NO23G01560, NO23G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01560 vs. NCBI_GenBank
Match: EWM27835.1 (naphthoate synthase [Nannochloropsis gaditana]) HSP 1 Score: 393.7 bits (1010), Expect = 4.200e-106 Identity = 189/217 (87.10%), Postives = 202/217 (93.09%), Query Frame = 0 Query: 1 MAPSLLRTPPPPTPRRDGFHRTSSGPAAWEDRSQALGLTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 M+ R PPPTPRRD FH TS PAAW+D+S ALGLTDVIYR AP+EGIAKLSINRPS+RNAFRPTTIRELKRC+ALAQDDL++GVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKP++AMVAGYAIGGGHILHMLCDLTI A+NAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSA EA +MG+ Sbjct: 1 MSEHAARKAPPPTPRRDAFHLTSCAPAAWQDQSTALGLTDVIYRTAPEEGIAKLSINRPSLRNAFRPTTIRELKRCLALAQDDLKIGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPIIAMVAGYAIGGGHILHMLCDLTICAENAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAHEAQDMGL 217
BLAST of NO23G01560 vs. NCBI_GenBank
Match: XP_005836284.1 (hypothetical protein GUITHDRAFT_85732 [Guillardia theta CCMP2712] >EKX49304.1 hypothetical protein GUITHDRAFT_85732 [Guillardia theta CCMP2712]) HSP 1 Score: 311.6 bits (797), Expect = 2.100e-81 Identity = 145/204 (71.08%), Postives = 172/204 (84.31%), Query Frame = 0 Query: 12 PTPRRDGFHRTSSGPAAWEDRSQALGLTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEM 216 P +DGFH S+ W DR+QA D+ Y + EGIAK++INRP V NAFRP TI+EL+ ALAQDD+ +GVIIL GEG AFCSGGDQ++RGEGGYDDG+E PRL+VLDLQVQMRRCPKPV+AM+AGYA+GGGHILHM+CDL+++ADNA+FGQTGP+VGSFDAGYGSSHMAR+VGQKKAREIWFLCR Y+A+EALEM Sbjct: 12 PQQEKDGFHLVSNKDTQWHDRTQAQNFKDIRYHTS-DEGIAKITINRPEVHNAFRPLTIQELRTAFALAQDDVSIGVIILCGEGPNAFCSGGDQTLRGEGGYDDGTEPVPRLSVLDLQVQMRRCPKPVIAMIAGYAVGGGHILHMVCDLSLAADNALFGQTGPKVGSFDAGYGSSHMARIVGQKKAREIWFLCRLYNAKEALEM 214
BLAST of NO23G01560 vs. NCBI_GenBank
Match: EJK47907.1 (hypothetical protein THAOC_33339 [Thalassiosira oceanica]) HSP 1 Score: 274.6 bits (701), Expect = 2.800e-70 Identity = 135/212 (63.68%), Postives = 164/212 (77.36%), Query Frame = 0 Query: 11 PPTPRRDGFHRTSSGPAAWEDRSQALGLTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTG----EGDEAFCSGGDQSVRGE-GGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 PPTP RDGFH S P + D + TD+ Y V+ + A+++ +RP V +AFRPTTI E++R + LAQDD +VGVIILT E AFC+GGDQSVR GGYDDGSE APRL VLDLQ+QMRRCPKP+VA+V GYAIGGGHILHM DLT++ D+ VFGQ GPR+GS DAGYGS H+AR+VGQKKARE+WFLCR+YSA+EAL+MG+ Sbjct: 25 PPTPSRDGFHLVPSHPVVY-DVDMSSDFTDITYHVSTIDCCARIAFDRPQVLHAFRPTTINEVRRALELAQDDTRVGVIILTSNIIDERTPAFCAGGDQSVRSSGGGYDDGSEAAPRLRVLDLQIQMRRCPKPIVAVVRGYAIGGGHILHMCADLTLAGDDGVFGQVGPRMGSVDAGYGSVHLARMVGQKKAREVWFLCRYYSAKEALQMGL 235
BLAST of NO23G01560 vs. NCBI_GenBank
Match: PNW87232.1 (hypothetical protein CHLRE_02g114250v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 274.2 bits (700), Expect = 3.700e-70 Identity = 140/198 (70.71%), Postives = 164/198 (82.83%), Query Frame = 0 Query: 23 SSGPAAWEDRSQALG---LTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 S PA W R +LG LTDVIY + +EGIAK++INRP RNAFRP TI+EL C + A+DD +VGVI+LTG G+ AFCSGGDQSVRG+GGY G + RL VLDLQVQ+RR PKPVVAMVAGYA+GGGHILHM+CDLTI+ADNA+FGQTGP+VGSFDAGYGS+HMARLVGQKKARE+WFL R Y A+EAL+MG+ Sbjct: 79 SRAPAMWR-RVASLGKEELTDVIYEKS-EEGIAKITINRPDKRNAFRPQTIQELSWCFSDARDDPRVGVIVLTGAGELAFCSGGDQSVRGKGGY-VGEDGIARLNVLDLQVQIRRLPKPVVAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSTHMARLVGQKKAREMWFLARLYDAREALDMGL 273
BLAST of NO23G01560 vs. NCBI_GenBank
Match: GAX76709.1 (hypothetical protein CEUSTIGMA_g4155.t1 [Chlamydomonas eustigma]) HSP 1 Score: 271.9 bits (694), Expect = 1.800e-69 Identity = 132/180 (73.33%), Postives = 155/180 (86.11%), Query Frame = 0 Query: 38 LTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 L DV Y + EGIAK++INRPS RNAF P T+ EL C A A+DD +VGVIILTGEG AFCSGGDQSVRG+GGY G++E PRL VLDLQ+Q+RR PKPV+AMVAGYA+GGGHILHM+CD+TI+ADNAVFGQTGP+VGSFDAGYGS+ MARL+GQKKARE+WFL R YSAQ+AL+MG+ Sbjct: 23 LQDVKYEKSEGEGIAKITINRPSKRNAFTPRTVLELSWCFADARDDPKVGVIILTGEGTLAFCSGGDQSVRGQGGY-VGADEIPRLNVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDITIAADNAVFGQTGPKVGSFDAGYGSTQMARLIGQKKAREMWFLARMYSAQQALDMGL 201
BLAST of NO23G01560 vs. NCBI_GenBank
Match: XP_002953258.1 (hypothetical protein VOLCADRAFT_82144 [Volvox carteri f. nagariensis] >EFJ45568.1 hypothetical protein VOLCADRAFT_82144 [Volvox carteri f. nagariensis]) HSP 1 Score: 270.8 bits (691), Expect = 4.100e-69 Identity = 133/180 (73.89%), Postives = 152/180 (84.44%), Query Frame = 0 Query: 38 LTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 LTDVIY A EGIAK++INRP RNAFRP T++E+ C A+DD +VGVIILTG GD AFCSGGDQSVRG+GGY G++ RL VLDLQ+Q+RR PKPVVAMVAGYA+GGGHILHM+CDLTI+ADNAVFGQTGP+VGSFDAGYGS+HMARLVGQKKARE+WFL R Y A EA MG+ Sbjct: 74 LTDVIYEKAIGEGIAKITINRPERRNAFRPRTVQEMSWCFGDARDDPEVGVIILTGAGDLAFCSGGDQSVRGQGGY-VGADGIARLNVLDLQIQIRRLPKPVVAMVAGYAVGGGHILHMICDLTIAADNAVFGQTGPKVGSFDAGYGSTHMARLVGQKKAREMWFLARLYDAHEAHRMGL 252
BLAST of NO23G01560 vs. NCBI_GenBank
Match: XP_001699664.1 (naphthoate synthase [Chlamydomonas reinhardtii]) HSP 1 Score: 270.0 bits (689), Expect = 7.000e-69 Identity = 133/180 (73.89%), Postives = 156/180 (86.67%), Query Frame = 0 Query: 38 LTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 LTDVIY + +EGIAK++INRP RNAFRP TI+EL C + A+DD +VGVI+LTG G+ AFCSGGDQSVRG+GGY G + RL VLDLQVQ+RR PKPVVAMVAGYA+GGGHILHM+CDLTI+ADNA+FGQTGP+VGSFDAGYGS+HMARLVGQKKARE+WFL R Y A+EAL+MG+ Sbjct: 13 LTDVIYEKS-EEGIAKITINRPDKRNAFRPQTIQELSWCFSDARDDPRVGVIVLTGAGELAFCSGGDQSVRGKGGY-VGEDGIARLNVLDLQVQIRRLPKPVVAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSTHMARLVGQKKAREMWFLARLYDAREALDMGL 190
BLAST of NO23G01560 vs. NCBI_GenBank
Match: XP_001416028.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO94320.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 266.2 bits (679), Expect = 1.000e-67 Identity = 131/208 (62.98%), Postives = 165/208 (79.33%), Query Frame = 0 Query: 23 SSGPAAW-------EDRSQA--LGLTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDD----GSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 S P +W ++RS A L DVIY +P EGIA+++INRP RNAF P T++E++ C+ A+DD+ +GV+++ G GD AFCSGGDQS RG+GGY D G+EE PRL VLDLQ+Q+RR PKPV+A VAGYA+GGGHILHM+CDLTI+ADNAVFGQTGP+VGSFDAGYGS+HMARL+GQKKARE+WFL R Y+A +AL+MG+ Sbjct: 46 SRDPVSWVKCAPGADERSVASHYELRDVIYEKSP-EGIARVTINRPERRNAFTPRTVKEMRWCMDDARDDMTIGVVVMRGMGDLAFCSGGDQSARGDGGYVDAKAGGAEETPRLNVLDLQMQIRRMPKPVIASVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSTHMARLIGQKKAREMWFLARLYNASDALKMGL 252
BLAST of NO23G01560 vs. NCBI_GenBank
Match: WP_009858004.1 (1,4-dihydroxy-2-naphthoyl-CoA synthase [Rubrivivax benzoatilyticus] >EGJ11439.1 dihydroxynaphthoic acid synthetase [Rubrivivax benzoatilyticus JA2 = ATCC BAA-35]) HSP 1 Score: 265.8 bits (678), Expect = 1.300e-67 Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 0 Query: 37 GLTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 G D++Y + +EGIAK++INRP VRNAFRP T++E++R A A+DD VGVIILTG G +AFCSGGDQ VRG GGY G + PRL VLDLQ Q+R PKPVVAMVAGYAIGGGH+LHM+CDLTI+ADNA FGQTGPRVGSFD GYG+S+MAR+VGQKKAREIWFLCR Y AQEAL+MG+ Sbjct: 17 GYGDIVYEKS-EEGIAKITINRPEVRNAFRPETVQEMERAFADARDDENVGVIILTGAGKDAFCSGGDQRVRGHGGY-VGGDGVPRLNVLDLQRQIRTLPKPVVAMVAGYAIGGGHVLHMICDLTIAADNARFGQTGPRVGSFDGGYGASYMARIVGQKKAREIWFLCRQYGAQEALDMGL 195
BLAST of NO23G01560 vs. NCBI_GenBank
Match: WP_014429918.1 (1,4-dihydroxy-2-naphthoyl-CoA synthase [Rubrivivax gelatinosus] >BAL97063.1 naphthoate synthase MenB [Rubrivivax gelatinosus IL144]) HSP 1 Score: 265.8 bits (678), Expect = 1.300e-67 Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 0 Query: 37 GLTDVIYRVAPQEGIAKLSINRPSVRNAFRPTTIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSEEAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAVFGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGV 218 G D++Y + +EGIAK++INRP VRNAFRP T++E++R A A+DD VGVIILTG G +AFCSGGDQ VRG GGY G + PRL VLDLQ Q+R PKPVVAMVAGYAIGGGH+LHM+CDLTI+ADNA FGQTGPRVGSFD GYG+S+MAR+VGQKKAREIWFLCR Y AQEAL+MG+ Sbjct: 17 GYGDIVYEKS-EEGIAKITINRPEVRNAFRPETVQEMERAFADARDDENVGVIILTGAGKDAFCSGGDQRVRGHGGY-VGGDGVPRLNVLDLQRQIRTLPKPVVAMVAGYAIGGGHVLHMICDLTIAADNARFGQTGPRVGSFDGGYGASYMARIVGQKKAREIWFLCRQYGAQEALDMGL 195 The following BLAST results are available for this feature:
BLAST of NO23G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01560 ID=NO23G01560|Name=NO23G01560|organism=Nannochloropsis oceanica|type=gene|length=1776bpback to top protein sequence of NO23G01560.1 >NO23G01560.1-protein ID=NO23G01560.1-protein|Name=NO23G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top protein sequence of NO23G01560.2 >NO23G01560.2-protein ID=NO23G01560.2-protein|Name=NO23G01560.2|organism=Nannochloropsis oceanica|type=polypeptide|length=304bpback to top Synonyms
Publications
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