NO23G01760, NO23G01760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01760 vs. NCBI_GenBank
Match: POM67352.1 (Dynactin 5 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 162.2 bits (409), Expect = 2.000e-36 Identity = 120/230 (52.17%), Postives = 146/230 (63.48%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR GL L KE +SRHRQV L+D+RP++A + +VAP+ATVVG+VE+ + S++Y VIRGD N V+IGN TNVQD VI T + G +IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K++R L D+EV A Y +A TH +EF P+G AYLDAEK K Sbjct: 1 MMRKVTFELGRCVRETGQALDRLGLRVLNDNSFKEKFSRHRQVMALYDKRPKIAHDVWVAPNATVVGDVEICNDASVFYNVVIRGDLNQVRIGNRTNVQDRTVIHTASSTSPGLAPGANIGNDVTIGHGCTLYSCTIENNALIGMGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYVRDLSDDEVTDITKQASEYKNIASTHSDEFLPYGTAYLDAEKIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: POM69595.1 (Dynactin 5 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 162.2 bits (409), Expect = 2.000e-36 Identity = 120/230 (52.17%), Postives = 146/230 (63.48%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR GL L KE +SRHRQV L+D+RP++A + +VAP+ATVVG+VE+ + S++Y VIRGD N V+IGN TNVQD VI T + G +IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K++R L D+EV A Y +A TH +EF P+G AYLDAEK K Sbjct: 1 MMRKVTFELGRCVRETGQALDRLGLRVLNDNSFKEKFSRHRQVMALYDKRPKIAHDVWVAPNATVVGDVEICNDASVFYNVVIRGDLNQVRIGNRTNVQDRTVIHTASSTSPGLAPGANIGNDVTIGHGCTLYSCTIENNALIGMGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYVRDLSDDEVADITKQASEYKNIASTHSDEFLPYGTAYLDAEKIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: OWZ00546.1 (hypothetical protein PHMEG_00028233 [Phytophthora megakarya]) HSP 1 Score: 161.8 bits (408), Expect = 2.700e-36 Identity = 119/230 (51.74%), Postives = 146/230 (63.48%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR GL L KE +SRHRQV L+D+RP++A + +VAP+AT+VG+VE+ + S++Y VIRGD N V+IGN TNVQD VI T + G +IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K++R L D+EV A Y +A TH +EF P+G AYLDAEK K Sbjct: 1 MMRKVTFELGRCVRETGQALDRLGLRVLNDNSFKEKFSRHRQVMALYDKRPKIAHDVWVAPNATIVGDVEICNDASVFYNVVIRGDLNQVRIGNRTNVQDRTVIHTASSTSPGLAPGANIGNDVTIGHGCTLYSCTIENNALIGMGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYVRDLSDDEVADIAKQASEYKNIASTHSDEFLPYGTAYLDAEKIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_008608997.1 (hypothetical protein SDRG_05080 [Saprolegnia diclina VS20] >EQC37477.1 hypothetical protein SDRG_05080 [Saprolegnia diclina VS20]) HSP 1 Score: 159.8 bits (403), Expect = 1.000e-35 Identity = 123/231 (53.25%), Postives = 159/231 (68.83%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAKL 235 M+RK LG+ +RETGQA+DR GL LG+ + +E +SRHRQ+ NL+D+ P VA +++VAP+A+V+G+VE+ + S+WYG VIRGD N V IGN TN+QD VI T T G IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW G+P +++R + ++E+ A+ Y LA TH +EF P+G AYLDAE+ K+ Sbjct: 1 MLRKVTFELGRCVRETGQAMDRLGLRVLGSNEAREKFSRHRQIMNLYDKVPSVAYDSWVAPNASVIGDVEICNDASVWYGVVIRGDLNKVSIGNRTNIQDRTVIHTSSTTTPGLAPGASIGNDVTVGHGCILYSCTIENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGSPAQYVRDVTEDEIADLTNQAKEYKKLADTHSDEFLPYGTAYLDAERIKV 231
BLAST of NO23G01760 vs. NCBI_GenBank
Match: OQR84644.1 (hypothetical protein ACHHYP_13114 [Achlya hypogyna]) HSP 1 Score: 159.5 bits (402), Expect = 1.300e-35 Identity = 124/230 (53.91%), Postives = 157/230 (68.26%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQA+DR GL LG+ + +E +SRHRQ+ NL+D+ P VA +++VAPSA+V+G+VE+ + S+WYG VIRGD N V IGN TN+QD VI T T G IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW G+P +++R + ++E+ A Y LA TH +EF P+G AYLDAE+ K Sbjct: 1 MLRKVTFELGRCVRETGQAMDRLGLRVLGSNEAREKFSRHRQIMNLYDKVPNVAFDSWVAPSASVIGDVEICNDASVWYGVVIRGDLNKVSIGNRTNIQDRTVIHTSSTTTPGLAPGASIGNDVTVGHGCILYSCTIENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGSPAQYVRDVTEDEIADLTKQAAEYKNLAATHSDEFLPYGTAYLDAERIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_012207200.1 (hypothetical protein SPRG_12043 [Saprolegnia parasitica CBS 223.65] >KDO22056.1 hypothetical protein SPRG_12043 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 159.1 bits (401), Expect = 1.700e-35 Identity = 123/230 (53.48%), Postives = 158/230 (68.70%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQA+DR GL LG+ + +E +SRHRQ+ NL+D+ P VA +++VAP+A+V+G+VE+ + S+WYG VIRGD N V IGN TN+QD VI T T G IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW G+P +++R + ++E+ A+ Y LA TH +EF P+G AYLDAE+ K Sbjct: 1 MLRKVTFELGRCVRETGQAMDRLGLRVLGSNEAREKFSRHRQIMNLYDKVPSVAYDSWVAPNASVIGDVEICNDASVWYGVVIRGDLNKVSIGNRTNIQDRTVIHTSSTTTPGLAPGASIGNDVTVGHGCILYSCTIENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGSPAQYVRDVTEDEIADLTNQAKEYKKLADTHSDEFLPYGTAYLDAERIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_024584647.1 (Trimeric LpxA-like [Plasmopara halstedii] >CEG48278.1 Trimeric LpxA-like [Plasmopara halstedii]) HSP 1 Score: 159.1 bits (401), Expect = 1.700e-35 Identity = 114/230 (49.57%), Postives = 142/230 (61.74%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR GL L KE +SRHRQV L+D+RP++A + +VAP+AT+VG+VE+ + S++Y VIRGD N V+IGN TNVQD VI T + + G +IG+ XXXXXXXXXXXXXXXXXXXXXXXXX W GNP K++R L D+EV A Y +A TH +EF P+G AYLDAEK K Sbjct: 1 MMRKVTFELGRCVRETGQALDRLGLRVLNDNSFKEKFSRHRQVMALYDKRPQIAHDVWVAPNATIVGDVEICNDASVFYNVVIRGDLNQVRIGNRTNVQDRTVIHTASSTNPGLAPGSNIGNDVTIGHGCTLYSCTIENNVLIGMGSIILDGXXXXXXXXXXXXXXXXXXXXXXXXXXWAGNPAKYVRDLSDDEVADITKQASEYKNIASTHSDEFLPYGTAYLDAEKIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_009831264.1 (hypothetical protein H257_07436 [Aphanomyces astaci] >ETV79423.1 hypothetical protein H257_07436 [Aphanomyces astaci]) HSP 1 Score: 157.5 bits (397), Expect = 5.000e-35 Identity = 124/229 (54.15%), Postives = 157/229 (68.56%), Query Frame = 0 Query: 5 IRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 +RK + LG+A+RETGQA+DR GL LG+ H+E +SRHRQ+ L+D+ P +A +++VAP+A+V+G+VE+ + S+WYG VIRGD N V IGN TN+QD AVI T T G IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+P K++R + ++EV V A Y LA TH +EF P+G AYLDAE+ K Sbjct: 1 MRKAIFELGRAVRETGQAVDRLGLRVLGSSLHREKFSRHRQIMALYDKAPVIAHDSWVAPNASVIGDVEICNDSSVWYGVVIRGDLNKVSIGNRTNIQDRAVIHTSSTTTPGLAPGTSIGNNVTVGHGAILYSCTIENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPAKYVRDVSEDEVADLVKQASEYTKLAETHSDEFLPYGTAYLDAERIK 229
BLAST of NO23G01760 vs. NCBI_GenBank
Match: GAQ89113.1 (hypothetical protein KFL_004880080 [Klebsormidium nitens]) HSP 1 Score: 128.6 bits (322), Expect = 2.500e-26 Identity = 98/218 (44.95%), Postives = 125/218 (57.34%), Query Frame = 0 Query: 7 KGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPT------LDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENE 219 + L ++G +RETGQA+DR G GT +KE SRHR + NL ++P V S FVAPSA+V+G+VE+ K SIWYGA++RGD NS+K+G TN+QD +++ T L T +KV IGH XXXXXXXXXXXXXXXXXXXXX +W GNP KF+RKL EE +AE+Y A+ H E Sbjct: 6 RALYSIGFWIRETGQAIDRLGCALQGTNAYKEQLSRHRTLMNLMGKKPHVPSTTFVAPSASVIGDVEVGPKSSIWYGAILRGDVNSIKVGAMTNIQDGSIVHVAKTNISGNVLPTTIGSKVTIGH------NAILHACTVEDESFVGMGSTLLDGXXXXXXXXXXXXXXXXXXXXXPAGEIWAGNPAKFLRKLTAEETAFITKSAESYFESAQVHAEE 217
BLAST of NO23G01760 vs. NCBI_GenBank
Match: KOO29385.1 (hypothetical protein Ctob_001701 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 128.3 bits (321), Expect = 3.300e-26 Identity = 110/223 (49.33%), Postives = 144/223 (64.57%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAY 227 ++R+ + +G+ RETGQAL R G A +E RHR + NLFDQRP+++S FVAP+A+V+G VE+ D S+WYGAVIR D++++ IG +++ D VI + TGF A+ +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++GG+P +IRKL EE+ +AEA ALA H +EF P+G Y Sbjct: 3 LMRRVVVGIGRGFRETGQALQRMGARAQDNWIFQEKICRHRALMNLFDQRPKLSSGVFVAPNASVIGSVEIKDLSSVWYGAVIRADQSTIHIGGFSSIGDRTVIQSAAINPTGFSARTYVGDYVTIGQGCIMRACTVDDNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYGGSPAAYIRKLSKEELAQFQVSAEATAALAAKHADEFLPYGTLY 225 The following BLAST results are available for this feature:
BLAST of NO23G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01760 ID=NO23G01760|Name=NO23G01760|organism=Nannochloropsis oceanica|type=gene|length=1499bpback to top protein sequence of NO23G01760.1 >NO23G01760.1-protein ID=NO23G01760.1-protein|Name=NO23G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=237bpback to top Synonyms
Publications
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