NO24G00050.1, NO24G00050.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO24G00050.1
Unique Name	NO24G00050.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2217
Alignment location	chr24:12524..17624 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr24	genome	chr24:12524..17624 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO24G00050.1 vs.
Match: CBJ29522.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 260.4 bits (664), Expect = 1.700e-65
Identity = 258/773 (33.38%), Postives = 364/773 (47.09%), Query Frame = 0

Query:    2 SDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLDGGQTNLNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGSHEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEKEQLKRRQQQQQQQSSF-----------SSSSSSL----DAPHC-RPPLLVME-DHGNSFKVSTCTVHK-SGALLMEESLRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGREGGREGLRRLPWTGTTTTTISGGMARMTPGRP--------------------PSIGEEGREGMAGGGRSLRSAAVVEGKEGRGEEEDDEEDEEEDDPWALLDPHDAGKGEARPFKKGKPAKPPALPKQ------------SSSSSSSSSSSSVKSLYLPVILS--LTGLSFPEFAPLAKTLEATLKGQARRAARSAASGAASSSSRDKATDKSRRRSMALYAALTAPAAMAEGRLAEVAQMDMGEQGGEEGGREDEEEEDDDDVC---GGAEAAW---LDGGGDDGGWEEANEDEDDYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSYEALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDIHHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGGDEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESDKDANGLSFRMKLLTDQ 717
            SD EE RF H+LQPIRDLA+NWD+DIA+SLEDYL++L+ + I+LDGG + +NFAEAALLIQG+ C+YSRKVE+++ LV + +D L+      N     S + G  D  DD +  G       LD ++ EG+ ID+     + + R++     SS              +   L    D P   RPP+ +ME D+GNSFK+STC   + SG LL+E      L+  L  +     + +  +    +G G          +GG +   +G R   WTG+      G     + G                      P  G    EG   G R LR    +E       +E  + D+   DPWA LDPHD G  +ARP +KG+  K PA  ++                       S       V+LS  L GL++PEF  +        + + R+AA++  +       R +A     R                E  L E A  D    G  + G + +    D   C   GG  A +    DGGGD GG+                G G    +GG DG      AP+SLE      DAF   P +YE LCR H+++FMRG E YAHETQL++RV  WQ+K+EPL++ QE+R  FDIH  G  +L  +       ++      +    PK A  +++S     +E       E  + +V F  +V+GKE+++VCRLFLASLQLANNGNV+L H ++  D     FR++LLT Q
Sbjct:  111 SDREE-RFKHILQPIRDLAQNWDVDIATSLEDYLEDLEHITITLDGGASKVNFAEAALLIQGSTCVYSRKVEHVYQLVQRTIDFLTQQKQQNNNNAAKS-KSGDGDVGDDSIMGGDETAFLPLDDIILEGKHIDIGSTSSRSRNRRRSSIAPSSGFHGRGHGQGEDGGAGGGLPGGGDVPDITRPPMFLMEQDYGNSFKMSTCAPQQLSGTLLIEGGA---LDDSLFAQGDAETSEAARACDFWRGLGREG-------DGGLKARADGER---WTGSGMDMGGGDDGDDSDGGGGGFDGDFGPGDDFDDPRDDVPVDGPRTPEGSVSGRRELRQRESIE-------KEVLKADKAPIDPWAALDPHDPGTSQARPIRKGRTYKIPAQVRKRRGGKKIQGEAKGGGEEQKGDGGSWVGRDGRVMLSVPLLGLAYPEFQYVWN------RERQRKAAQTRLA-------RQQARGFMGR----------------EDFLPESAPPDSA--GMNDVGTDYDGYGSDGSYCSDGGGGYADYGDQSDGGGDMGGY----------------GDGGGEAYGGGDGEGDAGVAPISLE------DAFRNKPQTYEDLCRNHIEAFMRGTEKYAHETQLSKRVGAWQEKLEPLMESQEKRQAFDIHAYGQSVLSRVASVLTPAQRARAHTAAKGVHPKVADDAAASP----EEAVQADTAEPDVPLVDFGTVVAGKERFDVCRLFLASLQLANNGNVRLFHGDNAADQETTPFRLELLTLQ 804

The following BLAST results are available for this feature:

BLAST of NO24G00050.1 vs.

BLAST of NO24G00050.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ29522.1	1.700e-65	33.38	conserved unknown protein [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO24G00050	NO24G00050	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO24G00050.1	NO24G00050.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO24G00050.1.cds1	NO24G00050.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds2	NO24G00050.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds3	NO24G00050.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds4	NO24G00050.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds5	NO24G00050.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds6	NO24G00050.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds7	NO24G00050.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds8	NO24G00050.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds9	NO24G00050.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds10	NO24G00050.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds11	NO24G00050.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds12	NO24G00050.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds13	NO24G00050.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds14	NO24G00050.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds15	NO24G00050.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds16	NO24G00050.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds17	NO24G00050.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO24G00050.1.cds18	NO24G00050.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr24:12524..17624+
coding sequence from alignment at chr24:12524..17624+

mRNA sequence

>NO24G00050.1 ID=NO24G00050.1|Name=NO24G00050.1|organism=Nannochloropsis oceanica|type=mRNA|length=2217bp
ATGAGTGACAACGAGGAAGCACGCTTCTCCCACCTGCTCCAGCCCATTCG
AGATCTCGCCCGTAACTGGGACATTGACATCGCATCCTCCCTGGAGGACT
ACCTCGATGAGCTCGACGGGCTCAAGATCTCCCTGGATGGCGGTCAGACC
AACCTCAACTTTGCCGAGGCGGCCTTGCTGATTCAGGGCACTGCCTGCAT
CTACTCGCGGAAGGTGGAGTACCTTCATTCCCTCGTCTTCCAGGTTCTGG
ATCGCCTCTCGGGGCACATGGGCGGGGGCAACAAGAAGGGAAAGGGTTCT
CACGAGGACGGTGGGAAAGATAACGATGATGATCTCGTGCCCGCGGGGGC
AGCTGACCCTCTCTGTCTGCTCGACGCAGTGCTCGAGGAGGGGAGAGACA
TCGACTTGAAGCTGGAAAAGGAGCAGCTGAAGCGCCGGCAGCAGCAGCAG
CAGCAGCAGTCCTCCTTCTCCTCCTCCTCCTCCTCCCTCGATGCGCCTCA
CTGCCGCCCTCCCCTCCTGGTCATGGAGGACCACGGCAACTCATTCAAGG
TCTCCACCTGCACCGTACACAAGTCGGGCGCACTGCTGATGGAAGAGTCC
TTGCGACGGGAGCTGGAGCCGGACTTGAAGGAGAAGAGGAAGGGCAGCCG
GGCCGCGTCAAACTACTCCCACTCCTTGACACAGGGCCACGGCCTCCATG
CCTCTCAACCTCCTGTCCACCAGGAAGGGGGGAGAGAGGGAGGGAGGGAG
GGGCTGAGGCGCCTCCCGTGGACAGGGACGACGACCACGACGATTTCGGG
GGGAATGGCGCGGATGACGCCTGGGCGGCCGCCCTCCATCGGAGAGGAAG
GGAGGGAGGGAATGGCAGGAGGGGGGAGGTCCTTGCGGAGCGCGGCGGTT
GTGGAAGGGAAGGAGGGAAGGGGGGAAGAGGAGGACGACGAGGAGGACGA
GGAAGAGGATGATCCCTGGGCGCTCTTAGACCCGCACGACGCCGGGAAGG
GGGAGGCGAGGCCTTTTAAGAAAGGCAAACCAGCCAAGCCCCCTGCCCTC
CCCAAGCAGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGTCAA
GAGCCTCTACCTGCCCGTCATCCTCTCCCTCACCGGCCTCTCCTTCCCTG
AATTCGCCCCCCTCGCCAAGACCCTTGAAGCCACGCTGAAGGGACAGGCT
CGCCGCGCAGCCCGTTCAGCTGCTTCTGGTGCTGCTTCTTCCTCCTCCCG
CGACAAGGCCACGGACAAAAGTCGCCGTCGCTCGATGGCTCTTTATGCCG
CCCTCACCGCCCCTGCTGCCATGGCGGAAGGACGCCTGGCCGAGGTGGCT
CAGATGGATATGGGAGAGCAGGGAGGAGAGGAGGGCGGGAGGGAGGACGA
GGAGGAGGAGGACGACGACGACGTGTGTGGAGGGGCGGAAGCGGCCTGGC
TGGATGGAGGGGGGGATGACGGCGGGTGGGAGGAAGCGAATGAGGACGAG
GACGACTACCGAGGCGAGGATCCTGCAGGCTCCGGCTTCGACATGGGCCA
TGGAGGGCGGGATGGAGGACGACGGACGTCCTACGCGCCCGTGTCTCTGG
AGGAGGGAGGGCTGCTGGCTGATGCCTTCGCGGAGGCCCCCACAAGTTAC
GAGGCTTTGTGTCGGAGGCACATGGACTCGTTCATGCGCGGCTTGGAGAC
CTACGCCCATGAGACGCAGCTGACTCGCCGCGTCGCCGACTGGCAGGACA
AAGTGGAGCCCCTGCTCGACGTCCAGGAGCAACGCCTTCCCTTCGACATC
CACCACTGCGGCGACGAAATCCTTGGCTGCCTCGAGAAGGAAAATCATTT
CCAGGAGAAGGAGAACGGCAGCAACGACAGCCTCTTTCCCTCTCCCAAAA
AAGCTCCTTCTTCTTCCTCCTCCACCGGCAAGGGCGAAAAGGAGGGAGGG
GACGAGGGAGCGGGGGAGGAAGGGTTGGACGTGGTGCGCTTCCAGGAGAT
GGTGTCGGGGAAGGAGCAATACGAGGTCTGCCGCTTATTCCTAGCATCCC
TGCAGCTGGCCAATAACGGAAACGTCCAGCTGGTGCACCAGGAGAGCGAC
AAGGACGCGAACGGTCTCTCTTTCCGAATGAAGCTGCTGACGGATCAGCG
CATGCACGAAAGGTTCACGGGCGCCGAGTTGGGGGAAAGTAAACATGAGC
AAGCGAGTAAGAAGTAA

protein sequence of NO24G00050.1

>NO24G00050.1-protein ID=NO24G00050.1-protein|Name=NO24G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=739bp
MSDNEEARFSHLLQPIRDLARNWDIDIASSLEDYLDELDGLKISLDGGQT
NLNFAEAALLIQGTACIYSRKVEYLHSLVFQVLDRLSGHMGGGNKKGKGS
HEDGGKDNDDDLVPAGAADPLCLLDAVLEEGRDIDLKLEKEQLKRRQQQQ
QQQSSFSSSSSSLDAPHCRPPLLVMEDHGNSFKVSTCTVHKSGALLMEES
LRRELEPDLKEKRKGSRAASNYSHSLTQGHGLHASQPPVHQEGGREGGRE
GLRRLPWTGTTTTTISGGMARMTPGRPPSIGEEGREGMAGGGRSLRSAAV
VEGKEGRGEEEDDEEDEEEDDPWALLDPHDAGKGEARPFKKGKPAKPPAL
PKQSSSSSSSSSSSSVKSLYLPVILSLTGLSFPEFAPLAKTLEATLKGQA
RRAARSAASGAASSSSRDKATDKSRRRSMALYAALTAPAAMAEGRLAEVA
QMDMGEQGGEEGGREDEEEEDDDDVCGGAEAAWLDGGGDDGGWEEANEDE
DDYRGEDPAGSGFDMGHGGRDGGRRTSYAPVSLEEGGLLADAFAEAPTSY
EALCRRHMDSFMRGLETYAHETQLTRRVADWQDKVEPLLDVQEQRLPFDI
HHCGDEILGCLEKENHFQEKENGSNDSLFPSPKKAPSSSSSTGKGEKEGG
DEGAGEEGLDVVRFQEMVSGKEQYEVCRLFLASLQLANNGNVQLVHQESD
KDANGLSFRMKLLTDQRMHERFTGAELGESKHEQASKK*

mRNA from alignment at chr24:12524..17624+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO24G00050.1 ID=NO24G00050.1|Name=NO24G00050.1|organism=Nannochloropsis oceanica|type=mRNA|length=5101bp|location=Sequence derived from alignment at chr24:12524..17624+ (Nannochloropsis oceanica)
ATGAGTGACAACGAGGAAGCACGCTTCTCCCACCTGCTCCAGCCCATTCG
GTGAGAACAAAGGAAACTAGGGAGTGGGGAAGGGAGGGAGAGAACGGGGC
ATGAAGAGGAGACACCCTGCTGGGCTTAAGTGGCTAAGATATACACGCGC
GCTACGCCGCCTTTCTCCCCCTTCTTAACATCTCTCTATCGTCTACCCTG
CCTTCTATTGGTTGCATGCGCACTCTCACCTCTTTCTTCCCCCTCCAACC
GCCTCCCCATCCCTTCTGCATCACACAGAGATCTCGCCCGTAACTGGGAC
ATTGACATCGCATCCTCCCTGGAGGACTACCTCGATGAGCTCGACGGGCT
CAAGATCTCCCTGGATGGCGGTCAGACCAACCTCAACTTTGCCGAGGCGG
CCTTGCTGATTCAGGTGCATGAGGCGGAGGGAGGGAGGGAGGGAAGAAGG
GAAGGAGGGATTGAAGGTATGAAAATGTGGGTCTGCGCGCAAAACAAACG
ACCCGGGGTCAAGAGGAAAGTCAACGTTTTAAGAGGAGTCGCTTCTTCAG
GAAAGGCTGCTCTCTTTCCCCGCCCAATCCCTTATCCCCTCCCTTCCTCC
CCTCCCTTCCTCCCTCCCTCGACCATAGGGCACTGCCTGCATCTACTCGC
GGAAGGTGGAGTACCTTCATTCCCTCGTCTTCCAGGTAAGCCCCTCCCGC
CCTCCCCTTTCTCTTCTCTTCTCCTTCTCTCGGTCCTCCCGTTACCCATC
CCATTCTCATTCCCTCCCACTTCTCCCCACCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCAGGTTCTGGATCGCCTCTCGGGGCACA
TGGGCGGGGGCAACAAGAAGGGAAAGGGTTCTCACGAGGACGGTGGGAAA
GGTATTATTACTATGGGCTTTCCCTCCTCTCCTCCCTCCATCTTTTTCTC
GCCTCCCTCCCTCCCTCCCGGCGGGAAACAAACACCCGTCCGCCAAGAGT
CCTGGCTGGGATGGCCGTCTAACCTCCCTACCCCCTCCCTCCCTAGATAA
CGATGATGATCTCGTGCCCGCGGGGGCAGCTGACCCTCTCTGTCTGCTCG
ACGCAGTGCTCGAGGAGGGGAGAGACATCGACTTGAAGTAAGGAGGGAGG
GAGGGAGAAAGGGAGGAAGGGGGAGTAAGCTCTTGAATCACCAGTATTCC
CACACATCCTCCCCGTCGCTGACCATCGGTATCCTCCTTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCGCCCCAGGCTGGAAAAGGAGCAGCTGAA
GCGCCGGCAGCAGCAGCAGCAGCAGCAGTCCTCCTTCTCCTCCTCCTCCT
CCTCCCTCGATGCGCCTCACTGCCGCCCTCCCCTCCTGGTCATGGAGGAC
CACGGCAACTCATTCAAGGTCTCCACCTGCACCGTACACAAGGTACGCAT
GTCCCTCCCTTCCTCCCGCCCTCCCTCCCTCCCTCCCTCCCGTCCTGCTT
TCATTTCTTCTCCTTCGCAGCTTCCCTTTCCCCCCCTCCATCCCACCTCC
CCCTCCCTCGCCTCCTCTCCTCCTCCCTCCCCCCTCTCCCCCTCCGTCCG
TCCAGAAAATGACATAACCACTACTCTTCTCCCCCCCTTCCCTCCCCCCT
CTCTCCCTCCCTTCCCCAGTCGGGCGCACTGCTGATGGAAGAGTCCTTGC
GACGGGAGCTGGAGCCGGACTTGAAGGAGAAGAGGAAGGGCAGCCGGGCC
GCGTCAAACTACTCCCACTCCTTGACACAGGTAGCACAGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGGGGGACGAAGGGAAGGCGGGACGGACAGT
AACTAGACGGCCATCGTTTGACAGTGGAGCTAAACCGCCACCCTCCCGCT
TCCGCCCTCCCTCTCTCCCTTCCCTCCCTCCTCCCCTTCGGGTCCAGGGC
CACGGCCTCCATGCCTCTCAACCTCCTGTCCACCAGGAAGGGGGGAGAGA
GGGAGGGAGGGAGGGGCTGAGGCGCCTCCCGTGGACAGGGACGACGACCA
CGACGATTTCGGGGGGAATGGTTAGTCCTCCCTCTCTCCCTCCCTCCCTC
CCTCCTCCCTCCCTCCCTACCTCCCTACCTCCCTCCCTCCCTACCTTGTC
GCCTGTTGACTCATCTCATCCCAAACACTCCCCGATCCCAACTCACTCAC
TATTTCCCTTCCCTCCCTCCCTCCCCTTCTCCTTCAGGCGCGGATGACGC
CTGGGCGGGTGGGGATGGCTCAGCATGGGGCTCGGGGGAGCACGAGGAGT
TTGCAGCTCCGCCCTCCCTCCAGCCGCCCTCCATCGGAGAGGAAGGGAGG
GAGGGAATGGCAGGAGGGGGGAGGTCCTTGCGGAGCGCGGCGGTTGTGGA
AGGGAAGGAGGGAAGGGGGGAAGAGGAGGACGACGAGGAGGACGAGGAAG
AGGATGATCCCTGGGCGCTCTTAGACCCGCACGACGCCGGGAAGGGGGAG
GCGAGGCCTTTTAAGAAAGGTAGGGAAGGAGGGAGGGAGGGAGGGAGGGA
GGGAAAGGCGTCTGGTTTGTTGTTCAATACATGATCCATCTCCTCTATTA
CTGGTCGCTCACCGCCCACCCCCCTCTCCCTTCCTTCCCTCTCGTTCTCC
ATCCCTTCCTCACAGGCAAACCAGCCAAGCCCCCTGCCCTCCCCAAGCAG
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGTCAAGAGCCTCTA
CCTGCCCGTCATCCTCTCCCTCACCGGCCTCTCCTTCCCTGAATTCGCCC
CCCTCGCCAAGACCCTTGAAGCCACGCTGAAGGGACAGGTACGCTACCCT
TCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTCTTCCGTTTCCCT
TTACACTCCTCCCCTCCACCCGCCCTCCTCTTCTCCTTCCCTTTCCCTAC
CTCCCTTCACCTGCAGGCTCGCCGCGCAGCCCGTTCAGCTGCTTCTGGTG
CTGCTTCTTCCTCCTCCCGCGACAAGGCCACGGACAAAAGTCGCCGTCGC
TCGATGGCTCTTTATGCCGCCCTCACCGCCCCTGCTGCCATGGCGGTGCG
TCCCTCCCTCCCTTCCTCCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCTGATCACTGCGGCGTGTGCATGATAATAGAACAGCAACTCTT
CTCATTCCCTTCCTCTTCCCTGCCTCCCTTCCCCCTCCCTCCCTCTCCCT
CTACAGGAAGGACGCCTGGCCGAGGTGGCTCAGATGGATATGGGAGAGCA
GGGAGGAGAGGAGGGCGGGAGGGAGGACGAGGAGGAGGAGGACGACGACG
ACGTGTGTGGAGGGGCGGAAGCGGCCTGGCTGGATGGAGGGGGGGATGAC
GGCGGGTGGGAGGAAGCGAATGAGGACGAGGACGACTACCGGTACGTACC
ACCCTCTGTCGGTGCCCTCCCTCCCTCCCTCCCTCCCTCCCGCGAGTTTT
GTGTCGGCTCCTGCAAGTCTTTTCTAACCACGTTCCCCCCTCCCTCCCCC
CCCCTCCGTCAGAGGCGAGGATCCTGCAGGCTCCGGCTTCGACATGGGCC
ATGGAGGGCGGGATGGAGGACGACGGACGTCCTACGCGCCCGTGTCTCTG
GAGGAGGGAGGGCTGCTGGCTGATGCCTTCGCGGAGGCCCCCACAAGTTA
CGAGGCTTTGTGTCGGAGGCACATGGACTCGTTCATGCGCGGCTTGGAGG
TACCTTCCCTCCCTCCCTCCCTCCTTTCTCTCCCTTCTTCCTCTCCCTCT
TCTCCTTCCTCCCTGCCTCCCTCCCTTCGTCTCGTCCTTGAATAGGTGGA
TCCCCTTCACTCCACTCCAAGCACTCCATTTTCCTCCCTCCTCTCTCCCC
TCTCCTCCCTCCCTCCCTATCTCCCTCCCTCCCTCCCTCCTTCCTTAGAC
CTACGCCCATGAGACGCAGCTGACTCGCCGCGTCGCCGACTGGCAGGACA
AAGTGGAGCCCCTGCTCGACGTCCAGGTACGTCCTCCCTCCCTCCCTCCT
TTCCTTCCCTCTTCCTTCCCTGCACGCTCCTCATCCTCAGTCTGTCTCGC
CCTCTCTCCCTCTCTCCCCCGTCTCCTCCACACCCCTCCTTTAATGTCCT
GCCTGACGCCCCCTCTGACCAAGGCCTTCGCTCCCCCTTCCTCCCTCCCT
CCCTCCCTCCCTCCCTCTCTCCCAGGAGCAACGCCTTCCCTTCGACATCC
ACCACTGCGGCGACGAAATCCTTGGCTGCCTCGAGAAGGAAAATCATTTC
CAGGTCGGTTTGGTTGGCCCTCCTTCCCTCCTTTCCTCCCTCCTTTCCCT
CAGTTTTTCTCCGCCACTCCCTCCTCATCTTTCACCTTGTCATCACTCCC
TCCATCCCTCCTTCATCCCTCCCTCCCTTCTTCCCTCCTATGCCTCCCCC
TTCCTTTCTACCTATTTCCTTCCTCCATTCATCCTCGCTCATCCCTCTTT
CGCTCCCTCCCTCCTTCCCTCCTCCCCTCCCTCTTTATACAGGAGAAGGA
GAACGGCAGCAACGACAGCCTCTTTCCCTCTCCCAAAAAAGCTCCTTCTT
CTTCCTCCTCCACCGGCAAGGGCGAAAAGGAGGGAGGGGACGAGGGAGCG
GGGGAGGAAGGGTTGGACGTGGTGCGCTTCCAGGAGATGGTGTCGGGGAA
GGAGCAATACGAGGTCTGCCGCTTATTCCTAGCATCCCTGCAGCTGGTAA
GGAGGGAGGGTTTGGAGGAGGGGAGAGTTTGAAGTCGGTCCATTACTGTT
GGGGTTGGGGGAGATGGGAATGAGGGCGGAAAGGACGAAATGAGGAAAAG
AGTAGGGAAGGGGATGGATAGTTTTTGCTCTATCCATGTTAGTAGGTGAC
CCTCCCCCCCTCCGCCCGCCTTCCCTCCCGCCATCCGTTCAGGCCAATAA
CGGAAACGTCCAGCTGGTGCACCAGGAGAGCGACAAGGACGCGAACGGTC
TCTCTTTCCGAATGAAGCTGCTGACGGATCAGCGCATGCACGAAAGGTTC
ACGGGCGCCGAGTTGGGGGAAAGTAAACATGAGCAAGCGAGTAAGAAGTA
A

Coding sequence (CDS) from alignment at chr24:12524..17624+

>NO24G00050.1 ID=NO24G00050.1|Name=NO24G00050.1|organism=Nannochloropsis oceanica|type=CDS|length=2217bp|location=Sequence derived from alignment at chr24:12524..17624+ (Nannochloropsis oceanica)
ATGAGTGACAACGAGGAAGCACGCTTCTCCCACCTGCTCCAGCCCATTCG
AGATCTCGCCCGTAACTGGGACATTGACATCGCATCCTCCCTGGAGGACT
ACCTCGATGAGCTCGACGGGCTCAAGATCTCCCTGGATGGCGGTCAGACC
AACCTCAACTTTGCCGAGGCGGCCTTGCTGATTCAGGGCACTGCCTGCAT
CTACTCGCGGAAGGTGGAGTACCTTCATTCCCTCGTCTTCCAGGTTCTGG
ATCGCCTCTCGGGGCACATGGGCGGGGGCAACAAGAAGGGAAAGGGTTCT
CACGAGGACGGTGGGAAAGATAACGATGATGATCTCGTGCCCGCGGGGGC
AGCTGACCCTCTCTGTCTGCTCGACGCAGTGCTCGAGGAGGGGAGAGACA
TCGACTTGAAGCTGGAAAAGGAGCAGCTGAAGCGCCGGCAGCAGCAGCAG
CAGCAGCAGTCCTCCTTCTCCTCCTCCTCCTCCTCCCTCGATGCGCCTCA
CTGCCGCCCTCCCCTCCTGGTCATGGAGGACCACGGCAACTCATTCAAGG
TCTCCACCTGCACCGTACACAAGTCGGGCGCACTGCTGATGGAAGAGTCC
TTGCGACGGGAGCTGGAGCCGGACTTGAAGGAGAAGAGGAAGGGCAGCCG
GGCCGCGTCAAACTACTCCCACTCCTTGACACAGGGCCACGGCCTCCATG
CCTCTCAACCTCCTGTCCACCAGGAAGGGGGGAGAGAGGGAGGGAGGGAG
GGGCTGAGGCGCCTCCCGTGGACAGGGACGACGACCACGACGATTTCGGG
GGGAATGGCGCGGATGACGCCTGGGCGGCCGCCCTCCATCGGAGAGGAAG
GGAGGGAGGGAATGGCAGGAGGGGGGAGGTCCTTGCGGAGCGCGGCGGTT
GTGGAAGGGAAGGAGGGAAGGGGGGAAGAGGAGGACGACGAGGAGGACGA
GGAAGAGGATGATCCCTGGGCGCTCTTAGACCCGCACGACGCCGGGAAGG
GGGAGGCGAGGCCTTTTAAGAAAGGCAAACCAGCCAAGCCCCCTGCCCTC
CCCAAGCAGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGTCAA
GAGCCTCTACCTGCCCGTCATCCTCTCCCTCACCGGCCTCTCCTTCCCTG
AATTCGCCCCCCTCGCCAAGACCCTTGAAGCCACGCTGAAGGGACAGGCT
CGCCGCGCAGCCCGTTCAGCTGCTTCTGGTGCTGCTTCTTCCTCCTCCCG
CGACAAGGCCACGGACAAAAGTCGCCGTCGCTCGATGGCTCTTTATGCCG
CCCTCACCGCCCCTGCTGCCATGGCGGAAGGACGCCTGGCCGAGGTGGCT
CAGATGGATATGGGAGAGCAGGGAGGAGAGGAGGGCGGGAGGGAGGACGA
GGAGGAGGAGGACGACGACGACGTGTGTGGAGGGGCGGAAGCGGCCTGGC
TGGATGGAGGGGGGGATGACGGCGGGTGGGAGGAAGCGAATGAGGACGAG
GACGACTACCGAGGCGAGGATCCTGCAGGCTCCGGCTTCGACATGGGCCA
TGGAGGGCGGGATGGAGGACGACGGACGTCCTACGCGCCCGTGTCTCTGG
AGGAGGGAGGGCTGCTGGCTGATGCCTTCGCGGAGGCCCCCACAAGTTAC
GAGGCTTTGTGTCGGAGGCACATGGACTCGTTCATGCGCGGCTTGGAGAC
CTACGCCCATGAGACGCAGCTGACTCGCCGCGTCGCCGACTGGCAGGACA
AAGTGGAGCCCCTGCTCGACGTCCAGGAGCAACGCCTTCCCTTCGACATC
CACCACTGCGGCGACGAAATCCTTGGCTGCCTCGAGAAGGAAAATCATTT
CCAGGAGAAGGAGAACGGCAGCAACGACAGCCTCTTTCCCTCTCCCAAAA
AAGCTCCTTCTTCTTCCTCCTCCACCGGCAAGGGCGAAAAGGAGGGAGGG
GACGAGGGAGCGGGGGAGGAAGGGTTGGACGTGGTGCGCTTCCAGGAGAT
GGTGTCGGGGAAGGAGCAATACGAGGTCTGCCGCTTATTCCTAGCATCCC
TGCAGCTGGCCAATAACGGAAACGTCCAGCTGGTGCACCAGGAGAGCGAC
AAGGACGCGAACGGTCTCTCTTTCCGAATGAAGCTGCTGACGGATCAGCG
CATGCACGAAAGGTTCACGGGCGCCGAGTTGGGGGAAAGTAAACATGAGC
AAGCGAGTAAGAAGTAA

Synonyms

Publications