NO23G01630.1, NO23G01630.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO23G01630.1
Unique NameNO23G01630.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1468
Alignment locationchr23:603201..604668 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:603201..604668 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G01630.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01630NO23G01630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO23G01630.1NO23G01630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO23G01630.1.cds1NO23G01630.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO23G01630.1 ID=NO23G01630.1|Name=NO23G01630.1|organism=Nannochloropsis oceanica|type=mRNA|length=1468bp
ACGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGACTGTTTCACGTTGGGGA
GCCTGCCCGTGTGTTACCATGCTGCTTACAGGTACGTTTGCCGGCTGGTG
GAGGGGATGCGGGCGCTCACTCCTCAAGTGACCCTCTTCCTACTCGAGGA
GGAAGGCAGGAAGCAGGGAGGAGGAGGAGTGCTGGCTAAGTGCATGCTGA
TGGCCAATGGGCCGTTACCGGATTTCAAAGTGAGATGGGCGGATGGGGCG
GTTTTAACGTATAAGCTCAGGACGGGGGCCCTGGCCCTCACCTTAGGGGA
GTCCGTCCCTCTGGCCCTTCCTCCCTTCCCTCCTCGCAAGCATGAGTGGA
ACGTGGAGGGAGGAGGCTCGTGCTGGGTGTTGCAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGTGAGGGCGTACCTGAGCCAGGCTCAGGGGGC
CATGAGACGTTGCTTGGAAATTGGGGAGAGGTGGGAGAAAGGGAGGGAGG
GAGGGAAGGGGGGGAAGGGTCGAAGGATCATGTATGAATCAGTAGCGGCA
GCAGCGGAGGAGGCAGCGGCCGAGGCCAGGCGATGGAGAGAAAGATTTTC
GTTGTCGTTGTGTGGGAGGGGGGGGAGGGAGGGAGGCAGGAAGGGAGGGA
AGGCCGAGGAAAAAAGGGTGACGATGAATGGCATCAGCAGCCGCAGTCGA
AATGATGCTGGTGCTGCGAGGAAGGATAAAAGCGATAGGGAAAGCAACAG
CGACAACGTGAGCATCCACGCCCCCTTCTCTCTCCTCAAGACCAGGCCCA
TCCTTAACGCCCATAGCAGTGGCACTGGCGCCACAACCAGCAGCGGCAAC
AACACTACCACCACCAGCAGCACCAGCAGCAGCACCACCACCACCACCAC
CAGCAGCAGCAGCAGCAGCGATAACGCTAGTACCAAAGACGAGGACGGGC
ACAACAGTGCTCTCATTAAGCATCTCCCAGGCGTAGGTCAGGCGATCCGG
ACGAGGGAGGGGGCAGTGGAAGTCCGTTTTGTGGAAGACGGGAGTCTCCT
GACCATGAGTGCTGACGGGACATCAGTGAGGTATTGTCGGGAGGGAGAGG
GAGGAAGGGAGGGACAGAGCTTTGCTCTCCTTCCTTCTCAAAGAGGGGAA
AGAATGAAGGGAAAAATGCCGAGGGAAGTACGGGAGAAGCTCCGGATCGT
GCTGACACGCTTCTTGGCGTAAAGGGCGGGGGAATGAGGTTTGGCAGGTG
TAGATAGGAGGGCGTAGAAAGACGTAAAAAGCAGGGACATTCAAGAAGGA
CGAGGAGGCGGAATAGGAATAGGAATGGGAAGAAGCAGTGACGTTGTGGA
GTGCATGTGAAAAAAGCGAATAAGAAACCGGAAGGACGGTCGCGAGAGAC
GACTGGAAGCCGCCCGTGGAGCTTAAGATAGAGCAGTGGCAGAATTAAAG
AAAGGGCAAATAATTGAC
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protein sequence of NO23G01630.1

>NO23G01630.1-protein ID=NO23G01630.1-protein|Name=NO23G01630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MRALTPQVTLFLLEEEGRKQGGGGVLAKCMLMANGPLPDFKVRWADGAVL
TYKLRTGALALTLGESVPLALPPFPPRKHEWNVEGGGSCWVLQGGREGGR
EGGRVRAYLSQAQGAMRRCLEIGERWEKGREGGKGGKGRRIMYESVAAAA
EEAAAEARRWRERFSLSLCGRGGREGGRKGGKAEEKRVTMNGISSRSRND
AGAARKDKSDRESNSDNVSIHAPFSLLKTRPILNAHSSGTGATTSSGNNT
TTTSSTSSSTTTTTTSSSSSSDNASTKDEDGHNSALIKHLPGVGQAIRTR
EGAVEVRFVEDGSLLTMSADGTSVRYCREGEGGREGQSFALLPSQRGERM
KGKMPREVREKLRIVLTRFLA*
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mRNA from alignment at chr23:603201..604668+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO23G01630.1 ID=NO23G01630.1|Name=NO23G01630.1|organism=Nannochloropsis oceanica|type=mRNA|length=1468bp|location=Sequence derived from alignment at chr23:603201..604668+ (Nannochloropsis oceanica)
ACGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGACTGTTTCACGTTGGGGA
GCCTGCCCGTGTGTTACCATGCTGCTTACAGGTACGTTTGCCGGCTGGTG
GAGGGGATGCGGGCGCTCACTCCTCAAGTGACCCTCTTCCTACTCGAGGA
GGAAGGCAGGAAGCAGGGAGGAGGAGGAGTGCTGGCTAAGTGCATGCTGA
TGGCCAATGGGCCGTTACCGGATTTCAAAGTGAGATGGGCGGATGGGGCG
GTTTTAACGTATAAGCTCAGGACGGGGGCCCTGGCCCTCACCTTAGGGGA
GTCCGTCCCTCTGGCCCTTCCTCCCTTCCCTCCTCGCAAGCATGAGTGGA
ACGTGGAGGGAGGAGGCTCGTGCTGGGTGTTGCAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGTGAGGGCGTACCTGAGCCAGGCTCAGGGGGC
CATGAGACGTTGCTTGGAAATTGGGGAGAGGTGGGAGAAAGGGAGGGAGG
GAGGGAAGGGGGGGAAGGGTCGAAGGATCATGTATGAATCAGTAGCGGCA
GCAGCGGAGGAGGCAGCGGCCGAGGCCAGGCGATGGAGAGAAAGATTTTC
GTTGTCGTTGTGTGGGAGGGGGGGGAGGGAGGGAGGCAGGAAGGGAGGGA
AGGCCGAGGAAAAAAGGGTGACGATGAATGGCATCAGCAGCCGCAGTCGA
AATGATGCTGGTGCTGCGAGGAAGGATAAAAGCGATAGGGAAAGCAACAG
CGACAACGTGAGCATCCACGCCCCCTTCTCTCTCCTCAAGACCAGGCCCA
TCCTTAACGCCCATAGCAGTGGCACTGGCGCCACAACCAGCAGCGGCAAC
AACACTACCACCACCAGCAGCACCAGCAGCAGCACCACCACCACCACCAC
CAGCAGCAGCAGCAGCAGCGATAACGCTAGTACCAAAGACGAGGACGGGC
ACAACAGTGCTCTCATTAAGCATCTCCCAGGCGTAGGTCAGGCGATCCGG
ACGAGGGAGGGGGCAGTGGAAGTCCGTTTTGTGGAAGACGGGAGTCTCCT
GACCATGAGTGCTGACGGGACATCAGTGAGGTATTGTCGGGAGGGAGAGG
GAGGAAGGGAGGGACAGAGCTTTGCTCTCCTTCCTTCTCAAAGAGGGGAA
AGAATGAAGGGAAAAATGCCGAGGGAAGTACGGGAGAAGCTCCGGATCGT
GCTGACACGCTTCTTGGCGTAAAGGGCGGGGGAATGAGGTTTGGCAGGTG
TAGATAGGAGGGCGTAGAAAGACGTAAAAAGCAGGGACATTCAAGAAGGA
CGAGGAGGCGGAATAGGAATAGGAATGGGAAGAAGCAGTGACGTTGTGGA
GTGCATGTGAAAAAAGCGAATAAGAAACCGGAAGGACGGTCGCGAGAGAC
GACTGGAAGCCGCCCGTGGAGCTTAAGATAGAGCAGTGGCAGAATTAAAG
AAAGGGCAAATAATTGAC
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Coding sequence (CDS) from alignment at chr23:603201..604668+

>NO23G01630.1 ID=NO23G01630.1|Name=NO23G01630.1|organism=Nannochloropsis oceanica|type=CDS|length=1116bp|location=Sequence derived from alignment at chr23:603201..604668+ (Nannochloropsis oceanica)
ATGCGGGCGCTCACTCCTCAAGTGACCCTCTTCCTACTCGAGGAGGAAGG
CAGGAAGCAGGGAGGAGGAGGAGTGCTGGCTAAGTGCATGCTGATGGCCA
ATGGGCCGTTACCGGATTTCAAAGTGAGATGGGCGGATGGGGCGGTTTTA
ACGTATAAGCTCAGGACGGGGGCCCTGGCCCTCACCTTAGGGGAGTCCGT
CCCTCTGGCCCTTCCTCCCTTCCCTCCTCGCAAGCATGAGTGGAACGTGG
AGGGAGGAGGCTCGTGCTGGGTGTTGCAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGTGAGGGCGTACCTGAGCCAGGCTCAGGGGGCCATGAG
ACGTTGCTTGGAAATTGGGGAGAGGTGGGAGAAAGGGAGGGAGGGAGGGA
AGGGGGGGAAGGGTCGAAGGATCATGTATGAATCAGTAGCGGCAGCAGCG
GAGGAGGCAGCGGCCGAGGCCAGGCGATGGAGAGAAAGATTTTCGTTGTC
GTTGTGTGGGAGGGGGGGGAGGGAGGGAGGCAGGAAGGGAGGGAAGGCCG
AGGAAAAAAGGGTGACGATGAATGGCATCAGCAGCCGCAGTCGAAATGAT
GCTGGTGCTGCGAGGAAGGATAAAAGCGATAGGGAAAGCAACAGCGACAA
CGTGAGCATCCACGCCCCCTTCTCTCTCCTCAAGACCAGGCCCATCCTTA
ACGCCCATAGCAGTGGCACTGGCGCCACAACCAGCAGCGGCAACAACACT
ACCACCACCAGCAGCACCAGCAGCAGCACCACCACCACCACCACCAGCAG
CAGCAGCAGCAGCGATAACGCTAGTACCAAAGACGAGGACGGGCACAACA
GTGCTCTCATTAAGCATCTCCCAGGCGTAGGTCAGGCGATCCGGACGAGG
GAGGGGGCAGTGGAAGTCCGTTTTGTGGAAGACGGGAGTCTCCTGACCAT
GAGTGCTGACGGGACATCAGTGAGGTATTGTCGGGAGGGAGAGGGAGGAA
GGGAGGGACAGAGCTTTGCTCTCCTTCCTTCTCAAAGAGGGGAAAGAATG
AAGGGAAAAATGCCGAGGGAAGTACGGGAGAAGCTCCGGATCGTGCTGAC
ACGCTTCTTGGCGTAA
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Synonyms
Publications