NO23G01820, NO23G01820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01820 vs. NCBI_GenBank
Match: GAX83094.1 (hypothetical protein CEUSTIGMA_g10520.t1 [Chlamydomonas eustigma]) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-10 Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0 Query: 270 FGRIPSYLLAIKQARLAAEALRRAAMKGRHSD-IPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLIK 374 FGR+P+YLL Q ++ + + M+ R + IPPGMRLL + ER E L L E++ L +PLR++TP R++ LE RL E+ ++FA+P+VL+K Sbjct: 190 FGRVPTYLL---QRKIDLIDQQESEMRAREAALIPPGMRLLPEDERLETLTVLQKNRHEVERALQALPLRIETPGQIRRRDELERRLREIEEGLKVFARPKVLVK 291
BLAST of NO23G01820 vs. NCBI_GenBank
Match: XP_005841047.1 (hypothetical protein GUITHDRAFT_132477 [Guillardia theta CCMP2712] >EKX54067.1 hypothetical protein GUITHDRAFT_132477 [Guillardia theta CCMP2712]) HSP 1 Score: 75.9 bits (185), Expect = 3.000e-10 Identity = 40/111 (36.04%), Postives = 67/111 (60.36%), Query Frame = 0 Query: 266 RHKAFGRIPSYLLAIKQARLAAEALRRAAMKGRH---SDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLIK 374 +H+++G++PSY++ K+ L R +K H D PPGMRL+ D +R LA LD + ++ L +P +DTPS+ R+K +LE +L EV + +L+++ RV +K Sbjct: 180 KHESYGKVPSYIIKRKEEMLRK---REETIKHMHEFPDDCPPGMRLMKDEDRKAVLAQLDEHKLKLLRALADLPCIIDTPSLDRQKTSLETKLNEVDKAIKLYSRQRVFVK 287
BLAST of NO23G01820 vs. NCBI_GenBank
Match: XP_001702304.1 (flagellar/basal body protein [Chlamydomonas reinhardtii]) HSP 1 Score: 75.5 bits (184), Expect = 4.000e-10 Identity = 41/105 (39.05%), Postives = 67/105 (63.81%), Query Frame = 0 Query: 268 KAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 K +G++P YLL ++ ++AAE +A K + IPPGMRL+ + ER E L L E+ + ++PLR++TPS R+K LE RL E+ + ++F++P+VL+ Sbjct: 109 KDYGQVPQYLLE-RKMQMAAEVEAQARAK-EAALIPPGMRLMPEDERLETLEVLKKNREEVDRAIQQLPLRIETPSAIRRKEDLERRLREIEDAIKIFSRPKVLV 211
BLAST of NO23G01820 vs. NCBI_GenBank
Match: PNW79608.1 (hypothetical protein CHLRE_08g359850v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 75.5 bits (184), Expect = 4.000e-10 Identity = 41/105 (39.05%), Postives = 67/105 (63.81%), Query Frame = 0 Query: 268 KAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 K +G++P YLL ++ ++AAE +A K + IPPGMRL+ + ER E L L E+ + ++PLR++TPS R+K LE RL E+ + ++F++P+VL+ Sbjct: 198 KDYGQVPQYLLE-RKMQMAAEVEAQARAK-EAALIPPGMRLMPEDERLETLEVLKKNREEVDRAIQQLPLRIETPSAIRRKEDLERRLREIEDAIKIFSRPKVLV 300
BLAST of NO23G01820 vs. NCBI_GenBank
Match: KXZ51626.1 (hypothetical protein GPECTOR_12g590 [Gonium pectorale]) HSP 1 Score: 74.7 bits (182), Expect = 6.800e-10 Identity = 40/105 (38.10%), Postives = 66/105 (62.86%), Query Frame = 0 Query: 268 KAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 K +G++P YLL ++ ++AA+ + AA + IPPGMRL+ + ER E L L E+ + +PLR++TPS R+K LE RL E+ + ++F++P+VL+ Sbjct: 106 KDYGQVPQYLLE-RKMQMAAD-VEAAARAKEAALIPPGMRLMPEEERQETLEVLKQNREEVDRAIQGLPLRIETPSAIRRKDELERRLREIEDAIKIFSRPKVLV 208
BLAST of NO23G01820 vs. NCBI_GenBank
Match: PNH09884.1 (hypothetical protein TSOC_003443 [Tetrabaena socialis]) HSP 1 Score: 74.7 bits (182), Expect = 6.800e-10 Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = 0 Query: 268 KAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 K +G++PSYLL ++ ++AA+ + AA + IPPGMRLL + ER E L L + EI+ + +PLR +T S R+K LE RL E+ ++++FA+P+VL+ Sbjct: 109 KDYGQVPSYLLE-RKLQMAAD-VEAAARAKEAALIPPGMRLLPEEERLETLEILKKNKDEIERAIQGLPLRTETLSAIRRKEELERRLREIEDAQKIFARPKVLV 211
BLAST of NO23G01820 vs. NCBI_GenBank
Match: GAX99790.1 (Hypothetical protein PINS_007655 [Pythium insidiosum]) HSP 1 Score: 74.3 bits (181), Expect = 8.900e-10 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0 Query: 265 ARHKAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 ARH +FGR+P YLL ++ E RR + PPGM L +AER + L L E + + +PLR++TPS R+K+ LEARL E+ + ++F+KP V + Sbjct: 144 ARHPSFGRVPMYLLXRREXWAKEEEERR--RNAPDPECPPGMVRLDEAERLKTLDVLHRSFGEARQQMNALPLRIETPSQVRRKNELEARLQEIEDAIKVFSKPXVFV 249
BLAST of NO23G01820 vs. NCBI_GenBank
Match: XP_008608122.1 (hypothetical protein SDRG_04236 [Saprolegnia diclina VS20] >EQC38530.1 hypothetical protein SDRG_04236 [Saprolegnia diclina VS20]) HSP 1 Score: 73.2 bits (178), Expect = 2.000e-9 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 0 Query: 266 RHKAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 RH++FG++PSYL K A E RR M D PPGM L+ D +R + LA L + + ++PLR++TPS R+K ALE ++ E+ + ++F KP+V + Sbjct: 178 RHQSFGQVPSYLRERKAAWAKEEEDRR--MNLPDPDCPPGMVLMPDDDRLDTLATLRESYEAARRQMNQLPLRIETPSQIRRKQALETKMQEIEDAIKVFDKPKVFM 282
BLAST of NO23G01820 vs. NCBI_GenBank
Match: XP_012201962.1 (hypothetical protein SPRG_07433 [Saprolegnia parasitica CBS 223.65] >KDO27184.1 hypothetical protein SPRG_07433 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 69.7 bits (169), Expect = 2.200e-8 Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 0 Query: 266 RHKAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 RH +FG++PSYL K A E RR M D P GM L+ D +R + LA L + + ++PLR++TPS R+K ALE ++ E+ + ++F KP+V + Sbjct: 171 RHHSFGQVPSYLRERKAAWAKEEEERR--MNLPDPDCPHGMVLMADDDRLDTLATLRESYEAARRQMNQLPLRIETPSQIRRKQALETKMQEIEDAIKVFDKPKVFM 275
BLAST of NO23G01820 vs. NCBI_GenBank
Match: XP_009829395.1 (hypothetical protein H257_06027 [Aphanomyces astaci] >ETV81537.1 hypothetical protein H257_06027 [Aphanomyces astaci]) HSP 1 Score: 67.0 bits (162), Expect = 1.400e-7 Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 266 RHKAFGRIPSYLLAIKQARLAAEALRRAAMKGRHSDIPPGMRLLTDAERSEALAALDAQEREIQSMLLKIPLRVDTPSMARKKHALEARLTEVGTSRELFAKPRVLI 373 RH+ FG +P Y+ A K A E RRA + D PPGM L+ D ER LA L + + L +PLR++T S R+K A+++++ E+ + +F KP+V + Sbjct: 182 RHRNFGEVPGYIRARKAAWAKEEGDRRANLP--DPDCPPGMVLMPDDERVATLATLRETLEQTRRQLQALPLRIETLSQIRRKTAIDSKMQEIEDAIVVFDKPKVFM 286 The following BLAST results are available for this feature:
BLAST of NO23G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 16
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01820 ID=NO23G01820|Name=NO23G01820|organism=Nannochloropsis oceanica|type=gene|length=4191bpback to top protein sequence of NO23G01820.2 >NO23G01820.2-protein ID=NO23G01820.2-protein|Name=NO23G01820.2|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top protein sequence of NO23G01820.1 >NO23G01820.1-protein ID=NO23G01820.1-protein|Name=NO23G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=376bpback to top Synonyms
Publications
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