NO23G00840, NO23G00840 (gene) Nannochloropsis oceanica

Overview
NameNO23G00840
Unique NameNO23G00840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4307
Alignment locationchr23:312214..316520 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:312214..316520 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL034nonsL034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006334NSK006334Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602005gene_8434Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00840.5NO23G00840.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00840.4NO23G00840.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00840.3NO23G00840.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00840.2NO23G00840.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00840.1NO23G00840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00840.5NO23G00840.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00840.4NO23G00840.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00840.3NO23G00840.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00840.2NO23G00840.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00840.1NO23G00840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00840 ID=NO23G00840|Name=NO23G00840|organism=Nannochloropsis oceanica|type=gene|length=4307bp
CCAGTACTGCAACGAGAGAGAAGCATCGCTTGGAGAAACGAACTTGAGTT
TTTGATTTTCAAAGCTTTGACTTGACGTTGTCTTGCTTCTTGTAAGTATA
TTTCCTCGGGGATAGTTTTAAAGGGAGCATGCAGAAGCCGTATGAAACTG
TACAATAGAGTCTATCAACATACTCATGGGCGCGTTCAAGTCTTGTGTAC
TTGAGACATTTCGGGGCCTCTCTCTCTGACCGCCTGCAACCGCCCGGGAG
CCGTTGGACAAAACATGGGGGCGTCGCACGCCACGGAGGCAGTATAGCGG
ATCATACCCTGGGATACAAAAATAAGTATGAATATGGTGGTGTATGGAGG
AGCAATTCTTAATTGTGAACAGGAACCTAAGTGACAAGAGTATCGATATA
GTACTTGTTTGGAAACAATCTGCATACGTACTCGCTTGCTATGTATAAGA
TATGCCTGGGCGAATATACCTCGACCTCATCTAATCACTTTTTGGAGAAG
TATTTTGAAAAAGTAAAAGCATTTCTAAATGGCCAGTATGATTGATCAAG
TACGACTTTATGTCAATAGTCGGTCATCAGTTATAGTTATGCGTGACTTC
TCTCGAGCAACAACTAGTGGTCGTGCAATCGTGCATATTAGATTCCCTTT
GAGCAACATCTATGAATATGCTGCTAAACTTACAAAGGAAAATATGGTTT
TTAATTGGTCTGGAACGGCTGGTGGCAAAGGGGAAGGGCAGTTGACAACG
CCGAGGCCGGGGAAGAAGACCTTTAGGCTACAGACATTACGGTTTGAATG
ATATAATAAGTAATGACAGTGGTTACGACGGTGATCATGACATGGTGAGA
GAATGAAGGGGGAAAGGGAGGGACTGAAGGAGGGATGTGTTTTGGTTCGG
CGTTTGACAAAGAGTGTGTGGTGGAATTTTATTCCATTTTCGTATCAATA
GTTATATATATATATTGTGGAAAGAGCAGTGAGAATAATCAGAAAGAGGG
ACATTATAGGTACATGATTTAATCACTGTTTAATTGGTCATCAATGACAT
CATTGGGGGCTGGTATGGTGGTGTAGATGTTAAAAAAAATGAACATTTTT
AATTGCTGTGCGACTGTGGTATATATATATGTCTGCCCACGTGATTCAAG
TAGGACCGTTTTTGTGAAAATTATCATTCCTCCGTGATGAATTTACCGTT
GGAGTAATGTTAATATGCGATGGGCTTCCTGGCTGATCCTGGTGCTAATC
TGTCCTGCGGGAAAATTAGTTCTGCCTGTTTTCAAGACGGACACATATAG
CTGTAAGTAATCGTGGCAGTCGTCCAAAAGGTGATTCGTTGTGGTGAAGG
AAGAAGGAAGAGGAAAAGAAGGTTTTCAATTTGCACATTCAGATGACCAA
GCAGGATTATCCTGCCGGCTCGAAGCATAGAACGAGCTAGTATTGTAAAG
AGATGTTGTAAAATAAGGAATCGCGCAAGGGCAGCAGGCACAGAGAGGTT
GGAGGAAAGATATGAGAAAGCATCGCGAAAATCAACCTGCTTGCCCTTTA
CGAAGTGTAGGCGATGTCAGATCTCACCAATAACGAAAGAATCCTCGTTC
TCCCTACCAAGTCTGCCTCTCATGTCGATGCTCCCATACGAGGCTGCCTT
AAGCACATTGGGCGGGTAAACGAGGAGACATCAAATAAGGGACGCGCCAA
CGCCTTGACTACGGCCTCAACTTAAATGCTCTCTCCTGAATTATTTGCTA
TGTTGATAAGGGGTGCGCGAGACGTTATTTGTAAGGCCGCATGGTTGTAT
GTGCATGGGTCCGAGGGACAAGTGCTGGGGGGGTAACGAGCGTCCTCTGC
CTCCTACCGAGGGAATACCCGATTTATCTCACAACATGCACATTAAAACA
TGTATAATTACACGTCGACATAACTCACGGAAACAAGACTGCGGCGGTGC
CAACAGTCAGCGGCCTGCAATGGCACTGTCTTGACACTCCCCGTCGTCTA
CCTCATCCATCATCACAGGGGGCATCGGCCGCGGTGCGCGCGgtacgtac
cacgccctctgtctggtgctgtgccccaactcaccacctacttatctcta
catcggttcaaccgccacagTGATAGGATAGTCTCGCCGCTAGTTTTCCT
TATTCCTTGACGCGACTCTATTGCCCATCCGCCCTACGTCTTCACGTCCA
TCTGAGTATGATAAGTAGAAATTTGGACCTGGGGAGGACTATCGGGGAGC
TGGAAAGTAGAGATTCCTCCTCTTGAATATGGTTCTCAAGAACAAATGAT
AGTATTGAATGTCCATGAGCTCGTACCCTCACCTTTTCTCTCCCTCATTT
CCTTCCTTCCCTTTCCCTTCCCGACACTCAGGTCGATTAATTATCCTGCC
GAAGAAGAGCTGGCATGTCTGGAACCAAGATAACCGTGAGAAAGTGCTGC
GAGATGAGCGGCTGCACCGGGAGGAGCAAGATGAGCGGGCAGAGCAGCAA
CGGTACGTGAGAGTGAGACAGGGACGGTGGGAAGGAGAAGGAAGGGGATT
TTGTACTTCAAAACCCGCCAAGACCCGCGAGCGCCCTTTTTGCGGTATTT
GTCCACAGATCAGTACTTTCCCCCTTTCCTCTGCCATTATCACCAACATC
CTGCTTCGTCCCCTCATGTTAGGACTGTGGACCGCGAACACAGGCTGGAC
GTGTTGCGGAGACGGAAGCGGATGCGGGAAGAAAGGCTCGACCAGGAAGA
TGATGCATCAATAGTAGCGGCGGCAGCAGCAACAGCAACAGTGATGAAAG
CCGCCGTTGTTGTGGCAGAATCAGATTCAGCAGCGGCGTCAGGAAGGAAA
CAGCGGGCATTGAGTTTGAAGGATGAGGAGACTGTTGATGCCGTAGCAAA
GGGCGCAGCGCAAGGATTGGACAACAAAGGCCTAGCTATTCCCCCTGATA
AAGTGGGATATATTGAAGGGCAACAACATCAGGGCCATGTAAACCTCTTC
GGGCATTTCGCTGAGCAACTTGgtatgtgcatcttttgccgctgaacgat
tggggagtgcgtgtgatatggggactatcccagcttccccgtcatgcggg
gcgggcttattttggtgctcaaaatatgatagatggagatgtctttatgc
cggtgacaaggcttgttatagtgattaaaaccccaaaaaagtaaaaagag
caaaaaacttacataactttctgtatagtccgtttagcacacgtccctct
actatagacgctcttgaccctaataccatttgtcactcacacaatataca
gACAGAAAGGTGTGCAACAAGTATTACGCTCAAGAGCAGGCTGAAAAGGA
GCTATGGAAGAAGCGTGCCGAAGGTATAGCTCCCTGGGGTTTCGACGACG
TAAAGGCGCCAAAACAATGGTATGAGAAAGGCTCCTCATCGTCATCATCG
ACCCCAAATCCAACCCCCAATTCGGCGTCTGCTGCTGCTTGCAATCTCTC
GTCATCCACTGCTGCTGCAGCTAGGCGTGACGGCAAATGTGTTCCGGAAG
AGAAGGCACAACGGATGCAACGGCGGGCGGAGCGCGAGAGGGAGCTGGCG
GACCCCATGACTGTCTTCATTGGCAGCGCAGTTGCAAATACTGCCAGCGG
CAGTGCCTCCACAGGACGTATCTCTCGCTTTAATCCGGCTTATGTTGCTC
CTCCTCCAGTCACCAGTCATCATCATTCGTCCCCAATATCTTCGTCTTTA
TCCCTATCCTCCTCCGACCACGACGGTAGGCACAGTCGGCGGCGACAATC
TCGCGAAATGAGAAAGAAAAAGGAGAGGCGACCCAAAAGGGAGAAGGCGA
AGAGGGAGGAGAAGAAGAAGGAGAAGAAGAAGGGGGAAAAGGGCCGCAGT
CGTAAAAAGTGGAAGGACAGCAATCGGAAAAGAGACAGGGCCTCACTGTC
TTTTTCCCCGTCCGCGGCTGATTCATGTCGTAAGGATACCAAGCCATCCC
CTTCTTCCCCTTTTTCGGCTAGTCTTGGGGCCCTTCGCCAACGCCGGTTG
GAGCGAGAACAAAATGAGCACCGCAAAGCTGTGCATCTGCTCGCAGCACG
CCAACGAGCTGGTCTTTCTTATCCTACTGACGCATCTCCCATGCTTGATC
AATCTGAGAAAGTGGAAATGGATGATAGAAAACGCGACTACAATAGCCGC
TTCTTTCCCTCTCGATGAATATAAGCCTGACCAAAAAAGGAAGAAAGTTG
CCTGTATCCATGAAGAAAATTTATACGTTGGAACGACGAAATCATCGTTA
ATGAGGA
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protein sequence of NO23G00840.5

>NO23G00840.5-protein ID=NO23G00840.5-protein|Name=NO23G00840.5|organism=Nannochloropsis oceanica|type=polypeptide|length=406bp
MREERLDQEDDASIVAAAAATATVMKAAVVVAESDSAAASGRKQRALSLK
DEETVDAVAKGAAQGLDNKGLAIPPDKVGYIEGQQHQGHVNLFGHFAEQL
DRKVCNKYYAQEQAEKELWKKRAEGIAPWGFDDVKAPKQWYEKGSSSSSS
TPNPTPNSASAAACNLSSSTAAAARRDGKCVPEEKAQRMQRRAERERELA
DPMTVFIGSAVANTASGSASTGRISRFNPAYVAPPPVTSHHHSSPISSSL
SLSSSDHDGRHSRRRQSREMRKKKERRPKREKAKREEKKKEKKKGEKGRS
RKKWKDSNRKRDRASLSFSPSAADSCRKDTKPSPSSPFSASLGALRQRRL
EREQNEHRKAVHLLAARQRAGLSYPTDASPMLDQSEKVEMDDRKRDYNSR
FFPSR*
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protein sequence of NO23G00840.4

>NO23G00840.4-protein ID=NO23G00840.4-protein|Name=NO23G00840.4|organism=Nannochloropsis oceanica|type=polypeptide|length=487bp
MSMSSYPHLFSPSFPSFPFPSRHSGRLIILPKKSWHVWNQDNREKVLRDE
RLHREEQDERAEQQRTVDREHRLDVLRRRKRMREERLDQEDDASIVAAAA
ATATVMKAAVVVAESDSAAASGRKQRALSLKDEETVDAVAKGAAQGLDNK
GLAIPPDKVGYIEGQQHQGHVNLFGHFAEQLDRKVCNKYYAQEQAEKELW
KKRAEGIAPWGFDDVKAPKQWYEKGSSSSSSTPNPTPNSASAAACNLSSS
TAAAARRDGKCVPEEKAQRMQRRAERERELADPMTVFIGSAVANTASGSA
STGRISRFNPAYVAPPPVTSHHHSSPISSSLSLSSSDHDGRHSRRRQSRE
MRKKKERRPKREKAKREEKKKEKKKGEKGRSRKKWKDSNRKRDRASLSFS
PSAADSCRKDTKPSPSSPFSASLGALRQRRLEREQNEHRKAVHLLAARQR
AGLSYPTDASPMLDQSEKVEMDDRKRDYNSRFFPSR*
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protein sequence of NO23G00840.3

>NO23G00840.3-protein ID=NO23G00840.3-protein|Name=NO23G00840.3|organism=Nannochloropsis oceanica|type=polypeptide|length=487bp
MSMSSYPHLFSPSFPSFPFPSRHSGRLIILPKKSWHVWNQDNREKVLRDE
RLHREEQDERAEQQRTVDREHRLDVLRRRKRMREERLDQEDDASIVAAAA
ATATVMKAAVVVAESDSAAASGRKQRALSLKDEETVDAVAKGAAQGLDNK
GLAIPPDKVGYIEGQQHQGHVNLFGHFAEQLDRKVCNKYYAQEQAEKELW
KKRAEGIAPWGFDDVKAPKQWYEKGSSSSSSTPNPTPNSASAAACNLSSS
TAAAARRDGKCVPEEKAQRMQRRAERERELADPMTVFIGSAVANTASGSA
STGRISRFNPAYVAPPPVTSHHHSSPISSSLSLSSSDHDGRHSRRRQSRE
MRKKKERRPKREKAKREEKKKEKKKGEKGRSRKKWKDSNRKRDRASLSFS
PSAADSCRKDTKPSPSSPFSASLGALRQRRLEREQNEHRKAVHLLAARQR
AGLSYPTDASPMLDQSEKVEMDDRKRDYNSRFFPSR*
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protein sequence of NO23G00840.2

>NO23G00840.2-protein ID=NO23G00840.2-protein|Name=NO23G00840.2|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MSGRLIILPKKSWHVWNQDNREKVLRDERLHREEQDERAEQQRTVDREHR
LDVLRRRKRMREERLDQEDDASIVAAAAATATVMKAAVVVAESDSAAASG
RKQRALSLKDEETVDAVAKGAAQGLDNKGLAIPPDKVGYIEGQQHQGHVN
LFGHFAEQLDRKVCNKYYAQEQAEKELWKKRAEGIAPWGFDDVKAPKQWY
EKGSSSSSSTPNPTPNSASAAACNLSSSTAAAARRDGKCVPEEKAQRMQR
RAERERELADPMTVFIGSAVANTASGSASTGRISRFNPAYVAPPPVTSHH
HSSPISSSLSLSSSDHDGRHSRRRQSREMRKKKERRPKREKAKREEKKKE
KKKGEKGRSRKKWKDSNRKRDRASLSFSPSAADSCRKDTKPSPSSPFSAS
LGALRQRRLEREQNEHRKAVHLLAARQRAGLSYPTDASPMLDQSEKVEMD
DRKRDYNSRFFPSR*
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protein sequence of NO23G00840.1

>NO23G00840.1-protein ID=NO23G00840.1-protein|Name=NO23G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MSGRLIILPKKSWHVWNQDNREKVLRDERLHREEQDERAEQQRTVDREHR
LDVLRRRKRMREERLDQEDDASIVAAAAATATVMKAAVVVAESDSAAASG
RKQRALSLKDEETVDAVAKGAAQGLDNKGLAIPPDKVGYIEGQQHQGHVN
LFGHFAEQLDRKVCNKYYAQEQAEKELWKKRAEGIAPWGFDDVKAPKQWY
EKGSSSSSSTPNPTPNSASAAACNLSSSTAAAARRDGKCVPEEKAQRMQR
RAERERELADPMTVFIGSAVANTASGSASTGRISRFNPAYVAPPPVTSHH
HSSPISSSLSLSSSDHDGRHSRRRQSREMRKKKERRPKREKAKREEKKKE
KKKGEKGRSRKKWKDSNRKRDRASLSFSPSAADSCRKDTKPSPSSPFSAS
LGALRQRRLEREQNEHRKAVHLLAARQRAGLSYPTDASPMLDQSEKVEMD
DRKRDYNSRFFPSR*
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Synonyms
Publications