|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr24 | genome | chr24:4044..6748 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO24G00020 vs. NCBI_GenBank
Match: EWM20448.1 (hypothetical protein Naga_101516g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 108.2 bits (269), Expect = 1.000e-19 Identity = 89/241 (36.93%), Postives = 121/241 (50.21%), Query Frame = 0
Query: 102 RARRSKCVSGPVEGPWAGMKGWECRSMSVEVAKMLLKMEKGQLGEDLRQCNLAARARRAAVREEMILVTTEEAEMVDQARVLVLAEETEKQEKSALPLSPTKIKTKTQNIAVTATGSPVAMDVGGLSGSSSCSNKLPPIPLPPTEALVEERPVSKALMACVMAREAKSRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSALPRGSLVGRVQAAYFKQVPVKVTMEEARQLDELAVE 343
++RR V P EGPWAG+ GWE R MS EVA ML +M+ + + +LA RA+RA R++M+LVTT EA +++ AR A E++EK+AL ++ V A G + GG + + LP E LVEER VSK +MA VM+REA++R ALP+GS VGRVQAAY K V++T+EE + D L E
Sbjct: 112 QSRRPSAVPEPSEGPWAGLDGWESRRMSREVASMLKRMDAEARTKGEKPGSLATRAQRALNRQQMVLVTTAEAGVIELAR----ARVAEEREKAAL-------RSPLLQSTVAAQGE---REGGGAA----------RLALPAPETLVEEREVSKRMMAKVMSREARAR--------------------------GGGRERPGPALPKGSWVGRVQAAYAKCEKVRLTVEETKDWDALVEE 302
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00020 ID=NO24G00020|Name=NO24G00020|organism=Nannochloropsis oceanica|type=gene|length=2705bp
TCCGGAAGGGACACGATGCTCTGTAGTACTTTCTTGTCTGTCTTGTGTGT
TGTGATGGCGTTCGAAAAGGTGAGCCACACCCCGGAGCTCCGTGTTGCGG
GATCAAAATGCTTTGAGACCGCATAGCATTCAAATCATTGGGACGGTGGG
GGGAAGCGGGGGCATAAAATAGACAAAGGGTTTGACTCAAGGTGTGTTTT
GTTGGGAACGTACCATCTTTTTCGGTTTCTTCAAAGTTTTGAGTCCCATT
CATATTCTTCTTATTTGATCCTGTTCTCTCGCTATCTTCCCTCCTCTATC
CGGACACACCCGGTACCGAAGTTATGCTGATCTCTATCTTCTCTGCTTGA
TATAGTGCTCATCCTTGTCGCTTACCCCACACACAGCGAGCAAGGCATGC
AGCAGACAAGTCGTAAGCTCTCGAGCCCGCATCATCAGCCATCCGATTCC
CCTCCTCTTTTTTGATGCCCACCACTATCCCACGCTCATCATCAACTGGC
TTGCAAATTCATGACTATTGAGGAGAGCATGGTTGAGGAGAGCATTGTTA
AAAGCATCGTGTCGATCGAAATATGTAAAGACGGGGTCTTTACCTTAGAC
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAAGACATGC
GAGAGCGAATTCAAGAGCAAGCATTGAAGGAGCAGCGGCCAGGGGAGGAG
CAGCAGCAACAAGTTGGGCAAACCGAGGGGGAGAAGCAAACCGCAGAATT
TCTCCTCCTCCGGCGAGCACGTCGTTCCAAATGTGTTTCTGGACCTGTAG
AGGGGCCTTGGGCTGGCATGAAAGGGTGGGAGTGCCGTTCAATGAGCGTA
GAAGTGGCCAAGATGCTGCTCAAAATGGAGAAAGGCCAGCTGGGCGAGGA
CTTACGACAGTGCAATCTGGCGGCGCGGGCCCGGAGGGCGGCGGTGCGGG
AGGAGATGATTCTAGTGACGACAGAGGAGGCAGAGATGGTGGACCAAGCC
CGGGTGCTAGTGCTGGCCGAGGAGACTGAGAAGCAGGAAAAGAGCGCCCT
GCCGCTGTCGCCGACGAAGATCAAGACGAAGACGCAGAATATAGCAGTAA
CCGCAACGGGCTCCCCGGTAGCCATGGATGTGGGAGGTCTGTCGGGCAGC
AGCAGCTGTAGCAACAAGCTCCCGCCTATCCCCTTGCCCCCAACTGAGGC
CCTGGTGGAGGAGCGACCAGTGAGCAAGGCCTTGATGGCATGCGTAATGG
CCCGGGAAGCCAAGTCCCGCTTCGCCGCCGCCGCCTCCGCAGCAGCAGCA
GCCGCGCCTGGTGGAGGAAATGCAGCAACAGCAAAGGACGCAGCATCAGC
AGTAGTAGCAGTAGTAGCACCATCTGCATTACCGAGGGGGTCGCTTGTGG
GGCGGGTGCAGGCGGCTTACTTCAAGCAGGTGCCCGTGAAGGTGACGATG
GAAGAGGCAAGGCAGTTGGATGAGCTCGCCGTGGAAGAGGCGGAGATGGT
GGAGAAGGAGAGGCTGAAAAAGGATAGGGAGCAGCGGCAGCAGCCGCTCC
AGCAGCGGCTGCAGCAGGAAAAGGAGTTGGCAGCGCTGGCGGCGGCAATG
AAGGAGAAGGAGAAGGAGAAGGCCACGGTGTCACTGCGTGGGGAGGTTGG
GGTAAAGGAGGAGAGGATGATGCAGCTGCTGAACATAAATGACAAGGCGG
TCGACGAGAAGGAACAGGGCGAAGGAGGGAGGGAAGAACAAGTGCGGGCG
GGGAGAGGGGAGGAGATTAGTCGAAAGCGAACAGCCTGTGCTGCCTCTGG
CCAGGCCTCCTTTGAACAGGAAAGCGGACGCACCAGCGACCTTACCGCGA
CAGCAACAAACCCCTCTTCCTTCCCCTCATCCCCCAAGACCACCCTCGCA
GAGGACGGAGGCGAGATCGTGCGTGTCTCGCCCGAGCTGTGCCGTGCCCT
AATGACGCTCTGCCCCAACGCGGCCCGGGACTCGCTCACCGCCAAGGTCC
AGTCGGCAGTCATGTCGCAGAAGGATAGCTTGCACCTCCCTCCCCCACTC
CCTCCCTCGTCTTCCCCGGGCTTGAGGCCGGCGGAGCGCGTGCTGCTGGC
CCAGGCGCAGGCCATGGTGGAAGAGGGCTTGTTGGAGCCCGGCATGAAAG
CCGAGAGGAAGAAGAAGGTGAAGCTGCTGGCGACTGGCCAGGCCATAAAG
GAGAATGGGCTGGAGGGGAAAAGAGGGAGTGAAGGAGATGGAGGAGAAGA
AAGTAAAGGAGAAGGAGGGACAGGGTTGTTTTCTGTGTTGCTTACGCGGG
AGGGGATCGGGGCGGTGCAGGCATGGGAGGCCAAGGCAGGGGAGAAAGTG
ACGAGCTCCTCCCTTTCCTCGCGACTTATGGCCTTGTTCACGCGACAGAT
TACTGTCTTCCGTACGGACGACGCGCAGGAGGCAAGAAAGGTGGAGGAGG
CCGAGAGGGAGGGGGAGGGTAAGCGCCAGAGGCGGGAGGCAGCCCTGCGG
ATTCAGCAGAAGCAGACGGGAATGAAGGAGTGAGAGAAGGAGGAAGGGGA
AAGGGGGGAAAGAAGGAGGGACAGGGCAACAAGGCAATTGGTGGGGTTGG
TGGTATAGCTCTGTCAATGGATGAGAATTGATGATTGGGAGACGTTGAGA
GGGGA back to topprotein sequence of NO24G00020.1 >NO24G00020.1-protein ID=NO24G00020.1-protein|Name=NO24G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=691bp
MTIEESMVEESIVKSIVSIEICKDGVFTLDKQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQDMRERIQEQALKEQRPGEEQQQQVGQTEGEKQTAEFLLL
RRARRSKCVSGPVEGPWAGMKGWECRSMSVEVAKMLLKMEKGQLGEDLRQ
CNLAARARRAAVREEMILVTTEEAEMVDQARVLVLAEETEKQEKSALPLS
PTKIKTKTQNIAVTATGSPVAMDVGGLSGSSSCSNKLPPIPLPPTEALVE
ERPVSKALMACVMAREAKSRFAAAASAAAAAAPGGGNAATAKDAASAVVA
VVAPSALPRGSLVGRVQAAYFKQVPVKVTMEEARQLDELAVEEAEMVEKE
RLKKDREQRQQPLQQRLQQEKELAALAAAMKEKEKEKATVSLRGEVGVKE
ERMMQLLNINDKAVDEKEQGEGGREEQVRAGRGEEISRKRTACAASGQAS
FEQESGRTSDLTATATNPSSFPSSPKTTLAEDGGEIVRVSPELCRALMTL
CPNAARDSLTAKVQSAVMSQKDSLHLPPPLPPSSSPGLRPAERVLLAQAQ
AMVEEGLLEPGMKAERKKKVKLLATGQAIKENGLEGKRGSEGDGGEESKG
EGGTGLFSVLLTREGIGAVQAWEAKAGEKVTSSSLSSRLMALFTRQITVF
RTDDAQEARKVEEAEREGEGKRQRREAALRIQQKQTGMKE* back to top
|