NO23G01630, NO23G01630 (gene) Nannochloropsis oceanica

Overview
NameNO23G01630
Unique NameNO23G01630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1468
Alignment locationchr23:603201..604668 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:603201..604668 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G01630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL038nonsL038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL036nonsL036Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL035nonsL035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR062ncniR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR126ngnoR126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR125ngnoR125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR124ngnoR124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01630.1NO23G01630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01630.1NO23G01630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01630 ID=NO23G01630|Name=NO23G01630|organism=Nannochloropsis oceanica|type=gene|length=1468bp
ACGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGACTGTTTCACGTTGGGGA
GCCTGCCCGTGTGTTACCATGCTGCTTACAGGTACGTTTGCCGGCTGGTG
GAGGGGATGCGGGCGCTCACTCCTCAAGTGACCCTCTTCCTACTCGAGGA
GGAAGGCAGGAAGCAGGGAGGAGGAGGAGTGCTGGCTAAGTGCATGCTGA
TGGCCAATGGGCCGTTACCGGATTTCAAAGTGAGATGGGCGGATGGGGCG
GTTTTAACGTATAAGCTCAGGACGGGGGCCCTGGCCCTCACCTTAGGGGA
GTCCGTCCCTCTGGCCCTTCCTCCCTTCCCTCCTCGCAAGCATGAGTGGA
ACGTGGAGGGAGGAGGCTCGTGCTGGGTGTTGCAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGTGAGGGCGTACCTGAGCCAGGCTCAGGGGGC
CATGAGACGTTGCTTGGAAATTGGGGAGAGGTGGGAGAAAGGGAGGGAGG
GAGGGAAGGGGGGGAAGGGTCGAAGGATCATGTATGAATCAGTAGCGGCA
GCAGCGGAGGAGGCAGCGGCCGAGGCCAGGCGATGGAGAGAAAGATTTTC
GTTGTCGTTGTGTGGGAGGGGGGGGAGGGAGGGAGGCAGGAAGGGAGGGA
AGGCCGAGGAAAAAAGGGTGACGATGAATGGCATCAGCAGCCGCAGTCGA
AATGATGCTGGTGCTGCGAGGAAGGATAAAAGCGATAGGGAAAGCAACAG
CGACAACGTGAGCATCCACGCCCCCTTCTCTCTCCTCAAGACCAGGCCCA
TCCTTAACGCCCATAGCAGTGGCACTGGCGCCACAACCAGCAGCGGCAAC
AACACTACCACCACCAGCAGCACCAGCAGCAGCACCACCACCACCACCAC
CAGCAGCAGCAGCAGCAGCGATAACGCTAGTACCAAAGACGAGGACGGGC
ACAACAGTGCTCTCATTAAGCATCTCCCAGGCGTAGGTCAGGCGATCCGG
ACGAGGGAGGGGGCAGTGGAAGTCCGTTTTGTGGAAGACGGGAGTCTCCT
GACCATGAGTGCTGACGGGACATCAGTGAGGTATTGTCGGGAGGGAGAGG
GAGGAAGGGAGGGACAGAGCTTTGCTCTCCTTCCTTCTCAAAGAGGGGAA
AGAATGAAGGGAAAAATGCCGAGGGAAGTACGGGAGAAGCTCCGGATCGT
GCTGACACGCTTCTTGGCGTAAAGGGCGGGGGAATGAGGTTTGGCAGGTG
TAGATAGGAGGGCGTAGAAAGACGTAAAAAGCAGGGACATTCAAGAAGGA
CGAGGAGGCGGAATAGGAATAGGAATGGGAAGAAGCAGTGACGTTGTGGA
GTGCATGTGAAAAAAGCGAATAAGAAACCGGAAGGACGGTCGCGAGAGAC
GACTGGAAGCCGCCCGTGGAGCTTAAGATAGAGCAGTGGCAGAATTAAAG
AAAGGGCAAATAATTGAC
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protein sequence of NO23G01630.1

>NO23G01630.1-protein ID=NO23G01630.1-protein|Name=NO23G01630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MRALTPQVTLFLLEEEGRKQGGGGVLAKCMLMANGPLPDFKVRWADGAVL
TYKLRTGALALTLGESVPLALPPFPPRKHEWNVEGGGSCWVLQGGREGGR
EGGRVRAYLSQAQGAMRRCLEIGERWEKGREGGKGGKGRRIMYESVAAAA
EEAAAEARRWRERFSLSLCGRGGREGGRKGGKAEEKRVTMNGISSRSRND
AGAARKDKSDRESNSDNVSIHAPFSLLKTRPILNAHSSGTGATTSSGNNT
TTTSSTSSSTTTTTTSSSSSSDNASTKDEDGHNSALIKHLPGVGQAIRTR
EGAVEVRFVEDGSLLTMSADGTSVRYCREGEGGREGQSFALLPSQRGERM
KGKMPREVREKLRIVLTRFLA*
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Synonyms
Publications