NO23G01910, NO23G01910 (gene) Nannochloropsis oceanica

Overview
NameNO23G01910
Unique NameNO23G01910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3600
Alignment locationchr23:689971..693570 +

Link to JBrowse

Properties
Property NameValue
DescriptionObg-like ATPase 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:689971..693570 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR012676TGS-like
IPR031167G_OBG
IPR013029DUF933
IPR006073GTP_binding_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO23G01910 vs. NCBI_GenBank
Match: EWM27850.1 (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 694.5 bits (1791), Expect = 2.100e-196
Identity = 357/410 (87.07%), Postives = 379/410 (92.44%), Query Frame = 0
Query:   53 SAFIRPSTAPWLAGTRRRFAA------------------GAGHQVTMKLKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKDKTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFN 445
            SAFIRP   PW  G +R+ AA                   +GHQ++MKL+AGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALA IAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFE+DD++HVSGSVDPERDME+INLELALSDL+QVEKRLQRALKDK+VTQ ERDGLQ+VYDALA+GKPAR+ILP LSEDELADVGRLGLLTGMKVIYAANVGD+ELATGNKYV+KVREVA ++GAGVV+VSAQVE+ELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMS EDLVALGSEKAVKDAGKLRSEGK+YVCKEGDVMLFRFN
Sbjct:   62 SAFIRPFVKPWSGGAQRQLAAAIQSSAIRPLHPPCPLSQASGHQISMKLRAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALANIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFENDDIVHVSGSVDPERDMEVINLELALSDLAQVEKRLQRALKDKSVTQAERDGLQRVYDALAEGKPAREILPFLSEDELADVGRLGLLTGMKVIYAANVGDAELATGNKYVDKVREVAAKEGAGVVLVSAQVEAELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSCEDLVALGSEKAVKDAGKLRSEGKEYVCKEGDVMLFRFN 471          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: XP_005854045.1 (gtp-binding protein [Nannochloropsis gaditana CCMP526] >EKU22316.1 gtp-binding protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 547.0 bits (1408), Expect = 5.500e-152
Identity = 295/393 (75.06%), Postives = 319/393 (81.17%), Query Frame = 0
Query:   53 SAFIRPSTAPWLAGTRRRFAAGAGHQVTMKLKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKDKTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            SAFIRP   PW  G +R+ AA +GHQ++MKL+AGIVGLPNVGKSTLFNALTGGATAQAA  P      +V       P+                       A L    S                  I QVIRCFE+DD++HVSGSVDPERDME+INLELALSDL+QVEKRLQRALKDK+VTQ ERDGLQ+VYDALA+GKPAR+ILP LSEDELADVGRLGLLTGMKVIYAANVGD+ELATGNKYV+KVREVA ++GAGVV+VSAQVE+ELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMS EDLVALGSEKAVKDAGKLRSEGK+YVCKEGDVMLFRFNV
Sbjct:   62 SAFIRPFVKPWSGGAQRQLAAVSGHQISMKLRAGIVGLPNVGKSTLFNALTGGATAQAAKSP-----THVFWLSPTSPK-----------------------ASLCYPPSSNSW--------------ISQVIRCFENDDIVHVSGSVDPERDMEVINLELALSDLAQVEKRLQRALKDKSVTQAERDGLQRVYDALAEGKPAREILPFLSEDELADVGRLGLLTGMKVIYAANVGDAELATGNKYVDKVREVAAKEGAGVVLVSAQVEAELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSCEDLVALGSEKAVKDAGKLRSEGKEYVCKEGDVMLFRFNV 412          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: CBJ27603.1 (PYchF, plastid YchF-like GTPase [Ectocarpus siliculosus])

HSP 1 Score: 482.6 bits (1241), Expect = 1.300e-132
Identity = 253/395 (64.05%), Postives = 298/395 (75.44%), Query Frame = 0
Query:   57 RPSTAPW------LAGTRRRFAAGAGHQVTMKLKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKDKTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            RP +  W       A  RR+  +      TMKLK GIVG+PNVGKSTLFNA+T    A  AN+PF TIEPN+G+ EVPD RL  LA I KS   +P+ L+F DIAGLVKGAS+GEGLGN+FLANIRECDAIV V+RCFED D+IHV GSVDP RD++IIN+ELAL+D++QVEKRLQ+  KDK  T  E+ GL K+   L +GKP R +   L+E+E  D   LGLLT  KVIYA NV DS+LA GN  V+ VR+ AE +GA VVIVSAQVESELV+L  ED++EFLESLGV EE CGLRALVKE Y+ LGLQTYFT G  ET+AWTI  G TAP+AAGVIHSDFE+GFIRAE + +EDLV  GSEKA K+ G LRSEGK+YV +EGDV+ FRFNV
Sbjct:   21 RPPSTIWGVKVAGQAAMRRQVGSPVRSSSTMKLKTGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLKVLAEINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFEDPDIIHVEGSVDPVRDIDIINIELALADMAQVEKRLQKVAKDKKATASEKTGLAKLLKVLEEGKPVRTV--ELTEEEAKDTAYLGLLTAKKVIYACNVADSDLADGNAMVDGVRKFAEEEGARVVIVSAQVESELVDLDGEDKQEFLESLGVSEETCGLRALVKEAYTALGLQTYFTSGETETKAWTIYAGWTAPKAAGVIHSDFERGFIRAEAIKYEDLVNCGSEKAAKEKGLLRSEGKEYVVQEGDVLHFRFNV 413          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: OJU63113.1 (redox-regulated ATPase YchF [Armatimonadetes bacterium 55-13])

HSP 1 Score: 478.8 bits (1231), Expect = 1.800e-131
Identity = 248/366 (67.76%), Postives = 300/366 (81.97%), Query Frame = 0
Query:   83 LKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKD---KTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            L+AG VGLPNVGKSTLFNA+   + AQAANFPFCTIEPNVG+  VPD RL  LA I+ SE++LPA LE VDIAGLVKGAS+GEGLGN+FLANIRE DAI+ V+RCFE+DD+IHV+GSVDPERD+EIIN+ELAL+D++Q E+RL RA KD   K   Q E D L+KV  AL DGKPAR +  +L+EDE   +  LGLLT   VIYAANV + +LATGN +VEKV+ +A  +GA V+++SAQVESEL+EL  EDR EFL+SLGV+E   GL++L++ TY +LGLQTYFT GPKETRAWTI KG TAPQAAGVIHSDFE+GFIRAET+S++DLVA G+  A KD G++RSEGK+Y+ +EGDVMLFRFNV
Sbjct:    2 LRAGNVGLPNVGKSTLFNAVVANSKAQAANFPFCTIEPNVGMVSVPDDRLEVLAKISGSEAILPARLEIVDIAGLVKGASKGEGLGNQFLANIREVDAIIHVVRCFENDDIIHVAGSVDPERDIEIINIELALADMAQAERRLDRARKDLRTKKEVQTEIDALEKVVPALQDGKPARTV--SLTEDEAIAIKGLGLLTLKPVIYAANVSEDDLATGNPFVEKVKAIAAAEGAQVIVISAQVESELIELSEEDRAEFLDSLGVKEG--GLQSLIRATYDILGLQTYFTTGPKETRAWTIVKGMTAPQAAGVIHSDFERGFIRAETVSYKDLVAAGNMNAAKDKGQVRSEGKEYIVQEGDVMLFRFNV 363          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: XP_002181298.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47221.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 478.0 bits (1229), Expect = 3.200e-131
Identity = 240/365 (65.75%), Postives = 298/365 (81.64%), Query Frame = 0
Query:   81 MKLKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKDKTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            MKL+  IVGLPNVGKSTLFNALT    A+AAN+PFCTIEPNVGI  VPDP+L  L  I KS  V+PA LEFVD+AGL+KGAS GEGLGN+FLA+IR+CDA+V V+RCFED+DV+HV GS+DP RD E+INLELAL+DLSQVEKRL+R  KD+  +  E+  L+KV   L   +PAR+++  L E+E   +  LGLLT  K++YAANVGD++LA GN+ V+++RE AE++GA +V+VSAQVE+ELVEL + DR +FLESLGV+ E  GLR LV+E Y +LGLQTY+T GP ETRAWTI+KG TAP+AAGVIH+DFE+GFIRAET+S++DLVA GSE   K+ GKLRSEGKDY+ +EGDV+LFRFNV
Sbjct:    1 MKLQTAIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVSVPDPKLEILKDINKSVKVVPAALEFVDVAGLIKGASTGEGLGNQFLASIRQCDAVVHVVRCFEDEDVVHVDGSIDPVRDAELINLELALADLSQVEKRLERVRKDRNASPVEKSALEKVAAVLLKDQPARNVV--LDEEEENAIKSLGLLTAKKMVYAANVGDADLANGNEMVDRLRETAEKEGAKLVVVSAQVEAELVELSVGDRTDFLESLGVKLEDTGLRKLVREAYDILGLQTYYTSGPTETRAWTIRKGWTAPKAAGVIHNDFERGFIRAETVSYDDLVACGSEIEAKNKGKLRSEGKDYIVQEGDVILFRFNV 363          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: WP_039725995.1 (redox-regulated ATPase YchF [Lyngbya confervoides] >KIF14272.1 GTP-binding protein [Aphanocapsa montana BDHKU210001] >KIF39206.1 GTP-binding protein [Lyngbya confervoides BDU141951])

HSP 1 Score: 468.8 bits (1205), Expect = 1.900e-128
Identity = 248/367 (67.57%), Postives = 296/367 (80.65%), Query Frame = 0
Query:   83 LKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQR----ALKDKTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            L+AGIVGLPNVGKSTLFNA+   A AQAANFPFCTIEPNVG+  VPDPRL  LA I++S  ++PA +EFVDIAGLV+GAS+GEGLGN+FLANIRE DAIV V+RCF++DD+IHVSGS+DP RD EIINLEL LSDL+QVEKRL+R    A KDK + Q E D L K+   L +GK AR +  T  E+ L  +  LGLLT   VIYA NV + +LATGN YVE+V+ +A  +GA VV++SAQVESEL+ELP EDR +FLESLGV+E   GL++L++ TY LLGLQTYFT GPKETRAWTIK G +APQAAGVIH+DFE+GFIRAET+S++DLV  GS   VK+ G+LRSEGKDYV +EGDVMLFRFNV
Sbjct:    2 LRAGIVGLPNVGKSTLFNAVVANAKAQAANFPFCTIEPNVGVVAVPDPRLEVLAKISESAEIVPARVEFVDIAGLVEGASKGEGLGNQFLANIREVDAIVHVVRCFQNDDIIHVSGSIDPARDAEIINLELTLSDLAQVEKRLERARKQAKKDKEI-QAEVDVLDKLLPVLNEGKTARTVDLTPEEELL--IKPLGLLTRKPVIYATNVNEDDLATGNDYVEQVKAIAAAEGAEVVVISAQVESELIELPEEDRADFLESLGVEEG--GLQSLIRATYELLGLQTYFTTGPKETRAWTIKAGMSAPQAAGVIHTDFERGFIRAETVSYQDLVDAGSMNGVKEKGQLRSEGKDYVVQEGDVMLFRFNV 363          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: OUC12170.1 (redox-regulated ATPase YchF [Alkalinema sp. CACIAM 70d])

HSP 1 Score: 468.4 bits (1204), Expect = 2.500e-128
Identity = 244/366 (66.67%), Postives = 294/366 (80.33%), Query Frame = 0
Query:   83 LKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKD---KTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            L+AGIVGLPNVGKSTLFNA+ G A AQAANFPFCTIEPNVGI  VPDPRL  LA I+ S  ++PA +EFVDIAGLVKGASQGEGLGN+FLANIRE DAIV V+RCFE+DD+IHVSGSVDP RD+++INLEL L+DL+Q EKR++RA KD   K   Q E D L K+  AL  GK AR +   L+E+E   +  +G LT   VIYA NV + +LATGN +V+KVR +A  +GA VV++SAQVESEL+ELP E+R EFLESLGV E   GL++L++ TY+LLGLQTYFT GPKETRAWTI+KG  APQAAGVIH+DFE+GFIRAET++++DLV  G+  A K+ G +RSEGK+YV +EGDVMLFRFNV
Sbjct:    2 LRAGIVGLPNVGKSTLFNAIVGNAKAQAANFPFCTIEPNVGIVAVPDPRLNVLAKISGSSEIVPARVEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFENDDIIHVSGSVDPLRDVDVINLELGLADLAQAEKRIERARKDARTKKEIQVEVDALDKIIAALNAGKSARSV--ELNEEEELAIKAMGFLTRKPVIYATNVSEDDLATGNAFVDKVRAIAADEGAQVVVISAQVESELIELPEEERAEFLESLGVTEG--GLQSLIRATYNLLGLQTYFTTGPKETRAWTIRKGMVAPQAAGVIHTDFERGFIRAETVAYQDLVDCGAMNAAKEKGLVRSEGKEYVVQEGDVMLFRFNV 363          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: WP_025227177.1 (redox-regulated ATPase YchF [Fimbriimonas ginsengisoli] >AIE84177.1 GTP-dependent nucleic acid-binding protein EngD [Fimbriimonas ginsengisoli Gsoil 348])

HSP 1 Score: 466.1 bits (1198), Expect = 1.200e-127
Identity = 247/366 (67.49%), Postives = 287/366 (78.42%), Query Frame = 0
Query:   83 LKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRA---LKDKTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            L+AG VGLPNVGKSTLFNA+   A AQAANFPFCTIEPNVG+  VPD RL  LAGI  S   +PA LEFVDIAGLVKGASQGEGLGN+FLANIRE DAIV V+RCFEDDD+IHV+GSVDPERD+EIIN+ELAL+D+SQ E+RL +A   L+ K   Q E D L+K+   L +G PAR  L  L++DE   +  LGLLT   VIYAANV + +LA GN YVEKVR +A  +GA VV++SAQVESEL ELP  DR EFLESLG +E   GL +L++ TY LLGLQTYFT GPKETRAWTI KG TAPQAAGVIHSDFE+GFIRAET+++ +LV  GS  A K+ G + SEG+DYV +EGDVMLFRFNV
Sbjct:    2 LRAGNVGLPNVGKSTLFNAVVANAKAQAANFPFCTIEPNVGVVAVPDNRLNVLAGITGSIDTIPARLEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFEDDDIIHVAGSVDPERDIEIINIELALADMSQAERRLDKARKELRTKKEAQVEVDALEKIVPMLQEGLPAR--LANLTDDERFSIRSLGLLTLKPVIYAANVSEDDLAEGNAYVEKVRAIAAHEGAQVVVISAQVESELAELPESDRAEFLESLGAKEG--GLASLIRATYDLLGLQTYFTTGPKETRAWTITKGMTAPQAAGVIHSDFERGFIRAETVAYTNLVQSGSMAAAKEKGLVGSEGRDYVVREGDVMLFRFNV 363          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: WP_106370674.1 (redox-regulated ATPase YchF [Chlorogloea sp. CCALA 695] >PSB28989.1 redox-regulated ATPase YchF [Chlorogloea sp. CCALA 695])

HSP 1 Score: 465.3 bits (1196), Expect = 2.100e-127
Identity = 245/366 (66.94%), Postives = 292/366 (79.78%), Query Frame = 0
Query:   83 LKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKDKTV---TQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            LKAGIVGLPNVGKSTLFNAL   A A+AANFPFCTIEPNVGIA VPD RL  LA I+KSE ++P  +EFVDIAGLVKGASQ EGLGNKFL++IRE DAIV V+RCF++DD+IHVSGSVDP RD+EIINLEL L+DL Q+E++  R  K        Q E   L+K+  AL +GKPAR +   L+E+ELA +  LGLLT   +IYAANV + ELATGNK+VEKVR +A ++ A VVIVSAQVE+ELVELP EDR +FL SLGV+E   GL++L++ TY LLGL+TYFT GPKETRAWTI  G  APQAAGVIHSDFE+GFIRAET++++DLVA  S  A K+ G +RSEGK+YV +EGDV+LFRFNV
Sbjct:    2 LKAGIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGIASVPDERLQVLADISKSEQIVPTRIEFVDIAGLVKGASQNEGLGNKFLSHIREVDAIVHVVRCFDNDDIIHVSGSVDPARDIEIINLELGLADLDQIERKCDRTRKQARANKDAQAEVLVLEKLIAALNEGKPARQV--NLTEEELAVIKDLGLLTNKPIIYAANVSEEELATGNKWVEKVRAIAAQENAQVVIVSAQVEAELVELPAEDRADFLASLGVEEG--GLKSLIRATYELLGLRTYFTAGPKETRAWTINAGMVAPQAAGVIHSDFERGFIRAETVAYKDLVATKSMVAAKEKGLVRSEGKEYVVQEGDVLLFRFNV 363          
BLAST of NO23G01910 vs. NCBI_GenBank
Match: WP_009769304.1 (redox-regulated ATPase YchF [Oscillatoriales cyanobacterium JSC-12] >EKQ67049.1 GTP-binding protein YchF [Oscillatoriales cyanobacterium JSC-12])

HSP 1 Score: 464.2 bits (1193), Expect = 4.700e-127
Identity = 244/366 (66.67%), Postives = 291/366 (79.51%), Query Frame = 0
Query:   83 LKAGIVGLPNVGKSTLFNALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLEFVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSVDPERDMEIINLELALSDLSQVEKRLQRALKD---KTVTQPERDGLQKVYDALADGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVEKVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRALVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIRAETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV 446
            L+AGIVGLPNVGKSTLFNAL   A A AANFPFCTIEPNVG+  VPD RL  LA I+ S  ++PA +EFVDIAGLVKGASQGEGLGN+FLANIRE DAIV V+RCFE+DD+IHV+GSV+P RD+E+INLELAL+DL QVEKRL RA K        Q E D L+K+   L +GKPAR +   L+E+E   V  LG+LT   +IYAANV + +LATGN +VE+VRE+A ++ A VV+VSAQVESEL+ELP E+R +FLESLGV E   GL++L++ TY LLGL+TYFT GPKETRAWTI  G  APQAAGVIH+DFE+GFIRAET+++ DLVA GS  A K+ G +RSEGKDYV +EGDVMLFRFNV
Sbjct:    2 LRAGIVGLPNVGKSTLFNALVANAKATAANFPFCTIEPNVGVVAVPDERLSVLAKISNSAEIIPARVEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFENDDIIHVAGSVEPIRDIEVINLELALADLGQVEKRLDRAKKQARGNKELQLEVDALEKLLAVLNEGKPARQV--NLTEEEEMAVKALGMLTRKPIIYAANVSEDDLATGNHWVEQVRELAAQENAQVVVVSAQVESELIELPAEERADFLESLGVSEG--GLQSLIRATYELLGLRTYFTTGPKETRAWTIHAGMVAPQAAGVIHTDFERGFIRAETVAYNDLVAAGSMNAAKEKGLVRSEGKDYVVQEGDVMLFRFNV 363          
The following BLAST results are available for this feature:
BLAST of NO23G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27850.12.100e-19687.07gtp-binding protein [Nannochloropsis gaditana][more]
XP_005854045.15.500e-15275.06gtp-binding protein [Nannochloropsis gaditana CCMP... [more]
CBJ27603.11.300e-13264.05PYchF, plastid YchF-like GTPase [Ectocarpus silicu... [more]
OJU63113.11.800e-13167.76redox-regulated ATPase YchF [Armatimonadetes bacte... [more]
XP_002181298.13.200e-13165.75predicted protein [Phaeodactylum tricornutum CCAP ... [more]
WP_039725995.11.900e-12867.57redox-regulated ATPase YchF [Lyngbya confervoides]... [more]
OUC12170.12.500e-12866.67redox-regulated ATPase YchF [Alkalinema sp. CACIAM... [more]
WP_025227177.11.200e-12767.49redox-regulated ATPase YchF [Fimbriimonas ginsengi... [more]
WP_106370674.12.100e-12766.94redox-regulated ATPase YchF [Chlorogloea sp. CCALA... [more]
WP_009769304.14.700e-12766.67redox-regulated ATPase YchF [Oscillatoriales cyano... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL035nonsL035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR126ngnoR126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007516NSK007516Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01910.1NO23G01910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G01910.2NO23G01910.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100318g1gene2716Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01910.1NO23G01910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G01910.2NO23G01910.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01910 ID=NO23G01910|Name=NO23G01910|organism=Nannochloropsis oceanica|type=gene|length=3600bp
GTACAATCTCTGTTAGGGTTAACCACGAGCCAAACGAATAAGCACATGAT
ACCGCGTGCTCGATAATTAGTTTCACGGTGTAGATTCAGTGCAAAGGCCG
ATTTTTTGTGAGATAAAGCAGCGAGACTCCACTCCATATCCTGGCTCAGC
ACGTCCGTACGTTGCCATCGCACAAGCAACAAGCCCCTCCTTCACCCACC
ACATCTTCACCTGAACACTACCCAAACAGGCATTAAGCAGAAAATACAAG
GGGAAGAAGAGCGCAATTGCTTGCCTTTTTCTTTCGTACCGGCCTGTCCA
GTCTCCATATGTCTTCGACGCCCGCCGCTCGTCGACTCAGCCTCCTGCCC
CTCATCTGCTGCATAACCACGACGGCCACGACCGTACTTGCCGCGCCTTC
CTCATCCTCTACCTgtaagtggcattagacaaagaaatgacaaagtgatg
gcagggcataacttgacatcctctctaggcccctagagaccactacttac
atcccttactgtctccctccctcctcccccccccccccaccccccttacc
ctcccgtagCCACCACCGCCCCCATGATCCTCCTCCGTCATAGCACGACT
GCCATCGGCAGCGCTTTTATCAGACCCTCTACCGCGCCTTGGCTGGCGGG
AACCCGGCGTCGTTTCGCTGCAGgtaggcgcaataagggagggagagatg
ggtggggaggaaatagatagtaagagaccacgaaggcaaaatgaaatgag
gcaggggagaaatagaggataggaagaatgcttatatgcatataagaacg
gccccttgtactactgccactccactcaatcaatggaatgggagcgttaa
aggaaaccaatcaaagagcccagaggaatcgatatctcatcgactggacg
tgaaggagggctgcacacgcactacaccctgtcggaatggtaaaatgcct
ttccttgcgtctgtagtcgtgctgcgaggagggggtaaaacaaagatagc
tccctcctggcgccgctccctgtggtcctaacatcatattgatcattttc
ccgatttagctctttttgtggttgtgtgcatcttcggagctaaagctcac
cctcctcctcctcgccctccctcccacttttttccccttacaaagGTGCT
GGCCACCAAGTGACCATGAAGCTAAAAGCCGGCATCGTAGGCCTACCGAA
CGTGGGCAAGTCCACCCTCTTCAACGCCCTGACGGGCGGCGCCACCGCGC
AGGCAGCGAAgtacgtccattcacgctccaagggagggaaggagaaaggg
agggagggagggagggagggagggaggaggagtggggagtttgatgactc
atgcatttgcttgcactcctctgtgacttgacagCTTCCCTTTTTGCACC
ATCGAGCCGAACGTGGGCATCGCCGAGgtaagaggatctgaagaggaagg
aaacaaaggtgataaaatgttgtaaagaagagaggtgggtaccttagttt
tatctctctactgatctcgcctcatctccctccccttctctctccctccc
tcttcccaagGTGCCCGATCCCCGCCTCCTGGCCCTGGCCGGCATCGCCA
AGAGCGAGTCCGTCTTGCCGGCCGTGCTGGAGTTCGTGGACATCGCGGGG
CTGGTAAAGGGAGCCTCTCAAGGCGAGGGGCTGGGCAACAAATTCCTGGC
GAATATTCGCGAATGCGATGCCATCGTCCAGgtagctttcatttccctcc
ctccctccctccctccctccctcccgtttttcctctccttccccatcgat
ggtctttgatatccttcttcggtgttatagcaagcatgcacatttttttc
gctctctgctctctgctccacatcaccgcggcgacttgtgggcattcatc
ctccctccctggtgtccctctcctcgctccccccgcactcagGTCATCCG
CTGCTTCGAGGATGACGATGTCATTCACGTCTCGGGCTCAGTGGACCCGG
AGCGAGACATGGAGATAATTAACCTGGAGCTCGCCCTCTCCGACTTGTCG
CAAGTAGAAAAGgtaaccacgctctctctcacctctcgtcccccccttcc
tcctttcctccctcccttcctcccgatttctctctcgacgcactcggggc
acgacatgaatttagcttgcctcccgcggatggttgcaagtagaacgcac
agaagtcttgtcctctctctccccgtcccccccaccctaccagcagtgat
agcctgccctcacgggcaaggccgtcgcaaaatccgaacgccgcgatccc
cgaaactaataatcccccctacccccttccctccctcccttttcagCGGC
TACAACGCGCTCTCAAAGACAAAACAGTCACCCAACCCGAGCGCGACGGC
CTCCAGAAGGTGTACGATGCCCTGGCAGACGGCAAGCCGGCCAGGGACAT
CCTTCCGACGCTCTCGGAGGACGAGCTAGCGGACGTGGGGCGCCTCGGTC
TGCTCACAGgcaaggaagtggggagggatggagggaaggagggaaggaga
aaaggagggaaagagggagggagggaaggagggagggaaggagggaggga
gggacgggttgggcgtcgcacaaccgaccacgcggcatcgtaagccgcca
cgtcctcaccctccctccccttgcccttgcccttcccagGCATGAAAGTC
ATCTACGCCGCCAACGTGGGTGATAGCGAGCTGGCCACCGGCAATAAATA
TGTGGAAAAAGTGCGCGAGGTCGCTGAGAGAGACGGAGCAGGTGTCGTCA
TCGTCTCTGCGCAGGTGGAGTCGGAGCTGGTCGAGCTGCCCTTGGAGGAT
CGGAAGGAGTTTTTAGAGTCTCTGGGGGTGCAGGAGGAGGCATGCGGCCT
CCGGGCGCTGGTGAAGGAGACCTACTCTCTGCTGGGGCTACAGACATACT
TCACGTGCGGGCCTAAGGAGACCCGGGCGTGGACGATCAAGAAGGGGAGC
ACGGCACCGCAAGgtggggaggaggggtggtggggatgaaagaaggaaag
gatgatgtgtcggtcgcgaaggaggacaaggattaagcgggaggctcatc
aatccagtattcctcactcgtactcgtaccctccctctttccctcctttc
cccaaaatagCCGCGGGCGTCATCCACTCCGACTTTGAAAAAGGCTTTAT
CCGTGCCGAGACGATGTCCTTCGAGGATCTGGTGGCATTGGGAAGCGAGA
AAGCAGTCAAGGACGCGGGCAAGCTCCGATCCGAGGGGAAGGATTATGTG
TGCAAGGAAGGAGACGTCATGCTTTTCCGCTTCAACGTTTGAGAAGGGGC
AGGGAGGGAGGGATGGAAGGAGAGAGGGAGGGAGGGAGGGATACAAAACA
AAAGAACCAAAAATGACGACTGACTTTGTTATTCGATGGTTCTAATAGTC
TCGTCGGGAAGGGAAACAGGTGGTAGCCTCGCTGTTCGTTATGCGCGTGG
TGAGAATGGTGTAGAGGCTTACCAGGAGGGACAAAAGGATCAATAAGTGA
AAGAAGGTAGATGGAAACTAGCCAAGGGACCGCCACTTCCTCTCACAAAA
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protein sequence of NO23G01910.1

>NO23G01910.1-protein ID=NO23G01910.1-protein|Name=NO23G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=446bp
MSSTPAARRLSLLPLICCITTTATTVLAAPSSSSTSTTAPMILLRHSTTA
IGSAFIRPSTAPWLAGTRRRFAAGAGHQVTMKLKAGIVGLPNVGKSTLFN
ALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLE
FVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSV
DPERDMEIINLELALSDLSQVEKRLQRALKDKTVTQPERDGLQKVYDALA
DGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVE
KVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRA
LVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQAAGVIHSDFEKGFIR
AETMSFEDLVALGSEKAVKDAGKLRSEGKDYVCKEGDVMLFRFNV*
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protein sequence of NO23G01910.2

>NO23G01910.2-protein ID=NO23G01910.2-protein|Name=NO23G01910.2|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MSSTPAARRLSLLPLICCITTTATTVLAAPSSSSTSTTAPMILLRHSTTA
IGSAFIRPSTAPWLAGTRRRFAAGAGHQVTMKLKAGIVGLPNVGKSTLFN
ALTGGATAQAANFPFCTIEPNVGIAEVPDPRLLALAGIAKSESVLPAVLE
FVDIAGLVKGASQGEGLGNKFLANIRECDAIVQVIRCFEDDDVIHVSGSV
DPERDMEIINLELALSDLSQVEKRLQRALKDKTVTQPERDGLQKVYDALA
DGKPARDILPTLSEDELADVGRLGLLTGMKVIYAANVGDSELATGNKYVE
KVREVAERDGAGVVIVSAQVESELVELPLEDRKEFLESLGVQEEACGLRA
LVKETYSLLGLQTYFTCGPKETRAWTIKKGSTAPQGGEEGWWG*
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Synonyms
Publications