NO23G01760, NO23G01760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01760 vs. NCBI_GenBank
Match: EWM27773.1 (Trimeric LpxA [Nannochloropsis gaditana]) HSP 1 Score: 313.9 bits (803), Expect = 4.200e-82 Identity = 214/236 (90.68%), Postives = 228/236 (96.61%), Query Frame = 0 Query: 1 MSRMIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAKLSE 237 MSR+IRKGLDTLGKALRETGQALDR G+EALG++KHKELWSRHRQVSNLFDQRPRVASNAFV+PSATVVGEV LWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVI TVP+LD+GFPA VDIG++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LWGGNPVKFIRKLEDEEV+ANV AAEAYHALA++HENEF PFGAAYLDAEK K+S+ Sbjct: 28 MSRLIRKGLDTLGKALRETGQALDRTGMEALGSDKHKELWSRHRQVSNLFDQRPRVASNAFVSPSATVVGEVSLWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVICTVPSLDSGFPATVDIGNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELWGGNPVKFIRKLEDEEVLANVAAAEAYHALAQSHENEFLPFGAAYLDAEKVKVSK 263
BLAST of NO23G01760 vs. NCBI_GenBank
Match: GAY03512.1 (Hypothetical protein PINS_011344 [Pythium insidiosum]) HSP 1 Score: 169.9 bits (429), Expect = 9.800e-39 Identity = 125/230 (54.35%), Postives = 150/230 (65.22%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR G+ LG KE +SRHRQV NL+D+RP +A + +VAP+ATVVG+VE+ + SIWY VIRGD N V+IGN TNVQD VI T G PA IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K+IR + ++EV A Y +A+TH +EF P+G AYLDAE+ K Sbjct: 179 MLRKVTFELGRCVRETGQALDRLGMRVLGDNAFKERFSRHRQVMNLYDKRPVIAHDVWVAPNATVVGDVEICNDASIWYNVVIRGDLNQVRIGNRTNVQDRTVIHTASNSTPGLPAGTSIGNDVTIGHGCILYSCTIENNALIGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYIRDISEDEVKDITKQATEYKGIAQTHSDEFLPYGTAYLDAERIK 408
BLAST of NO23G01760 vs. NCBI_GenBank
Match: CCI47075.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 167.2 bits (422), Expect = 6.300e-38 Identity = 117/224 (52.23%), Postives = 146/224 (65.18%), Query Frame = 0 Query: 12 LGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAKLS 236 +G+A RETGQALDR GL+ LG +KE +SRHRQ+ NL+D++P +A + +VAP+ATV+G+VE+ + S+WY VIRGD N+V IGN TNVQD VI T G PA IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX LW GNP K++R + D+EV + A+ Y A+A TH EF P+G YLDAE+ K S Sbjct: 9 VGRAFRETGQALDRVGLKVLGNNSYKEQFSRHRQIINLYDKQPAIAHDVWVAPNATVIGDVEICNDASVWYNVVIRGDLNAVTIGNRTNVQDRTVIHTSKENSPGVPAGTSIGNNVTIGHGCVLYSCTIENTSLIGMGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLWVGNPAKYVRDITDDEVQDIIRQAKEYQAIALTHSAEFLPYGTVYLDAERVKAS 232
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_002908534.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61617.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 164.5 bits (415), Expect = 4.100e-37 Identity = 120/230 (52.17%), Postives = 146/230 (63.48%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR GL L KE +SRHRQV L+D+RPR+A + +VAP+ATVVG+VE+ + S++Y VIRGD N V+IGN TNVQD VI T + G +IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K++R L D+EV A Y ++A TH +EF P+G AYLDAEK K Sbjct: 1 MMRKVTFELGRCVRETGQALDRLGLRVLNDNSFKEKFSRHRQVMALYDKRPRIAHDVWVAPNATVVGDVEICNDASVFYNVVIRGDLNQVRIGNRTNVQDRTVIHTASSTSPGLAPGANIGNDVTIGHGCTLYSCTVENNSLIGMGSIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYVRDLSDDEVADIAKQASEYKSIASTHSDEFLPYGTAYLDAEKIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_008871299.1 (hypothetical protein H310_07655 [Aphanomyces invadans] >ETW00274.1 hypothetical protein H310_07655 [Aphanomyces invadans]) HSP 1 Score: 164.1 bits (414), Expect = 5.400e-37 Identity = 129/229 (56.33%), Postives = 159/229 (69.43%), Query Frame = 0 Query: 5 IRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 +RK + LG+A+RETGQA+DR GL LG+ H+E +SRHRQV L+D+ P +A +++VAP+A+V+G+VE+ + SIWYG VIRGD N V IGN TN+QD AVI T T G IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LW G+P +F+R + ++EV V A Y LA TH EF P+G AYLDAE+ K Sbjct: 1 MRKAIYQLGRAVRETGQAVDRLGLRVLGSNLHREKFSRHRQVMALYDKVPMIAHDSWVAPNASVIGDVEICNDSSIWYGVVIRGDLNKVSIGNRTNIQDRAVIHTSSTTTPGLAPGTSIGNNVTVGHGAILYSCTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLWAGSPAQFVRDVSEDEVADLVKQATEYTKLAETHSEEFLPYGTAYLDAERIK 229
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_009523979.1 (hypothetical protein PHYSODRAFT_285582 [Phytophthora sojae] >EGZ21262.1 hypothetical protein PHYSODRAFT_285582 [Phytophthora sojae]) HSP 1 Score: 163.3 bits (412), Expect = 9.100e-37 Identity = 119/230 (51.74%), Postives = 146/230 (63.48%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR GL L KE +SRHRQV L+D+RP++A + +VAP+ATVVG+VE+ + S++Y VIRGD N V+IGN TNVQD VI T + G +IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K++R L D+EV A Y ++A TH +EF P+G AYLDAEK K Sbjct: 1 MMRKVTFELGRCVRETGQALDRLGLRVLNDNSFKEKFSRHRQVMALYDKRPKIAHDVWVAPNATVVGDVEICNDASVFYNVVIRGDLNQVRIGNRTNVQDRTVIHTASSTSPGLAPGANIGNDVTIGHGCTLYSCTVENNALIGMGSIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYVRDLSDDEVADITKQASEYKSIASTHSDEFLPYGTAYLDAEKIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: XP_008890951.1 (hypothetical protein PPTG_01107 [Phytophthora parasitica INRA-310] >ETI56121.1 hypothetical protein F443_01293 [Phytophthora parasitica P1569] >ETK95912.1 hypothetical protein L915_01223 [Phytophthora parasitica] >ETL49292.1 hypothetical protein L916_01206 [Phytophthora parasitica] >ETM02344.1 hypothetical protein L917_01180 [Phytophthora parasitica] >ETM55585.1 hypothetical protein L914_01223 [Phytophthora parasitica] >ETN24946.1 hypothetical protein PPTG_01107 [Phytophthora parasitica INRA-310] >ETO84854.1 hypothetical protein F444_01295 [Phytophthora parasitica P1976] >ETP25915.1 hypothetical protein F441_01271 [Phytophthora parasitica CJ01A1] >ETP53918.1 hypothetical protein F442_01235 [Phytophthora parasitica P10297] >KUF91114.1 Gamma carbonic anhydrase 1 [Phytophthora nicotianae] >KUG00036.1 3-methyl-2-oxobutanoate hydroxymethyltransferase [Phytophthora nicotianae]) HSP 1 Score: 163.3 bits (412), Expect = 9.100e-37 Identity = 128/230 (55.65%), Postives = 155/230 (67.39%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR GL L KE +SRHRQV L+D+RP++A + +VAP+ATVVG+VE+ + S++Y VIRGD N V+IGN TNVQD VI T + G +IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K++R L D+EV A Y ++A TH +EF P+G AYLDAEK K Sbjct: 1 MMRKVTFELGRCVRETGQALDRLGLRVLNDNSFKEKFSRHRQVMALYDKRPKIAHDVWVAPNATVVGDVEICNDASVFYNVVIRGDLNQVRIGNRTNVQDRTVIHTASSTSPGLAPGANIGNDVTIGHGCTLYSCTIENNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYVRDLSDDEVADITKQASEYKSIASTHSDEFLPYGTAYLDAEKIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: OQR93919.1 (hypothetical protein THRCLA_08309 [Thraustotheca clavata]) HSP 1 Score: 163.3 bits (412), Expect = 9.100e-37 Identity = 116/230 (50.43%), Postives = 149/230 (64.78%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQA+DR GL LG+ + KE +SRHRQ+ NL+D+ P VA +++VAP+A+V+G+VE+ ++ S+WYG VIRGD N V IGN TN+QD VI T T G IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXLW G+P +++R + D+EV A+ Y LA TH +EF P+G AYLDAE+ K Sbjct: 1 MLRKVTYELGRCVRETGQAVDRLGLRVLGSNQAKEKFSRHRQIMNLYDKVPSVAYDSWVAPNASVIGDVEICNEASVWYGCVIRGDLNKVSIGNRTNIQDRTVIHTSSTTTPGLAPGASIGNDVTVGHGCILYSCTIENNVLIGMGSIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGSPAQYVRDVTDDEVADLAKQAQEYKKLAETHSDEFLPYGTAYLDAERIK 230
BLAST of NO23G01760 vs. NCBI_GenBank
Match: GAY01201.1 (Hypothetical protein PINS_009033 [Pythium insidiosum]) HSP 1 Score: 163.3 bits (412), Expect = 9.100e-37 Identity = 125/236 (52.97%), Postives = 150/236 (63.56%), Query Frame = 0 Query: 4 MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRG------DRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAK 234 M+RK LG+ +RETGQALDR G+ LG KE +SRHRQV NL+D+RP +A + +VAP+ATVVG+VE+ + SIWY VIRG D N V+IGN TNVQD VI T G PA IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW GNP K+IR + ++EV A Y +A+TH +EF P+G AYLDAE+ K Sbjct: 189 MLRKVTFELGRCVRETGQALDRLGMRVLGDNAFKERFSRHRQVMNLYDKRPVIAHDVWVAPNATVVGDVEICNDASIWYNVVIRGMXSLCCDLNQVRIGNRTNVQDRTVIHTASNSTPGLPAGTSIGNDVTIGHGCILYSCTIENNALIGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWAGNPAKYIRDISEDEVKDITKQATEYKGIAQTHSDEFLPYGTAYLDAERIK 424
BLAST of NO23G01760 vs. NCBI_GenBank
Match: CCA20868.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 162.2 bits (409), Expect = 2.000e-36 Identity = 116/224 (51.79%), Postives = 142/224 (63.39%), Query Frame = 0 Query: 12 LGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQRPRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQDHAVITTVPTLDTGFPAKVDIGHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWGGNPVKFIRKLEDEEVVANVTAAEAYHALARTHENEFQPFGAAYLDAEKAKLS 236 +G+A RETGQALDR GL L +KE +SRHRQ+ NL D+RP +A + +VAP+ATV+G+VE+ + S+WY VIRGD N+V IGN TNVQD VI T G PA IG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX LW GNP K++R + D+EV + + Y A+A TH EF P+G YLDAE+ K S Sbjct: 9 VGRAFRETGQALDRVGLRVLEKNSYKEQFSRHRQIINLSDKRPTIAHDVWVAPNATVIGDVEICNDASVWYNVVIRGDLNAVTIGNRTNVQDRTVIHTSKDTSPGIPAGTSIGNNVTIGHGCVLYSCTIENTSLIGMGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLWVGNPAKYVRDITDDEVQDIIRQSNEYQAIALTHSAEFLPYGTVYLDAERLKAS 232 The following BLAST results are available for this feature:
BLAST of NO23G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01760 ID=NO23G01760|Name=NO23G01760|organism=Nannochloropsis oceanica|type=gene|length=1499bpback to top protein sequence of NO23G01760.1 >NO23G01760.1-protein ID=NO23G01760.1-protein|Name=NO23G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=237bpback to top Synonyms
Publications
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