKRTTTGFGMLFRRWKSECAQDMEYLFFKMQMRPPAFQPGCM
SFKTGEIYDEAGARLGRFKTKLPHNKALIDSNFRAHRSWIKQRPW*
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Synonyms
Publications