NO23G01770, NO23G01770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01770 vs. NCBI_GenBank
Match: EWM27770.1 (the actin binding protein cofilin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 258.5 bits (659), Expect = 1.200e-65 Identity = 125/140 (89.29%), Postives = 134/140 (95.71%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDDKIQIEKEGAREKSWKDFTEDLPESDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEEILPSVKRFT 141 M+TGVEAADEVGSSFSQFKLQR PYN+RYIIY IK+DKIQIEK+GARE +W+DF DLPESDCRYAVIDVEFETDDGRPTSKI+FLSWAPDTAKVR KMVYAGSKEAIKRALVGVGIHLNATDRSELEFE+ILP+VKRFT Sbjct: 20 MSTGVEAADEVGSSFSQFKLQRAPYNVRYIIYEIKEDKIQIEKQGARENNWEDFCADLPESDCRYAVIDVEFETDDGRPTSKIIFLSWAPDTAKVRSKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEQILPAVKRFT 159
BLAST of NO23G01770 vs. NCBI_GenBank
Match: EJK69270.1 (hypothetical protein THAOC_09491 [Thalassiosira oceanica]) HSP 1 Score: 198.4 bits (503), Expect = 1.500e-47 Identity = 95/142 (66.90%), Postives = 118/142 (83.10%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDDK-IQIEKEGAREKSWKDFTEDLPESDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEE-ILPSVKRFT 141 M+TGV +DEV +SF++FKL + PY LRY IY IK+ K I I +G R K+++DF E+LPE+DCRY +ID+EFETDDGRPTSKIVF+SW PDTA +RPKM+Y+GSKEA+K ALVGVGIH+NATD SEL+FEE ILP K+FT Sbjct: 1 MSTGVAVSDEVSTSFNKFKLGQEPYKLRYFIYEIKNKKEIVISSQGDRSKTYEDFVEELPENDCRYGLIDIEFETDDGRPTSKIVFISWNPDTASIRPKMLYSGSKEALKSALVGVGIHINATDHSELDFEEAILPVCKKFT 142
BLAST of NO23G01770 vs. NCBI_GenBank
Match: XP_002289969.1 (the actin binding protein cofilin-like protein [Thalassiosira pseudonana CCMP1335] >EED93506.1 the actin binding protein cofilin-like protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 196.1 bits (497), Expect = 7.600e-47 Identity = 95/141 (67.38%), Postives = 116/141 (82.27%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDDK-IQIEKEGAREKSWKDFTEDLPESDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFE-EILPSVKRF 140 MATGV DEV +SF +FKL + PY LRY +Y IK+ K I IEK+G K+++DF E+LPE+DCRY +ID+EFETDDGRPTSK+VF+SW PDTA VRPKM+Y+GSKEA+K ALVGVGIH+NATD SEL+FE ILP VK+F Sbjct: 1 MATGVAVDDEVSASFQKFKLGQEPYKLRYFVYEIKNKKTIVIEKQGELSKTYEDFVEELPENDCRYGLIDIEFETDDGRPTSKLVFISWNPDTASVRPKMLYSGSKEALKSALVGVGIHINATDHSELDFETAILPVVKKF 141
BLAST of NO23G01770 vs. NCBI_GenBank
Match: OQR97197.1 (actin-depolymerizing factor [Thraustotheca clavata]) HSP 1 Score: 168.3 bits (425), Expect = 1.700e-38 Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDDKIQIEKEGAREKSWKDFTEDLPE--SDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEEILPSVKRF 140 M++GV D+V S F+ FKLQR PYN RY IY I+ D+I IE G R +S++DF L E S+CRY +ID++F T DGRPTSK+VF+SW+PDT+K++ KMVYA SKEAIKR LVGVGI+L+ATD SEL F I V +F Sbjct: 1 MSSGVGVHDDVISEFNDFKLQRAPYNFRYFIYKIEHDEIVIEHRGERSESYEDFANKLLEIQSECRYGLIDLDFTTKDGRPTSKLVFISWSPDTSKIKSKMVYASSKEAIKRCLVGVGIYLSATDASELAFSAIEDGVSKF 141
BLAST of NO23G01770 vs. NCBI_GenBank
Match: XP_012205098.1 (hypothetical protein SPRG_10581 [Saprolegnia parasitica CBS 223.65] >KDO24154.1 hypothetical protein SPRG_10581 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 158.7 bits (400), Expect = 1.300e-35 Identity = 78/142 (54.93%), Postives = 104/142 (73.24%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIK-DDKIQIEKEGAREKSWKDFTEDL--PESDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEEILPSVKRF 140 M++GV +D+V + F+ FKLQ+ PYN RY IY I+ D +I IE G R +++ DF L ++CRY +ID++F T DGRPTSK+VF+SW+PDTA+V+ KM+YA SKEAIKR LVGVGI+L+ATD SEL F I V +F Sbjct: 1 MSSGVGVSDDVVTEFNDFKLQKAPYNFRYFIYKIEGDSEIVIEHRGERSETYDDFAAKLNATTNECRYGLIDLDFTTKDGRPTSKLVFISWSPDTARVKSKMLYASSKEAIKRGLVGVGIYLSATDASELSFSSIQDGVSKF 142
BLAST of NO23G01770 vs. NCBI_GenBank
Match: OEU18465.1 (actin depolymerazing factor [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 158.3 bits (399), Expect = 1.700e-35 Identity = 78/141 (55.32%), Postives = 105/141 (74.47%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDDK-IQIEKEGAREKSWKDFTEDLPESDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEE-ILPSVKRF 140 M++GV DE+G F FKLQ+ P +RY +Y I++ K I I G R ++ DF +DLPE++ RY +ID++FET DGRPTSK+VF+SW PDTA VR KM+Y+ SKE+IK AL GVGIH+NATD +EL+ ++ ILP VK+F Sbjct: 1 MSSGVAVEDEIGEKFQDFKLQKSP--IRYYVYKIENKKTIVIASSGERSATYADFVKDLPENEPRYGLIDLDFETKDGRPTSKLVFISWVPDTASVREKMLYSSSKESIKAALNGVGIHINATDSAELDLDDSILPVVKKF 139
BLAST of NO23G01770 vs. NCBI_GenBank
Match: GAX11768.1 (cofilin [Fistulifera solaris]) HSP 1 Score: 158.3 bits (399), Expect = 1.700e-35 Identity = 80/141 (56.74%), Postives = 105/141 (74.47%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDDK-IQIEKEGAREKSWKDFTEDLPESDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFE-EILPSVKRF 140 M+TGV ADEV S+F+ FKL + L+YIIY I+D K I EK G + K++ DF DLP+ DCRY +ID++F TDDGRPTSK+V ++W PD+ +R KM+Y+GSKEA+K AL GVGIH+NATD SEL+ E ILP ++F Sbjct: 1 MSTGVVVADEVTSTFNAFKLGQGE-KLKYIIYKIEDKKTIVTEKTGEKGKTYDDFCADLPDDDCRYGLIDLDFTTDDGRPTSKLVLITWNPDSGSIRNKMLYSGSKEALKTALNGVGIHINATDHSELDLEASILPICRKF 140
BLAST of NO23G01770 vs. NCBI_GenBank
Match: GAX20835.1 (cofilin [Fistulifera solaris]) HSP 1 Score: 157.9 bits (398), Expect = 2.300e-35 Identity = 79/141 (56.03%), Postives = 105/141 (74.47%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDDK-IQIEKEGAREKSWKDFTEDLPESDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFE-EILPSVKRF 140 M+TGV ADEV S+F+ FKL + L+YIIY I+D K I EK G + K++ DF DLP+ DCRY +ID++F TDDGRPTSK+V ++W PD+ +R KM+Y+GSKEA+K AL GVGIH+NATD SEL+ E +LP ++F Sbjct: 1 MSTGVVVADEVTSTFNAFKLGQGE-KLKYIIYKIEDKKTIVTEKTGEKGKTYDDFCADLPDDDCRYGLIDLDFTTDDGRPTSKLVLITWNPDSGSIRNKMLYSGSKEALKTALNGVGIHINATDHSELDLEASVLPICRKF 140
BLAST of NO23G01770 vs. NCBI_GenBank
Match: XP_008907920.1 (hypothetical protein PPTG_12927 [Phytophthora parasitica INRA-310] >ETI43300.1 hypothetical protein F443_11729 [Phytophthora parasitica P1569] >ETK83368.1 hypothetical protein L915_11419 [Phytophthora parasitica] >ETL36766.1 hypothetical protein L916_11324 [Phytophthora parasitica] >ETL89960.1 hypothetical protein L917_11216 [Phytophthora parasitica] >ETM43254.1 hypothetical protein L914_11262 [Phytophthora parasitica] >ETN06952.1 hypothetical protein PPTG_12927 [Phytophthora parasitica INRA-310] >ETO71951.1 hypothetical protein F444_11813 [Phytophthora parasitica P1976] >ETP13083.1 hypothetical protein F441_11663 [Phytophthora parasitica CJ01A1] >ETP41172.1 hypothetical protein F442_11631 [Phytophthora parasitica P10297] >KUF94281.1 Actin-depolymerizing factor [Phytophthora nicotianae]) HSP 1 Score: 157.1 bits (396), Expect = 3.900e-35 Identity = 78/142 (54.93%), Postives = 104/142 (73.24%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDD-KIQIEKEGAREKSWKDFTEDLPE--SDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEEILPSVKRF 140 M++GV DEV + F+ FKL+R P++ RY IY I+DD +I IE G +S++D + L + +DCRYA++D++ T DGRPTSKIVFLSW+PDTA+++ KM+YA SKEAIKR L+GVGIHL ATD SEL E I V +F Sbjct: 1 MSSGVGVDDEVITQFNDFKLKRAPHDFRYFIYKIEDDSQIVIESTGPSSESYQDMADKLAQITNDCRYALVDLDLTTKDGRPTSKIVFLSWSPDTARIKSKMLYASSKEAIKRVLMGVGIHLTATDASELSLESIEDGVAKF 142
BLAST of NO23G01770 vs. NCBI_GenBank
Match: XP_024573950.1 (the actin binding protein cofilin-like protein [Plasmopara halstedii] >CEG37581.1 the actin binding protein cofilin-like protein [Plasmopara halstedii]) HSP 1 Score: 156.8 bits (395), Expect = 5.100e-35 Identity = 78/142 (54.93%), Postives = 104/142 (73.24%), Query Frame = 0 Query: 1 MATGVEAADEVGSSFSQFKLQRPPYNLRYIIYVIKDD-KIQIEKEGAREKSWKDFTEDLPE--SDCRYAVIDVEFETDDGRPTSKIVFLSWAPDTAKVRPKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEEILPSVKRF 140 M++GV DEV + F+ FKL+R P++ RY IY I+DD +I IE G +S++D + L + +DCRYA++D++ T DGRPTSKIVFLSW+PDTA+++ KM+YA SKEAIKR L+GVGIHL ATD SEL E I V +F Sbjct: 1 MSSGVGVDDEVITQFNDFKLKRAPHDYRYFIYKIEDDSQIVIESTGPSSESYQDMADKLAKITNDCRYALVDLDLTTKDGRPTSKIVFLSWSPDTARIKSKMLYASSKEAIKRVLMGVGIHLTATDASELSLESIEDGVSKF 142 The following BLAST results are available for this feature:
BLAST of NO23G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01770 ID=NO23G01770|Name=NO23G01770|organism=Nannochloropsis oceanica|type=gene|length=1051bpback to top protein sequence of NO23G01770.1 >NO23G01770.1-protein ID=NO23G01770.1-protein|Name=NO23G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=141bpback to top Synonyms
Publications
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