NO23G01120, NO23G01120 (gene) Nannochloropsis oceanica

Overview
NameNO23G01120
Unique NameNO23G01120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2726
Alignment locationchr23:410154..412879 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:410154..412879 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL034nonsL034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006383NSK006383Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01120.1NO23G01120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|197475gene_8467Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01120.1NO23G01120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01120 ID=NO23G01120|Name=NO23G01120|organism=Nannochloropsis oceanica|type=gene|length=2726bp
ATGTCCTCGTATTCCCTTGGCGAGAAAGAGGAGGCGATGAAAGTGTTGAG
AACGAAGAGGGGGAGGCAGGCCTTAAGGGAGGAAGGGTCAAAATTGACCT
ATGGGAGAGTGACGGCGTTCAAGTACTTTTGCAAGTACATGGGAATGGAG
GAGGAGGAGGAGGGAGGAAGGGAGGGAGGGAGGGATGATGCGCCTCTTTG
TGATCCTCCCCCTCCTCCTCCTTCACCGTCGGCAAGCGGAGGAGAAGGAG
GGAGGGGATGTTTGACAGGCTTGGTGTTGCTTCAGAAGGAGGTGAAGAGA
GGTTTCAAGAAATGGTTGATGCGCCGAGGAGGAGGGCATGGGGGAGGGCG
AGAAGTAGGGAAGGAAACGGCGGATGGATACTTGACCGTTTCGCTGTACA
TCTTACACCAGACATTTAATCGGGCTAGGCCACGGAGAGgtagggacgga
aagagggagggagggagggaggtagaggagggaggatctctcccgaaatg
gtcctcattttccgccggtatgtccttacccctcgctccctctctcttcc
tccctccctccctccctcctttctccctccctccagCCCCCACAGCCATG
GGTCCTTGTGAGGCGCTCTCGTTCATCACCACTCATCACTGCCTAGTGTC
CCACCTCCTGGCAACGGCCTCATCTCCTCGTTTCCCTCCCCAAGTCGTGC
AGACCGCCTGGCGACAGTTTGTGAAGTACCTGAAGgtggggaaggaggga
ggcagagagagagggagaggtgggctggatgtgtgaataataaggtatgc
cttgtctccttccatcgtatccttatcttgatccctccttgtccttctct
gaaaaagtcgcatccttccagccctcccacctcttccttcctcccttctc
cttctcccccctccgccttcctattcttcaacctccctcccatctacgcg
tactgcggccttcgttttttagttcgacttcgaggatggcatccatttcc
tcttattgaagaaaatccctttccctctttccacttcgacttgtcacact
gaatacacacacctttcccttccttttccctctccctctttccttctacc
acgcagCACCGCTCCACCACCTCCTCGTCGTCGTTCCCCCAGCCCCACTC
CTTCTCCTCATTGTACAATCCCGTTTCGTCGGGCCGCATCGCCTCCAACC
TCCGCGCGCATTTCGCGGGGCTGGGGGTCATTGAAGAGCCCTTGGCCCTC
GAATTTCAAAAATATCTCCTTTCCTTGCCGCCACCCGCGGGGAGGGAGGG
AGGGAGGGAGGGAGGAAGGGCATTGGCGCCTATAACTGCCTATCGGTACA
CCCGGTCCCTGGCACGGGCGTTCAAGATAGAGGTATGGGAGGAGGAAATG
CGGGGGGGGGAGGAAGAGGTGGAGAGCGCACCGGCAGGGGGGAGGGAGGG
AGGGAGGGAGGGAGGGCGGGCAGGGCGACGCATGCCGTGGCACCGCTCTC
GCGTGTTTAATTTTTTCCTCGCCCCTAAGAATGAGGGAAGGATTCTAGTG
ATGAAGAGGCGGACGAGTGACAAGAGCACCCGGGCGGCCTTGAAGTATTT
TGTGGATTTCTGCCGTGCCTGTCGGCGGGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGTTGGGTGCTGCCCTTGCCCCGGGTTACAGTGGAGGGT
TCTCACTTGAAGGGGACGGCCATGGGAGAGATGGCGCTGAGGGAGGTCGG
GGAGGAGGTAGAGGAGGAGGAGGTAGAGGAGGAGGAGGAAGAGGAGGAGG
TAGAGGAAGAGGAGGAGGAGGAGGAGGAAAGGGAGAAGGGCGAGAAGAGG
GAAGCAAAGAAAAAGGGGAAGAAGAGAAGATGGGCGTCGGAAAGAGAGGA
CGAGGACGAGGACGAGGGCGAGGAAGGAAGGGAAGACCCAAAATTAAAGA
GGCCCGAAAGGCGCAGTCTCTTCGCTTCCGAAATCGGAGGGGGAGGGAGG
CTGGGAGGGATGGTGGGAGGGATGGGAGGGAGGAGGCGGGAAGAGTTTGA
GTCGTGGTGTAGGGAGGCGAAGGGTCTGGCAGGTGGAGCTATCTACGGGC
TGAAGGTTGAGAGACTGCTGGGGAAAGTTTGGCAGCAGCAGCAGCAGCAC
CACCACCACCACCAGCAGCAGCAGCACCACCACCACCAGCAGCAGCAGCC
GCCGCCGCCGCCGCCGCCGCCGCCGTCGTCGTTAGCCAAGTGCAGCGACG
AGGACTTTCAGCGATGGGTTATCTCCGTCGAGTCCTCTCTCGCTTCCTCT
TCCCCCTCCTCCTCCTCCTCCTCTTCGCTCCCTTCCTCGTCTTCGGGGGT
GGTGCATCAATCCGTCGCTCTCTTTTGGGAGTGGGTGACAGGGCAGTCGT
GGCCTCATCCTCCCCCTTCCTCCCTCCCTCCCCCTCTTTTGGAGCAAGGG
AAGGATGACAATGGAAAGATGAAGGAAGACGAGGACGAGGACGAGGAAAG
GAGGAAGGAAGGGATTGCTGGTCGAGGCGGAGATGGGAGAAGGCTGCTCT
GGGATGGCACTGAGGATGGGAGAGGAGGAGGGAGGGAGGGAGGGATGGCT
ATCGGGAAGGAGAGAGGGGCAGCTCAATCAATCCTAGGCAAAGATGACGC
CTCCTCCGATGAGGAAGAGAGGGAAGAGGAAGGGGGGGGAGGGAGGGAGG
GGTGCAGATGCCCAAGCAAGCGATGA
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protein sequence of NO23G01120.1

>NO23G01120.1-protein ID=NO23G01120.1-protein|Name=NO23G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=736bp
MSSYSLGEKEEAMKVLRTKRGRQALREEGSKLTYGRVTAFKYFCKYMGME
EEEEGGREGGRDDAPLCDPPPPPPSPSASGGEGGRGCLTGLVLLQKEVKR
GFKKWLMRRGGGHGGGREVGKETADGYLTVSLYILHQTFNRARPRRAPTA
MGPCEALSFITTHHCLVSHLLATASSPRFPPQVVQTAWRQFVKYLKHRST
TSSSSFPQPHSFSSLYNPVSSGRIASNLRAHFAGLGVIEEPLALEFQKYL
LSLPPPAGREGGREGGRALAPITAYRYTRSLARAFKIEVWEEEMRGGEEE
VESAPAGGREGGREGGRAGRRMPWHRSRVFNFFLAPKNEGRILVMKRRTS
DKSTRAALKYFVDFCRACRRGREGGREGGREGWVLPLPRVTVEGSHLKGT
AMGEMALREVGEEVEEEEVEEEEEEEEVEEEEEEEEEREKGEKREAKKKG
KKRRWASEREDEDEDEGEEGREDPKLKRPERRSLFASEIGGGGRLGGMVG
GMGGRRREEFESWCREAKGLAGGAIYGLKVERLLGKVWQQQQQHHHHHQQ
QQHHHHQQQQPPPPPPPPPSSLAKCSDEDFQRWVISVESSLASSSPSSSS
SSSLPSSSSGVVHQSVALFWEWVTGQSWPHPPPSSLPPPLLEQGKDDNGK
MKEDEDEDEERRKEGIAGRGGDGRRLLWDGTEDGRGGGREGGMAIGKERG
AAQSILGKDDASSDEEEREEEGGGGREGCRCPSKR*
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Synonyms
Publications