NO24G00050, NO24G00050 (gene) Nannochloropsis oceanica

Overview
NameNO24G00050
Unique NameNO24G00050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5101
Alignment locationchr24:12524..17624 +

Link to JBrowse

Properties
Property NameValue
DescriptionCondensin-2 complex subunit H2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:12524..17624 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030261chromosome condensation
GO:0030261chromosome condensation
Vocabulary: INTERPRO
TermDefinition
IPR031739Ncaph2
IPR009378H2_N
IPR031737CNDH2_C
Homology
BLAST of NO24G00050 vs. NCBI_GenBank
Match: CBJ29522.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-47
Identity = 220/755 (29.14%), Postives = 304/755 (40.26%), Query Frame = 0
Query:    2 SDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLDGGQTNLNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEKXXXXXXXXXXXXXXXXXXXXXXL---------------DAPH-CRPPLLVME-DHGNSFKVSTCTVHK-SGALLME-----ESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMTPGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLP------------VILS--LTGLSFPEFAPLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAMAEGRLA-EVAQMDMGEQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQ 717
            SD EE RF H+LQPIRDLA+NWD+DIA+SLEDYL++L+ + I+LDGG + +NFAEAALLIQG+ C+YSRKVE+++ LV + +D L+                G  D  DD +  G       LD ++ EG+ ID+                      XXXX                D P   RPP+ +ME D+GNSFK+STC   + SG LL+E     +SL  + + +  E    +RA   +     +G G   ++    +  G      XX                         P   ++                                       WA LDPHD G  +ARP +KG                                          V+LS  L GL++PEF                                                        A+ RLA + A+  MG +                                        XXXXXXX                          AP+SLE      DAF   P +YE LCR H+++FMRG E YAHETQL++RV  WQ+K+EPL++ QE+R  FDIH  G  +L  +       ++      +    PK A  +++S     +E       E  + +V F  +V+GKE+++VCRLFLASLQLANNGNV+L H ++  D     FR++LLT Q
Sbjct:  111 SDREE-RFKHILQPIRDLAQNWDVDIATSLEDYLEDLEHITITLDGGASKVNFAEAALLIQGSTCVYSRKVEHVYQLVQRTIDFLT-QXXXXXXXXXXXXXXGDGDVGDDSIMGGDETAFLPLDDIILEGKHIDIGSTSSRSRNRRRSSIAPSSGFHXXXXXXXXXXXXXXXXXXXGDVPDITRPPMFLMEQDYGNSFKMSTCAPQQLSGTLLIEGGALDDSLFAQGDAETSE---AARACDFWRGLGREGDGGLKARADGERWTGSGMDMGXXXXXXXXXXXXXXXXXXXXXXDDFDDPR--DDVPVDGPRTPEGSVSGRRELRQRESIEKEVLKADKAPIDPWAALDPHDPGTSQARPIRKGRTYKIPAQVRKRRGGKKIQGEAKGGGEEQKGDGGSWVGRDGRVMLSVPLLGLAYPEF--------------------------------------------QYVWNRERQRKAAQTRLARQQARGFMGREDFLPESAPPDSAGMNDVGTDYDGYGSDGSYCSDGGGGYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAPISLE------DAFRNKPQTYEDLCRNHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAAKGVHPKVADDAAAS----PEEAVQADTAEPDVPLVDFGTVVAGKERFDVCRLFLASLQLANNGNVRLFHGDNAADQETTPFRLELLTLQ 804          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: GAX94190.1 (Hypothetical protein PINS_002091 [Pythium insidiosum])

HSP 1 Score: 188.3 bits (477), Expect = 8.300e-44
Identity = 251/759 (33.07%), Postives = 323/759 (42.56%), Query Frame = 0
Query:    2 SDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLDGGQTN--------------LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEKXXXXXXXXXXXXXXXXXXXXXXLDAPHCRPPLLVME-DHGNSFKVSTCTVHKSGALLMEESLRRELEP-------DLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMTPGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEF---------APLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAMAEGRLAEVAQMDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFA---------EAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            S +E +RF HLLQPIRDL +NW+ID+A  LE+YL+EL+ L I+ D    +              +NFAEAALLIQGT+ IYSRKVEYL++LVFQ L  LS     G  + +G  E G   +  DL+    A+PL +++ V EE R I LK                                 PLL  E DHG++FK+ +C +H SG LL++E+ ++ LEP          ++ +  R A+  +       G+      V      XXXXXXX                 A    G   +   E +                                     WA LDP+DA K   +PF KG                                  + G+  P F          P                                                 + AA A+   A + Q      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           DM  GG DGG    Y    +E G   A   A         E P SYE +CR+H+++FMRG E Y  ET LTR+V DWQDK+ P+L  Q++  PFDIH  G  IL  LE E                         +                +    V F  +V G +Q+EVCR+FLASLQLANNGNV LVH     + + + F+M+LL+   ++E
Sbjct:    4 SSSESSRFQHLLQPIRDLGKNWNIDLAQELEEYLEELESLTIAFDANAISAAASSAMRGATPQLMNFAEAALLIQGTSMIYSRKVEYLYALVFQTLAHLSKQQDDGRGRQRGEXESGAGASHLDLL----ANPLPVVEHV-EEARHITLKKRDTLPQLSTSIALMG-----------------PLLPDERDHGDTFKLLSCNLHPSGVLLLDEASKKYLEPMDETLAISASQQSRTDRTATTLNFD-----GVRDDAADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGFEYGGGDAYENEEQ--------------------------TSDPLEALKDPWAPLDPYDASKSTVKPFVKGRSYSKKRAAQLEQQRLKQQIKKEEP--------EMXGVDDPAFKDRFLLRANRPQWSTWVWTELDERKLEAKLRKKYCKAPCLMKSCDSLWRMETKWKALLKRSIAAEAQSAQAILLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDM--GGFDGG----YDDAGVEFGDAAAAWRAPAGGAADDGERPLSYEEICRQHLEAFMRGTEQYIRETDLTRQVNDWQDKLTPILKEQDRHPPFDIHRYGQSILENLEMETXXXXXXXXXXXXXXXXXXXXXXXDA----------------DARPTVPFDALVGGLQQFEVCRMFLASLQLANNGNVHLVHAHEAAEQDAVPFQMQLLSTANVYE 679          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: OWZ23604.1 (Condensin-2 complex subunit H2 [Phytophthora megakarya])

HSP 1 Score: 187.2 bits (474), Expect = 1.800e-43
Identity = 214/746 (28.69%), Postives = 294/746 (39.41%), Query Frame = 0
Query:    6 EARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTNLNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEK----XXXXXXXXXXXXXXXXXXXXXXLDAPHCRPPLLVME--DHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXR---RLPWTGTTTTTISGGMARMTPGRPPSIGEEGR-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPE-----FAPLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAMAEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            E+R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D          G   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS       +  +   E G    +D+   +  ++PL L D  LEE +   + L+K    XXXXXXXXXXXX          + A       LV +  DHG +FK+ +C +H SG LL++E+ ++ L P               S+SL  G          ++ GG             L +                  +P    + G                                             WA LD +DA    ARPFKKG                            L     L GLS P      FA                                                  +     E R  + AQ M + EQ                                                E+  G+             R   A  +   G    D   + P +YE +CR+H+ SFM G E Y  ET L+++V+DWQ+K+ PLL  Q+   PFDIHH G EI+G LE     +E++N S D    S ++  +  +  G        + + +E  + V F+ +V GK QYEVCRLFLASLQLANNGNV L H  +  D   + F M+LL+   ++E
Sbjct:    3 ESRLQHLLQPIRDLSKNWNIDLASELEEYMDKLEHLSIAFDTEDGARIARDGDNVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKQQDDAQQTQQS--ETGEPREEDEGDSSVFSNPLPLYDE-LEEAKSTHITLKKVQXXXXXXXXXXXXXXAKALYRSKNNIQASIALMGSLVPDERDHGETFKLMSCNLHASGVLLLDEASKKYLRP-----------VQQTSNSLAFGE-------TPNRHGGMWVAADGDNPAMMLNFDDIDAXXXXXXXXXXLDEQPDYEFDAGEPMQDAPMDGKADNTQQEGLMTSEESSRRVTRSATASLPASEKDPWAPLDAYDASTSVARPFKKGRSYPRVPAYKKKKAGPAVLSNKDGAVG-LDDDTELDGLSDPAFQDRFFAGSNGSQWASWVWTETTSENPLEKTCKRTFCWAPLLCKNCDALWQREAKWRSMMRRCEAREKQSAQAMLLREQ--------------------------------------------AMEEEEVDGNDQMQALTLSTATARLDMAFRNDANGNADEDDSTDGPLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQEKLTPLLKQQDTHPPFDIHHYGREIIGRLE-----EEQKNSSLDKQRKSTRRDKNKRARVG--------QVSDDEEREAVPFETLVDGKSQYEVCRLFLASLQLANNGNVGLSHAHTTADHERVPFEMQLLSTANVYE 669          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: ETO82820.1 (hypothetical protein, variant, partial [Phytophthora parasitica P1976])

HSP 1 Score: 179.9 bits (455), Expect = 2.900e-41
Identity = 237/749 (31.64%), Postives = 320/749 (42.72%), Query Frame = 0
Query:    2 SDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTN-LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLS-GHMGGGNKKGKGSHEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEK------XXXXXXXXXXXXXXXXXXXXXXLDAPHCRPPLLVME--DHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMT-----PGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEFAP---LAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAM--AEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            S   E R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D         G +   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS       N++   + E+ GK +D+D   +   +PL L D  LEE +   + L++           XXXXXX           + A       LV +  DHG +FK+ +C +H +G LL++E+ ++ L+P       G   A + S +  +  G         ++GG                    ++            P      GE  +                                     WA +D +DA    ARPFKKG                            +   +   GLS P F     ++                                                 + M   E R  + AQ M + EQ        XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX                G      +SY  V    G          P +YE +CR+H+ SFM G E Y  ET L+++V+DWQDK+ PLL  Q+ R PFDIH  G EI+G LE+E          N SL          S +T K + +       EE  + V F+ +V GK Q+EVCRLFLASLQLAN+GNV L H  +  +   + F M+LL+   + E
Sbjct:   12 SGMSEGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEEPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKPDDKQQNQQNGDTGEEQGKKDDEDAEASVFNNPLPLYDE-LEEAKSTHITLKRAKEEGEDTENDXXXXXXEAKALNRSKNNIQASIALMGSLVPDERDHGETFKLLSCNLHSTGVLLLDEASKKYLKP-------GQYTAGDQSLAFGETPG---------RQGGMWVAADGENPATTLNFDDMDVNDDDEHENAFDNQPDYEYDSGEPVQDVPMDETVENTQQLEQTTDSRPATRSVTALSTVEKDPWAPVDAYDASTAVARPFKKGRSYPRVPAYKKKKTGPAALSNKDGAVG-MDDEVEQDGLSDPAFQDRFFMSSTGPQWASWVWTETASENPLEKTCKRTFCKAPLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQ-----AMEXXXXXXXXXXXXXXXXXXXXXXXAFRNDAXXXXXXXXXXXXXXXXXXXXXXXQGDFDDPMSSYEAVDTSGG----------PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLEEEQ--------KNSSL-------EKHSKTTKKAKNKRARLATEEEETETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLSTANVFE 712          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: ETP51914.1 (hypothetical protein, variant, partial [Phytophthora parasitica P10297])

HSP 1 Score: 178.7 bits (452), Expect = 6.600e-41
Identity = 229/749 (30.57%), Postives = 315/749 (42.06%), Query Frame = 0
Query:    2 SDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTN-LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLS-GHMGGGNKKGKGSHEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEKXXXXXXXXXXXXXXXXXXXXXXLDAP-HCRPPLLVM-------EDHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMT-----PGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEFAP---LAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAM--AEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            S   E R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D         G +   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS       N++   + E+ GK +D+D   +   +PL L D  LEE +   + L++                        +  + +  + +M        DHG +FK+ +C +H +G LL++E+ ++ L+P       G   A + S +  +  G         ++GG                    ++            P      GE  +                                     WA +D +DA    ARPFKKG                            +   +   GLS P F     ++                                                 + M   E R  + AQ M + EQ        XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX                G      +SY  V    G          P +YE +CR+H+ SFM G E Y  ET L+++V+DWQDK+ PLL  Q+ R PFDIH  G EI+G LE+E          N SL          S +T K + +       EE  + V F+ +V GK Q+EVCRLFLASLQLAN+GNV L H  +  +   + F M+LL+   + E
Sbjct:   12 SGMSEGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEEPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKPDDKQQNQQNGDTGEEQGKKDDEDAEASVFNNPLPLYDE-LEEAKSTHITLKRAKEEGEDTKNDRRRKRKEAKALNKSKNNIQASIALMGSLVPDERDHGETFKLLSCNLHSTGVLLLDEASKKYLKP-------GQYTAGDQSLAFGETPG---------RQGGMWVAADGENPATTLNFDDMDVNDDDEHENAFVDQPDYEYDSGEPVQDVPMDETVENTQQLEQTTDSRPATRSVTALSTVEKDPWAPVDAYDASTAVARPFKKGRSYPRVPAYKKKKTGPAALSNKDGAVG-MDDEVEQDGLSDPAFQDRFFMSSTGPQWASWVWTETASENPLEKTCKRTFCKAPLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQ-----AMEXXXXXXXXXXXXXXXXXXXXXXXAFRNDAXXXXXXXXXXXXXXXXXXXXXXXQGDFDDPMSSYEAVDTSGG----------PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLEEEQ--------KNSSL-------EKHSKTTKKAKNKRARLVTEEEETETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLSTANVFE 712          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: ETM00458.1 (hypothetical protein, variant, partial [Phytophthora parasitica])

HSP 1 Score: 177.9 bits (450), Expect = 1.100e-40
Identity = 228/749 (30.44%), Postives = 314/749 (41.92%), Query Frame = 0
Query:    2 SDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTN-LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLS-GHMGGGNKKGKGSHEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEKXXXXXXXXXXXXXXXXXXXXXXLDAP-HCRPPLLVM-------EDHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMT-----PGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEFAP---LAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAM--AEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            S   E R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D         G +   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS       N++   + E+ GK +D+D   +   +PL L D  LEE +   + L++                        +  + +  + +M        DHG +FK+ +C +H +G LL++E+ ++ L+P           A + S +  +  G         ++GG                    ++            P      GE  +                                     WA +D +DA    ARPFKKG                            +   +   GLS P F     ++                                                 + M   E R  + AQ M + EQ        XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX                G      +SY  V    G          P +YE +CR+H+ SFM G E Y  ET L+++V+DWQDK+ PLL  Q+ R PFDIH  G EI+G LE+E          N SL          S +T K + +       EE  + V F+ +V GK Q+EVCRLFLASLQLAN+GNV L H  +  +   + F M+LL+   + E
Sbjct:   12 SGMSEGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEEPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKPDDKQQNQQNGDTGEEQGKKDDEDAEASVFNNPLPLYDE-LEEAKSTHITLKRAKEEGEDTKNDRRRKRKEAKALNKSKNNIQASIALMGSLVPDERDHGETFKLLSCNLHSTGVLLLDEASKKYLKP-------AQYTAGDQSLAFGETPG---------RQGGMWVAADGENPATTLNFDDMDVNDDDEHENAFVDQPDYEYDSGEPVQDVPIDETVENTQQLEQTTDSRPATRSVTALSTVEKDPWAPVDAYDASTAVARPFKKGRSYPRVPAYKKKKTGPAALSNKDGAVG-MDDEVEQDGLSDPAFQDRFFMSSTGPQWASWVWTETASENPLEKTCKRTFCKAPLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQ-----AMEXXXXXXXXXXXXXXXXXXXXXXXAFRNDAXXXXXXXXXXXXXXXXXXXXXXXQGDFDDPMSSYEAVDTSGG----------PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLEEEQ--------KNSSL-------EKHSKTTKKAQNKRARLATEEEETETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLSTANVFE 712          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: ETI54100.1 (hypothetical protein F443_03047 [Phytophthora parasitica P1569])

HSP 1 Score: 165.6 bits (418), Expect = 5.700e-37
Identity = 234/745 (31.41%), Postives = 318/745 (42.68%), Query Frame = 0
Query:    6 EARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTN-LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGA-ADPLCLLDAVLEEGRDIDLKLEKXXXXXXXXXXXXXXXXXXXXXXLDAP-HCRPPLLVM-------EDHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMT-----PGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEFAP---LAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAM--AEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            E R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D         G +   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS                                +PL L D  LEE +   + L++       XXXXXXXXXXXXX    +  + +  + +M        DHG +FK+ +C +H +G LL++E+ ++ L+P       G   A ++S +  +  G         ++GG                    ++            P      GE  +                                     WA +D +DA    ARPFKKG                            +   +   GLS P F     ++                                                 + M   E R  + AQ M + EQ        XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX                G      +SY  V    G          P +YE +CR+H+ SFM G E Y  ET L+++V+DWQDK+ PLL  Q+ R PFDIH  G EI+G LE     +E++N S +    + KKA +  +     E+E           + V F+ +V GK Q+EVCRLFLASLQLAN+GNV L H  +  +   + F M+LL+   + E
Sbjct:    3 EGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEEPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKQDXXXXXXXXXXXXXXXXXXXXXXXXXSVFNNPLPLYDE-LEEAKSTHITLKRAKEEGEDXXXXXXXXXXXXXALNKSKNNIQASIALMGSLVPDERDHGETFKLLSCNLHSTGVLLLDEASKKYLKP-------GQYTAGDHSLAFGETPG---------RQGGMWVAADGENPATTLNFDDMDVNDDDEHENAFVDQPDYEYDSGEPVQDVPMDETVENTQQLEQTTDSRPATRSVTALSTVEKDPWAPVDAYDASTAVARPFKKGRSYPRVLAYKKKKTGPAALSNKDGAVG-MDDEVEQDGLSDPAFQDRFFMSSTGPQWASWVWTETASENPLEKTCKRTFCKAPLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQ-----AMEXXXXXXXXXXXXXXXXXXXXXXXAFRNDAXXXXXXXXXXXXXXXXXXXXXXXQGDFDDPMSSYEAVDTSGG----------PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLE-----EEQKNSSLEKHTKTTKKAQNKRARLATEEEE----------TETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLSTANVFE 699          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: ETP23918.1 (hypothetical protein F441_03025 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 164.1 bits (414), Expect = 1.700e-36
Identity = 234/745 (31.41%), Postives = 317/745 (42.55%), Query Frame = 0
Query:    6 EARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTN-LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGA-ADPLCLLDAVLEEGRDIDLKLEKXXXXXXXXXXXXXXXXXXXXXXLDAP-HCRPPLLVM-------EDHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMT-----PGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEFAP---LAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAM--AEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            E R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D         G +   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS                                +PL L D  LEE +   + L++       XXXXXXXXXXXXX    +  + +  + +M        DHG +FK+ +C +H +G LL++E+ ++ L+P       G   A + S +  +  G         ++GG                    ++            P      GE  +                                     WA +D +DA    ARPFKKG                            +   +   GLS P F     ++                                                 + M   E R  + AQ M + EQ        XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX                G      +SY  V    G          P +YE +CR+H+ SFM G E Y  ET L+++V+DWQDK+ PLL  Q+ R PFDIH  G EI+G LE     +E++N S +    + KKA +  +     E+E           + V F+ +V GK Q+EVCRLFLASLQLAN+GNV L H  +  +   + F M+LL+   + E
Sbjct:    3 EGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEEPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKQDXXXXXXXXXXXXXXXXXXXXXXXXXSVFNNPLPLYDE-LEEAKSTHITLKRAKEEGEDXXXXXXXXXXXXXALNKSKNNIQASIALMGSLVPDERDHGETFKLLSCNLHSTGVLLLDEASKKYLKP-------GQYTAGDQSLAFGETPG---------RQGGMWVAADGENPATTLNFDDMDVNDDDEHENAFVDQPDYECDSGEPVQDVPMDETVENTQQLEQTTDSRPATRSVTALSTVEKDPWAPVDAYDASTAVARPFKKGRSYPLVPAYKKKKTGPAALSNKDGAVG-MDDEVEQDGLSDPAFQDRFFMSSTGPQWASWVWTETASENPLEKTCKRTFCKAPLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQ-----AMEXXXXXXXXXXXXXXXXXXXXXXXAFRNDAXXXXXXXXXXXXXXXXXXXXXXXQGDFDDPMSSYEAVDTSGG----------PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLE-----EEQKNSSLEKHTRTTKKAQNKRARLATEEEE----------TETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLSTANVFE 699          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: XP_008916734.1 (hypothetical protein, variant, partial [Phytophthora parasitica INRA-310] >ETM97973.1 hypothetical protein, variant, partial [Phytophthora parasitica INRA-310])

HSP 1 Score: 163.7 bits (413), Expect = 2.200e-36
Identity = 235/749 (31.38%), Postives = 318/749 (42.46%), Query Frame = 0
Query:    2 SDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTN-LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGA-ADPLCLLDAVLEEGRDIDLKLEKXXXXXXXXXXXXXXXXXXXXXXLDAP-HCRPPLLVM-------EDHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMT-----PGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEFAP---LAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAM--AEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            S   E R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D         G +   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS                                +PL L D  LEE +   + L++       XXXXXXXXXXXXX    +  + +  + +M        DHG +FK+ +C +H +G LL++E+ ++ L+P       G   A + S +  +  G         ++GG                    ++            P      GE  +                                     WA +D +DA    ARPFKKG                            +   +   GLS P F     ++                                                 + M   E R  + AQ M + EQ        XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX                G      +SY  V    G          P +YE +CR+H+ SFM G E Y  ET L+++V+DWQDK+ PLL  Q+ R PFDIH  G EI+G LE     +E++N S +    + KKA +  +     E+E           + V F+ +V GK Q+EVCRLFLASLQLAN+GNV L H  +  +   + F M+LL+   + E
Sbjct:   12 SGMSEGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEEPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKPDDKXXXXXXXXXXXXXXXXXXXXXXXSVFNNPLPLYDE-LEEAKSTHITLKRAKEEGEDXXXXXXXXXXXXXALNKSKNNIQASIALMGSLVPDERDHGETFKLLSCNLHSTGVLLLDEASKKYLKP-------GQYTAGDQSLAFGETPG---------RQGGMWVAADGENPATTLNFDDMDVNDDDEHENAFVDQPDYEYDSGEPVQDVPMDETVENTQQLEQTTDSRPATRSVTALSTVEKDPWAPVDAYDASTAVARPFKKGRSYPRVPAYKKKKTGPAALSNKDGAVG-MDDEVEQDGLSDPAFQDRFFMSSTGPQWASWVWSETASENPLEKTCKRTFCKAPLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQ-----AMEXXXXXXXXXXXXXXXXXXXXXXXAFRNDAXXXXXXXXXXXXXXXXXXXXXXXQGDFDDPMSSYEAVDTSGG----------PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLE-----EEQKNSSLEKHTKTTKKAQNKRARLATEEEE----------TETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLSTANVFE 712          
BLAST of NO24G00050 vs. NCBI_GenBank
Match: KUF84031.1 (Condensin-2 complex subunit H2 [Phytophthora nicotianae])

HSP 1 Score: 163.3 bits (412), Expect = 2.800e-36
Identity = 225/745 (30.20%), Postives = 305/745 (40.94%), Query Frame = 0
Query:    6 EARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLD---------GGQTN-LNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGA-ADPLCLLDAVLEEGRDIDLKLEK------XXXXXXXXXXXXXXXXXXXXXXLDAPHCRPPLLVME--DHGNSFKVSTCTVHKSGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGRXXXXXXXRRLPWTGTTTTTISGGMARMT-----PGRPPSIGEEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWALLDPHDAGKGEARPFKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPVILSLTGLSFPEFAP---LAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAM--AEGRLAEVAQ-MDMGEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQRMHE 721
            E R  HLLQPIRDL++NW+ID+AS LE+Y+D+L+ L I+ D         G +   +NFAEAALLIQGT+ IYSRKVEYLH+LV+Q L  LS                                +PL L D  LEE +   + L++                            + A       LV +  DHG +FK+ +C +H +G LL++E+ ++ L+P       G   A + S +  +  G         ++GG       X            ++            P      GE  +                                     WA +D +DA    ARPFKKG                            +   +   GLS P F     ++            X                                    + M   E R  + AQ M + EQ        XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX                G      +SY  V    G          P +YE +CR+H+ SFM G E Y  ET L+++V+DWQDK+ PLL  Q+ R PFDIH  G EI+G LE     +E++N S +    + KKA +  +     E+E           + V F+ +V GK Q+EVCRLFLASLQLAN+GNV L H  +  +   + F M+LL+   + E
Sbjct:    3 EGRLQHLLQPIRDLSKNWNIDLASELEEYMDKLENLNIAFDPEDGASIANGEEPGVMNFAEAALLIQGTSVIYSRKVEYLHALVYQTLAHLSKXDDXXXXXXXXXXXXXXXXXXXXXXXXSVFNNPLPLYDE-LEEAKSTHITLKRXKEEGEDTENDRRRKRKETKALNRSKNNIQASIALMGSLVPDERDHGETFKLLSCNLHSTGVLLLDEASKKFLKP-------GQYTAGDQSLAFGETPG---------RQGGMWVAADGXNPXTTLNFDDMDVNDDDEHENAFVDQPDYECDSGEPVQDVPMDETVENTQQLEQTTDSRPATRSVTALSTVEKDPWAPVDAYDASTAVARPFKKGRSYPRVPAYKKKKTGPAALSNKDGAVG-MDDEVEQDGLSDPAFQDRFFMSSTGPQWASWVWTXTASENPLEKTCKRTFCKAPLLVKTCDALWQREAKWRSIMRRCEAREKQSAQAMLLREQ-----AMEXXXXXXXXXXXXXXXXXXXXXXXAFRNDAXXXXXXXXXXXXXXXXXXXXXXXQGDFDDPMSSYEAVDTSGG----------PLTYEEICRQHLASFMSGTEKYVRETDLSKKVSDWQDKLSPLLKQQDTRPPFDIHQYGREIIGRLE-----EEQKNSSLEKHTRTTKKAQNKRARLATEEEE----------TETVPFETLVDGKSQFEVCRLFLASLQLANSGNVALSHARTAAEHGQVPFEMQLLSTANVFE 699          
The following BLAST results are available for this feature:
BLAST of NO24G00050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ29522.11.200e-4729.14conserved unknown protein [Ectocarpus siliculosus][more]
GAX94190.18.300e-4433.07Hypothetical protein PINS_002091 [Pythium insidios... [more]
OWZ23604.11.800e-4328.69Condensin-2 complex subunit H2 [Phytophthora megak... [more]
ETO82820.12.900e-4131.64hypothetical protein, variant, partial [Phytophtho... [more]
ETP51914.16.600e-4130.57hypothetical protein, variant, partial [Phytophtho... [more]
ETM00458.11.100e-4030.44hypothetical protein, variant, partial [Phytophtho... [more]
ETI54100.15.700e-3731.41hypothetical protein F443_03047 [Phytophthora para... [more]
ETP23918.11.700e-3631.41hypothetical protein F441_03025 [Phytophthora para... [more]
XP_008916734.12.200e-3631.38hypothetical protein, variant, partial [Phytophtho... [more]
KUF84031.12.800e-3630.20Condensin-2 complex subunit H2 [Phytophthora nicot... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR013ncniR013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00050.1NO24G00050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675619gene_12216Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00050.1NO24G00050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00050 ID=NO24G00050|Name=NO24G00050|organism=Nannochloropsis oceanica|type=gene|length=5101bp
ATGAGTGACAACGAGGAAGCACGCTTCTCCCACCTGCTCCAGCCCATTCG
gtgagaacaaaggaaactagggagtggggaagggagggagagaacggggc
atgaagaggagacaccctgctgggcttaagtggctaagatatacacgcgc
gctacgccgcctttctcccccttcttaacatctctctatcgtctaccctg
ccttctattggttgcatgcgcactctcacctctttcttccccctccaacc
gcctccccatcccttctgcatcacacagAGATCTCGCCCGTAACTGGGAC
ATTGACATCGCATCCTCCCTGGAGGACTACCTCGATGAGCTCGACGGGCT
CAAGATCTCCCTGGATGGCGGTCAGACCAACCTCAACTTTGCCGAGGCGG
CCTTGCTGATTCAGgtgcatgaggcggagggagggagggagggaagaagg
gaaggagggattgaaggtatgaaaatgtgggtctgcgcgcaaaacaaacg
acccggggtcaagaggaaagtcaacgttttaagaggagtcgcttcttcag
gaaaggctgctctctttccccgcccaatcccttatcccctcccttcctcc
cctcccttcctccctccctcgaccatagGGCACTGCCTGCATCTACTCGC
GGAAGGTGGAGTACCTTCATTCCCTCGTCTTCCAGgtaagcccctcccgc
cctcccctttctcttctcttctccttctctcggtcctcccgttacccatc
ccattctcattccctcccacttctccccacctccctccctccctccctcc
ctccctccctccctccctccctcagGTTCTGGATCGCCTCTCGGGGCACA
TGGGCGGGGGCAACAAGAAGGGAAAGGGTTCTCACGAGGACGGTGGGAAA
Ggtattattactatgggctttccctcctctcctccctccatctttttctc
gcctccctccctccctcccggcgggaaacaaacacccgtccgccaagagt
cctggctgggatggccgtctaacctccctaccccctccctccctagATAA
CGATGATGATCTCGTGCCCGCGGGGGCAGCTGACCCTCTCTGTCTGCTCG
ACGCAGTGCTCGAGGAGGGGAGAGACATCGACTTGAAgtaaggagggagg
gagggagaaagggaggaagggggagtaagctcttgaatcaccagtattcc
cacacatcctccccgtcgctgaccatcggtatcctccttccctccctccc
tccctccctccctccctccctcgccccagGCTGGAAAAGGAGCAGCTGAA
GCGCCGGCAGCAGCAGCAGCAGCAGCAGTCCTCCTTCTCCTCCTCCTCCT
CCTCCCTCGATGCGCCTCACTGCCGCCCTCCCCTCCTGGTCATGGAGGAC
CACGGCAACTCATTCAAGGTCTCCACCTGCACCGTACACAAGgtacgcat
gtccctcccttcctcccgccctccctccctccctccctcccgtcctgctt
tcatttcttctccttcgcagcttccctttccccccctccatcccacctcc
ccctccctcgcctcctctcctcctccctcccccctctccccctccgtccg
tccagaaaatgacataaccactactcttctcccccccttccctcccccct
ctctccctcccttccccagTCGGGCGCACTGCTGATGGAAGAGTCCTTGC
GACGGGAGCTGGAGCCGGACTTGAAGGAGAAGAGGAAGGGCAGCCGGGCC
GCGTCAAACTACTCCCACTCCTTGACACAGgtagcacagagggagggagg
gagggagggagggagggagggggggacgaagggaaggcgggacggacagt
aactagacggccatcgtttgacagtggagctaaaccgccaccctcccgct
tccgccctccctctctcccttccctccctcctccccttcgggtccagGGC
CACGGCCTCCATGCCTCTCAACCTCCTGTCCACCAGGAAGGGGGGAGAGA
GGGAGGGAGGGAGGGGCTGAGGCGCCTCCCGTGGACAGGGACGACGACCA
CGACGATTTCGGGGGGAATGgttagtcctccctctctccctccctccctc
cctcctccctccctccctacctccctacctccctccctccctaccttgtc
gcctgttgactcatctcatcccaaacactccccgatcccaactcactcac
tatttcccttccctccctccctccccttctccttcagGCGCGGATGACGC
CTGGGCGGgtggggatggctcagcatggggctcgggggagcacgaggagt
ttgcagctccgccctccctccagCCGCCCTCCATCGGAGAGGAAGGGAGG
GAGGGAATGGCAGGAGGGGGGAGGTCCTTGCGGAGCGCGGCGGTTGTGGA
AGGGAAGGAGGGAAGGGGGGAAGAGGAGGACGACGAGGAGGACGAGGAAG
AGGATGATCCCTGGGCGCTCTTAGACCCGCACGACGCCGGGAAGGGGGAG
GCGAGGCCTTTTAAGAAAGgtagggaaggagggagggagggagggaggga
gggaaaggcgtctggtttgttgttcaatacatgatccatctcctctatta
ctggtcgctcaccgcccacccccctctcccttccttccctctcgttctcc
atcccttcctcacagGCAAACCAGCCAAGCCCCCTGCCCTCCCCAAGCAG
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGTCAAGAGCCTCTA
CCTGCCCGTCATCCTCTCCCTCACCGGCCTCTCCTTCCCTGAATTCGCCC
CCCTCGCCAAGACCCTTGAAGCCACGCTGAAGGGACAGgtacgctaccct
tcccttcctccctccctccctccctccctccctctttcttccgtttccct
ttacactcctcccctccacccgccctcctcttctccttccctttccctac
ctcccttcacctgcagGCTCGCCGCGCAGCCCGTTCAGCTGCTTCTGGTG
CTGCTTCTTCCTCCTCCCGCGACAAGGCCACGGACAAAAGTCGCCGTCGC
TCGATGGCTCTTTATGCCGCCCTCACCGCCCCTGCTGCCATGGCGgtgcg
tccctccctcccttcctccctcctccctccctccctccctccctccctcc
ctccctcctgatcactgcggcgtgtgcatgataatagaacagcaactctt
ctcattcccttcctcttccctgcctcccttccccctccctccctctccct
ctacagGAAGGACGCCTGGCCGAGGTGGCTCAGATGGATATGGGAGAGCA
GGGAGGAGAGGAGGGCGGGAGGGAGGACGAGGAGGAGGAGGACGACGACG
ACGTGTGTGGAGGGGCGGAAGCGGCCTGGCTGGATGGAGGGGGGGATGAC
GGCGGGTGGGAGGAAGCGAATGAGGACGAGGACGACTACCGgtacgtacc
accctctgtcggtgccctccctccctccctccctccctcccgcgagtttt
gtgtcggctcctgcaagtcttttctaaccacgttcccccctccctccccc
cccctccgtcagAGGCGAGGATCCTGCAGGCTCCGGCTTCGACATGGGCC
ATGGAGGGCGGGATGGAGGACGACGGACGTCCTACGCGCCCGTGTCTCTG
GAGGAGGGAGGGCTGCTGGCTGATGCCTTCGCGGAGGCCCCCACAAGTTA
CGAGGCTTTGTGTCGGAGGCACATGGACTCGTTCATGCGCGGCTTGGAGg
taccttccctccctccctccctcctttctctcccttcttcctctccctct
tctccttcctccctgcctccctcccttcgtctcgtccttgaataggtgga
tccccttcactccactccaagcactccattttcctccctcctctctcccc
tctcctccctccctccctatctccctccctccctccctccttccttagAC
CTACGCCCATGAGACGCAGCTGACTCGCCGCGTCGCCGACTGGCAGGACA
AAGTGGAGCCCCTGCTCGACGTCCAGgtacgtcctccctccctccctcct
ttccttccctcttccttccctgcacgctcctcatcctcagtctgtctcgc
cctctctccctctctcccccgtctcctccacacccctcctttaatgtcct
gcctgacgccccctctgaccaaggccttcgctcccccttcctccctccct
ccctccctccctccctctctcccagGAGCAACGCCTTCCCTTCGACATCC
ACCACTGCGGCGACGAAATCCTTGGCTGCCTCGAGAAGGAAAATCATTTC
CAGgtcggtttggttggccctccttccctcctttcctccctcctttccct
cagtttttctccgccactccctcctcatctttcaccttgtcatcactccc
tccatccctccttcatccctccctcccttcttccctcctatgcctccccc
ttcctttctacctatttccttcctccattcatcctcgctcatccctcttt
cgctccctccctccttccctcctcccctccctctttatacagGAGAAGGA
GAACGGCAGCAACGACAGCCTCTTTCCCTCTCCCAAAAAAGCTCCTTCTT
CTTCCTCCTCCACCGGCAAGGGCGAAAAGGAGGGAGGGGACGAGGGAGCG
GGGGAGGAAGGGTTGGACGTGGTGCGCTTCCAGGAGATGGTGTCGGGGAA
GGAGCAATACGAGGTCTGCCGCTTATTCCTAGCATCCCTGCAGCTGgtaa
ggagggagggtttggaggaggggagagtttgaagtcggtccattactgtt
ggggttgggggagatgggaatgagggcggaaaggacgaaatgaggaaaag
agtagggaaggggatggatagtttttgctctatccatgttagtaggtgac
cctccccccctccgcccgccttccctcccgccatccgttcagGCCAATAA
CGGAAACGTCCAGCTGGTGCACCAGGAGAGCGACAAGGACGCGAACGGTC
TCTCTTTCCGAATGAAGCTGCTGACGGATCAGCGCATGCACGAAAGGTTC
ACGGGCGCCGAGTTGGGGGAAAGTAAACATGAGCAAGCGAGTAAGAAGTA
A
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protein sequence of NO24G00050.1

>NO24G00050.1-protein ID=NO24G00050.1-protein|Name=NO24G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=739bp
MSDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLDGGQT
NLNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGS
HEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEKEQLKRRQQQQ
QQQSSFSSSSSSLDAPHCRPPLLVMEDHGNSFKVSTCTVHKSGALLMEES
LRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGREGGRE
GLRRLPWTGTTTTTISGGMARMTPGRPPSIGEEGREGMAGGGRSLRSAAV
VEGKEGRGEEEDDEEDEEEDDPWALLDPHDAGKGEARPFKKGKPAKPPAL
PKQSSSSSSSSSSSSVKSLYLPVILSLTGLSFPEFAPLAKTLEATLKGQA
RRAARSAASGAASSSSRDKATDKSRRRSMALYAALTAPAAMAEGRLAEVA
QMDMGEQGGEEGGREDEEEEDDDDVCGGAEAAWLDGGGDDGGWEEANEDE
DDYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSY
EALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDI
HHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGG
DEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESD
KDANGLSFRMKLLTDQRMHERFTGAELGESKHEQASKK*
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