|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr23 | genome | chr23:312214..316520 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO23G00840.5 ID=NO23G00840.5|Name=NO23G00840.5|organism=Nannochloropsis oceanica|type=mRNA|length=3950bp
CCAGTACTGCAACGAGAGAGAAGCATCGCTTGGAGAAACGAACTTGAGTT
TTTGATTTTCAAAGCTTTGACTTGACGTTGTCTTGCTTCTTGTAAGTATA
TTTCCTCGGGGATAGTTTTAAAGGGAGCATGCAGAAGCCGTATGAAACTG
TACAATAGAGTCTATCAACATACTCATGGGCGCGTTCAAGTCTTGTGTAC
TTGAGACATTTCGGGGCCTCTCTCTCTGACCGCCTGCAACCGCCCGGGAG
CCGTTGGACAAAACATGGGGGCGTCGCACGCCACGGAGGCAGTATAGCGG
ATCATACCCTGGGATACAAAAATAAGTATGAATATGGTGGTGTATGGAGG
AGCAATTCTTAATTGTGAACAGGAACCTAAGTGACAAGAGTATCGATATA
GTACTTGTTTGGAAACAATCTGCATACGTACTCGCTTGCTATGTATAAGA
TATGCCTGGGCGAATATACCTCGACCTCATCTAATCACTTTTTGGAGAAG
TATTTTGAAAAAGTAAAAGCATTTCTAAATGGCCAGTATGATTGATCAAG
TACGACTTTATGTCAATAGTCGGTCATCAGTTATAGTTATGCGTGACTTC
TCTCGAGCAACAACTAGTGGTCGTGCAATCGTGCATATTAGATTCCCTTT
GAGCAACATCTATGAATATGCTGCTAAACTTACAAAGGAAAATATGGTTT
TTAATTGGTCTGGAACGGCTGGTGGCAAAGGGGAAGGGCAGTTGACAACG
CCGAGGCCGGGGAAGAAGACCTTTAGGCTACAGACATTACGGTTTGAATG
ATATAATAAGTAATGACAGTGGTTACGACGGTGATCATGACATGGTGAGA
GAATGAAGGGGGAAAGGGAGGGACTGAAGGAGGGATGTGTTTTGGTTCGG
CGTTTGACAAAGAGTGTGTGGTGGAATTTTATTCCATTTTCGTATCAATA
GTTATATATATATATTGTGGAAAGAGCAGTGAGAATAATCAGAAAGAGGG
ACATTATAGGTACATGATTTAATCACTGTTTAATTGGTCATCAATGACAT
CATTGGGGGCTGGTATGGTGGTGTAGATGTTAAAAAAAATGAACATTTTT
AATTGCTGTGCGACTGTGGTATATATATATGTCTGCCCACGTGATTCAAG
TAGGACCGTTTTTGTGAAAATTATCATTCCTCCGTGATGAATTTACCGTT
GGAGTAATGTTAATATGCGATGGGCTTCCTGGCTGATCCTGGTGCTAATC
TGTCCTGCGGGAAAATTAGTTCTGCCTGTTTTCAAGACGGACACATATAG
CTGTAAGTAATCGTGGCAGTCGTCCAAAAGGTGATTCGTTGTGGTGAAGG
AAGAAGGAAGAGGAAAAGAAGGTTTTCAATTTGCACATTCAGATGACCAA
GCAGGATTATCCTGCCGGCTCGAAGCATAGAACGAGCTAGTATTGTAAAG
AGATGTTGTAAAATAAGGAATCGCGCAAGGGCAGCAGGCACAGAGAGGTT
GGAGGAAAGATATGAGAAAGCATCGCGAAAATCAACCTGCTTGCCCTTTA
CGAAGTGTAGGCGATGTCAGATCTCACCAATAACGAAAGAATCCTCGTTC
TCCCTACCAAGTCTGCCTCTCATGTCGATGCTCCCATACGAGGCTGCCTT
AAGCACATTGGGCGGGTAAACGAGGAGACATCAAATAAGGGACGCGCCAA
CGCCTTGACTACGGCCTCAACTTAAATGCTCTCTCCTGAATTATTTGCTA
TGTTGATAAGGGGTGCGCGAGACGTTATTTGTAAGGCCGCATGGTTGTAT
GTGCATGGGTCCGAGGGACAAGTGCTGGGGGGGTAACGAGCGTCCTCTGC
CTCCTACCGAGGGAATACCCGATTTATCTCACAACATGCACATTAAAACA
TGTATAATTACACGTCGACATAACTCACGGAAACAAGACTGCGGCGGTGC
CAACAGTCAGCGGCCTGCAATGGCACTGTCTTGACACTCCCCGTCGTCTA
CCTCATCCATCATCACAGGGGGCATCGGCCGCGGTGCGCGCGTGATAGGA
TAGTCTCGCCGCTAGTTTTCCTTATTCCTTGACGCGACTCTATTGCCCAT
CCGCCCTACGTCTTCACGTCCATCTGAGTATGATAAGTAGAAATTTGGAC
CTGGGGAGGACTATCGGGGAGCTGGAAAGTAGAGATTCCTCCTCTTGAAT
ATGGTTCTCAAGAACAAATGATAGTATTGAATGTCCATGAGCTCGTACCC
TCACCTTTTCTCTCCCTCATTTCCTTCCTTCCCTTTCCCTTCCCGACACT
CAGGTCGATTAATTATCCTGCCGAAGAAGAGCTGGCATGTCTGGAACCAA
GATAACCGTGAGAAAGTGCTGCGAGATGAGCGGCTGCACCGGGAGGAGCA
AGATGAGCGGGCAGAGCAGCAACGGTACGTGAGAGTGAGACAGGGACGGT
GGGAAGGAGAAGGAAGGGGATTTTGTACTTCAAAACCCGCCAAGACCCGC
GAGCGCCCTTTTTGCGGTATTTGTCCACAGATCAGTACTTTCCCCCTTTC
CTCTGCCATTATCACCAACATCCTGCTTCGTCCCCTCATGTTAGGACTGT
GGACCGCGAACACAGGCTGGACGTGTTGCGGAGACGGAAGCGGATGCGGG
AAGAAAGGCTCGACCAGGAAGATGATGCATCAATAGTAGCGGCGGCAGCA
GCAACAGCAACAGTGATGAAAGCCGCCGTTGTTGTGGCAGAATCAGATTC
AGCAGCGGCGTCAGGAAGGAAACAGCGGGCATTGAGTTTGAAGGATGAGG
AGACTGTTGATGCCGTAGCAAAGGGCGCAGCGCAAGGATTGGACAACAAA
GGCCTAGCTATTCCCCCTGATAAAGTGGGATATATTGAAGGGCAACAACA
TCAGGGCCATGTAAACCTCTTCGGGCATTTCGCTGAGCAACTTGACAGAA
AGGTGTGCAACAAGTATTACGCTCAAGAGCAGGCTGAAAAGGAGCTATGG
AAGAAGCGTGCCGAAGGTATAGCTCCCTGGGGTTTCGACGACGTAAAGGC
GCCAAAACAATGGTATGAGAAAGGCTCCTCATCGTCATCATCGACCCCAA
ATCCAACCCCCAATTCGGCGTCTGCTGCTGCTTGCAATCTCTCGTCATCC
ACTGCTGCTGCAGCTAGGCGTGACGGCAAATGTGTTCCGGAAGAGAAGGC
ACAACGGATGCAACGGCGGGCGGAGCGCGAGAGGGAGCTGGCGGACCCCA
TGACTGTCTTCATTGGCAGCGCAGTTGCAAATACTGCCAGCGGCAGTGCC
TCCACAGGACGTATCTCTCGCTTTAATCCGGCTTATGTTGCTCCTCCTCC
AGTCACCAGTCATCATCATTCGTCCCCAATATCTTCGTCTTTATCCCTAT
CCTCCTCCGACCACGACGGTAGGCACAGTCGGCGGCGACAATCTCGCGAA
ATGAGAAAGAAAAAGGAGAGGCGACCCAAAAGGGAGAAGGCGAAGAGGGA
GGAGAAGAAGAAGGAGAAGAAGAAGGGGGAAAAGGGCCGCAGTCGTAAAA
AGTGGAAGGACAGCAATCGGAAAAGAGACAGGGCCTCACTGTCTTTTTCC
CCGTCCGCGGCTGATTCATGTCGTAAGGATACCAAGCCATCCCCTTCTTC
CCCTTTTTCGGCTAGTCTTGGGGCCCTTCGCCAACGCCGGTTGGAGCGAG
AACAAAATGAGCACCGCAAAGCTGTGCATCTGCTCGCAGCACGCCAACGA
GCTGGTCTTTCTTATCCTACTGACGCATCTCCCATGCTTGATCAATCTGA
GAAAGTGGAAATGGATGATAGAAAACGCGACTACAATAGCCGCTTCTTTC
CCTCTCGATGAATATAAGCCTGACCAAAAAAGGAAGAAAGTTGCCTGTAT
CCATGAAGAAAATTTATACGTTGGAACGACGAAATCATCGTTAATGAGGA back to topprotein sequence of NO23G00840.5 >NO23G00840.5-protein ID=NO23G00840.5-protein|Name=NO23G00840.5|organism=Nannochloropsis oceanica|type=polypeptide|length=406bp
MREERLDQEDDASIVAAAAATATVMKAAVVVAESDSAAASGRKQRALSLK
DEETVDAVAKGAAQGLDNKGLAIPPDKVGYIEGQQHQGHVNLFGHFAEQL
DRKVCNKYYAQEQAEKELWKKRAEGIAPWGFDDVKAPKQWYEKGSSSSSS
TPNPTPNSASAAACNLSSSTAAAARRDGKCVPEEKAQRMQRRAERERELA
DPMTVFIGSAVANTASGSASTGRISRFNPAYVAPPPVTSHHHSSPISSSL
SLSSSDHDGRHSRRRQSREMRKKKERRPKREKAKREEKKKEKKKGEKGRS
RKKWKDSNRKRDRASLSFSPSAADSCRKDTKPSPSSPFSASLGALRQRRL
EREQNEHRKAVHLLAARQRAGLSYPTDASPMLDQSEKVEMDDRKRDYNSR
FFPSR* back to topmRNA from alignment at chr23:312214..316520- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO23G00840.5 ID=NO23G00840.5|Name=NO23G00840.5|organism=Nannochloropsis oceanica|type=mRNA|length=4307bp|location=Sequence derived from alignment at chr23:312214..316520- (Nannochloropsis oceanica)
CCAGTACTGCAACGAGAGAGAAGCATCGCTTGGAGAAACGAACTTGAGTT
TTTGATTTTCAAAGCTTTGACTTGACGTTGTCTTGCTTCTTGTAAGTATA
TTTCCTCGGGGATAGTTTTAAAGGGAGCATGCAGAAGCCGTATGAAACTG
TACAATAGAGTCTATCAACATACTCATGGGCGCGTTCAAGTCTTGTGTAC
TTGAGACATTTCGGGGCCTCTCTCTCTGACCGCCTGCAACCGCCCGGGAG
CCGTTGGACAAAACATGGGGGCGTCGCACGCCACGGAGGCAGTATAGCGG
ATCATACCCTGGGATACAAAAATAAGTATGAATATGGTGGTGTATGGAGG
AGCAATTCTTAATTGTGAACAGGAACCTAAGTGACAAGAGTATCGATATA
GTACTTGTTTGGAAACAATCTGCATACGTACTCGCTTGCTATGTATAAGA
TATGCCTGGGCGAATATACCTCGACCTCATCTAATCACTTTTTGGAGAAG
TATTTTGAAAAAGTAAAAGCATTTCTAAATGGCCAGTATGATTGATCAAG
TACGACTTTATGTCAATAGTCGGTCATCAGTTATAGTTATGCGTGACTTC
TCTCGAGCAACAACTAGTGGTCGTGCAATCGTGCATATTAGATTCCCTTT
GAGCAACATCTATGAATATGCTGCTAAACTTACAAAGGAAAATATGGTTT
TTAATTGGTCTGGAACGGCTGGTGGCAAAGGGGAAGGGCAGTTGACAACG
CCGAGGCCGGGGAAGAAGACCTTTAGGCTACAGACATTACGGTTTGAATG
ATATAATAAGTAATGACAGTGGTTACGACGGTGATCATGACATGGTGAGA
GAATGAAGGGGGAAAGGGAGGGACTGAAGGAGGGATGTGTTTTGGTTCGG
CGTTTGACAAAGAGTGTGTGGTGGAATTTTATTCCATTTTCGTATCAATA
GTTATATATATATATTGTGGAAAGAGCAGTGAGAATAATCAGAAAGAGGG
ACATTATAGGTACATGATTTAATCACTGTTTAATTGGTCATCAATGACAT
CATTGGGGGCTGGTATGGTGGTGTAGATGTTAAAAAAAATGAACATTTTT
AATTGCTGTGCGACTGTGGTATATATATATGTCTGCCCACGTGATTCAAG
TAGGACCGTTTTTGTGAAAATTATCATTCCTCCGTGATGAATTTACCGTT
GGAGTAATGTTAATATGCGATGGGCTTCCTGGCTGATCCTGGTGCTAATC
TGTCCTGCGGGAAAATTAGTTCTGCCTGTTTTCAAGACGGACACATATAG
CTGTAAGTAATCGTGGCAGTCGTCCAAAAGGTGATTCGTTGTGGTGAAGG
AAGAAGGAAGAGGAAAAGAAGGTTTTCAATTTGCACATTCAGATGACCAA
GCAGGATTATCCTGCCGGCTCGAAGCATAGAACGAGCTAGTATTGTAAAG
AGATGTTGTAAAATAAGGAATCGCGCAAGGGCAGCAGGCACAGAGAGGTT
GGAGGAAAGATATGAGAAAGCATCGCGAAAATCAACCTGCTTGCCCTTTA
CGAAGTGTAGGCGATGTCAGATCTCACCAATAACGAAAGAATCCTCGTTC
TCCCTACCAAGTCTGCCTCTCATGTCGATGCTCCCATACGAGGCTGCCTT
AAGCACATTGGGCGGGTAAACGAGGAGACATCAAATAAGGGACGCGCCAA
CGCCTTGACTACGGCCTCAACTTAAATGCTCTCTCCTGAATTATTTGCTA
TGTTGATAAGGGGTGCGCGAGACGTTATTTGTAAGGCCGCATGGTTGTAT
GTGCATGGGTCCGAGGGACAAGTGCTGGGGGGGTAACGAGCGTCCTCTGC
CTCCTACCGAGGGAATACCCGATTTATCTCACAACATGCACATTAAAACA
TGTATAATTACACGTCGACATAACTCACGGAAACAAGACTGCGGCGGTGC
CAACAGTCAGCGGCCTGCAATGGCACTGTCTTGACACTCCCCGTCGTCTA
CCTCATCCATCATCACAGGGGGCATCGGCCGCGGTGCGCGCGGTACGTAC
CACGCCCTCTGTCTGGTGCTGTGCCCCAACTCACCACCTACTTATCTCTA
CATCGGTTCAACCGCCACAGTGATAGGATAGTCTCGCCGCTAGTTTTCCT
TATTCCTTGACGCGACTCTATTGCCCATCCGCCCTACGTCTTCACGTCCA
TCTGAGTATGATAAGTAGAAATTTGGACCTGGGGAGGACTATCGGGGAGC
TGGAAAGTAGAGATTCCTCCTCTTGAATATGGTTCTCAAGAACAAATGAT
AGTATTGAATGTCCATGAGCTCGTACCCTCACCTTTTCTCTCCCTCATTT
CCTTCCTTCCCTTTCCCTTCCCGACACTCAGGTCGATTAATTATCCTGCC
GAAGAAGAGCTGGCATGTCTGGAACCAAGATAACCGTGAGAAAGTGCTGC
GAGATGAGCGGCTGCACCGGGAGGAGCAAGATGAGCGGGCAGAGCAGCAA
CGGTACGTGAGAGTGAGACAGGGACGGTGGGAAGGAGAAGGAAGGGGATT
TTGTACTTCAAAACCCGCCAAGACCCGCGAGCGCCCTTTTTGCGGTATTT
GTCCACAGATCAGTACTTTCCCCCTTTCCTCTGCCATTATCACCAACATC
CTGCTTCGTCCCCTCATGTTAGGACTGTGGACCGCGAACACAGGCTGGAC
GTGTTGCGGAGACGGAAGCGGATGCGGGAAGAAAGGCTCGACCAGGAAGA
TGATGCATCAATAGTAGCGGCGGCAGCAGCAACAGCAACAGTGATGAAAG
CCGCCGTTGTTGTGGCAGAATCAGATTCAGCAGCGGCGTCAGGAAGGAAA
CAGCGGGCATTGAGTTTGAAGGATGAGGAGACTGTTGATGCCGTAGCAAA
GGGCGCAGCGCAAGGATTGGACAACAAAGGCCTAGCTATTCCCCCTGATA
AAGTGGGATATATTGAAGGGCAACAACATCAGGGCCATGTAAACCTCTTC
GGGCATTTCGCTGAGCAACTTGGTATGTGCATCTTTTGCCGCTGAACGAT
TGGGGAGTGCGTGTGATATGGGGACTATCCCAGCTTCCCCGTCATGCGGG
GCGGGCTTATTTTGGTGCTCAAAATATGATAGATGGAGATGTCTTTATGC
CGGTGACAAGGCTTGTTATAGTGATTAAAACCCCAAAAAAGTAAAAAGAG
CAAAAAACTTACATAACTTTCTGTATAGTCCGTTTAGCACACGTCCCTCT
ACTATAGACGCTCTTGACCCTAATACCATTTGTCACTCACACAATATACA
GACAGAAAGGTGTGCAACAAGTATTACGCTCAAGAGCAGGCTGAAAAGGA
GCTATGGAAGAAGCGTGCCGAAGGTATAGCTCCCTGGGGTTTCGACGACG
TAAAGGCGCCAAAACAATGGTATGAGAAAGGCTCCTCATCGTCATCATCG
ACCCCAAATCCAACCCCCAATTCGGCGTCTGCTGCTGCTTGCAATCTCTC
GTCATCCACTGCTGCTGCAGCTAGGCGTGACGGCAAATGTGTTCCGGAAG
AGAAGGCACAACGGATGCAACGGCGGGCGGAGCGCGAGAGGGAGCTGGCG
GACCCCATGACTGTCTTCATTGGCAGCGCAGTTGCAAATACTGCCAGCGG
CAGTGCCTCCACAGGACGTATCTCTCGCTTTAATCCGGCTTATGTTGCTC
CTCCTCCAGTCACCAGTCATCATCATTCGTCCCCAATATCTTCGTCTTTA
TCCCTATCCTCCTCCGACCACGACGGTAGGCACAGTCGGCGGCGACAATC
TCGCGAAATGAGAAAGAAAAAGGAGAGGCGACCCAAAAGGGAGAAGGCGA
AGAGGGAGGAGAAGAAGAAGGAGAAGAAGAAGGGGGAAAAGGGCCGCAGT
CGTAAAAAGTGGAAGGACAGCAATCGGAAAAGAGACAGGGCCTCACTGTC
TTTTTCCCCGTCCGCGGCTGATTCATGTCGTAAGGATACCAAGCCATCCC
CTTCTTCCCCTTTTTCGGCTAGTCTTGGGGCCCTTCGCCAACGCCGGTTG
GAGCGAGAACAAAATGAGCACCGCAAAGCTGTGCATCTGCTCGCAGCACG
CCAACGAGCTGGTCTTTCTTATCCTACTGACGCATCTCCCATGCTTGATC
AATCTGAGAAAGTGGAAATGGATGATAGAAAACGCGACTACAATAGCCGC
TTCTTTCCCTCTCGATGAATATAAGCCTGACCAAAAAAGGAAGAAAGTTG
CCTGTATCCATGAAGAAAATTTATACGTTGGAACGACGAAATCATCGTTA
ATGAGGA back to topCoding sequence (CDS) from alignment at chr23:312214..316520- >NO23G00840.5 ID=NO23G00840.5|Name=NO23G00840.5|organism=Nannochloropsis oceanica|type=CDS|length=1218bp|location=Sequence derived from alignment at chr23:312214..316520- (Nannochloropsis oceanica)
ATGCGGGAAGAAAGGCTCGACCAGGAAGATGATGCATCAATAGTAGCGGC
GGCAGCAGCAACAGCAACAGTGATGAAAGCCGCCGTTGTTGTGGCAGAAT
CAGATTCAGCAGCGGCGTCAGGAAGGAAACAGCGGGCATTGAGTTTGAAG
GATGAGGAGACTGTTGATGCCGTAGCAAAGGGCGCAGCGCAAGGATTGGA
CAACAAAGGCCTAGCTATTCCCCCTGATAAAGTGGGATATATTGAAGGGC
AACAACATCAGGGCCATGTAAACCTCTTCGGGCATTTCGCTGAGCAACTT
GACAGAAAGGTGTGCAACAAGTATTACGCTCAAGAGCAGGCTGAAAAGGA
GCTATGGAAGAAGCGTGCCGAAGGTATAGCTCCCTGGGGTTTCGACGACG
TAAAGGCGCCAAAACAATGGTATGAGAAAGGCTCCTCATCGTCATCATCG
ACCCCAAATCCAACCCCCAATTCGGCGTCTGCTGCTGCTTGCAATCTCTC
GTCATCCACTGCTGCTGCAGCTAGGCGTGACGGCAAATGTGTTCCGGAAG
AGAAGGCACAACGGATGCAACGGCGGGCGGAGCGCGAGAGGGAGCTGGCG
GACCCCATGACTGTCTTCATTGGCAGCGCAGTTGCAAATACTGCCAGCGG
CAGTGCCTCCACAGGACGTATCTCTCGCTTTAATCCGGCTTATGTTGCTC
CTCCTCCAGTCACCAGTCATCATCATTCGTCCCCAATATCTTCGTCTTTA
TCCCTATCCTCCTCCGACCACGACGGTAGGCACAGTCGGCGGCGACAATC
TCGCGAAATGAGAAAGAAAAAGGAGAGGCGACCCAAAAGGGAGAAGGCGA
AGAGGGAGGAGAAGAAGAAGGAGAAGAAGAAGGGGGAAAAGGGCCGCAGT
CGTAAAAAGTGGAAGGACAGCAATCGGAAAAGAGACAGGGCCTCACTGTC
TTTTTCCCCGTCCGCGGCTGATTCATGTCGTAAGGATACCAAGCCATCCC
CTTCTTCCCCTTTTTCGGCTAGTCTTGGGGCCCTTCGCCAACGCCGGTTG
GAGCGAGAACAAAATGAGCACCGCAAAGCTGTGCATCTGCTCGCAGCACG
CCAACGAGCTGGTCTTTCTTATCCTACTGACGCATCTCCCATGCTTGATC
AATCTGAGAAAGTGGAAATGGATGATAGAAAACGCGACTACAATAGCCGC
TTCTTTCCCTCTCGATGA back to top
|