NO23G00620, NO23G00620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 305.8 bits (782), Expect = 1.500e-79 Identity = 154/286 (53.85%), Postives = 193/286 (67.48%), Query Frame = 0 Query: 26 RGNEFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVAAGKGKKKTK 312 RG+ F Q+FQ PA+ P YM+WEK Y++ V+ ++ W+P + +Y++ IFG AL K N + +A WN L+ FS +G +RVVPH +L G V CGAPEPLYG+ AVGFW+QAF+LSK+AEL+DT F+VLR+K FLHWYHHVTVLLFTWF Y++ENPGIIF+AMNYSVHA+MY YY+L V+ P W ITL QI+QM+VGV A Y + +G CAV DLL AC +MYSTYLYLFCEFAVRR+ILG G K K Sbjct: 37 RGSTFTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMK--NRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKAGVSKMK 320
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 259.6 bits (662), Expect = 1.200e-65 Identity = 148/327 (45.26%), Postives = 193/327 (59.02%), Query Frame = 0 Query: 5 FFEVLGMYVPSENYTERFYTVRGNEFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIF---GYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPL-YGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFV---AYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVAA--------------GKGKKKT 311 F + +Y S+ T V+ F QVFQ PAL P Y +WEK+++ F I D+ W+P ++ +YL F+ Y K+ G ++ A WN LA FS GA+RVVPHF FL F+E +C AP+ YGDGA G W+ F +SKV EL+DTV +VL+ KDP+FLHWYHHVTVLL+TWF+YS NPG+ FIAMNY+VHAVMY+YY+L ++ P W ITL QI+QM+VGV V AY+Y + SCAV DL+ CA MY+TYLY F EF V R++ R + G+ KKKT Sbjct: 4 FLDPAPLYETSQYITRD--PVKPVRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSY----QADPSCAVVRDLIPWCAAMYATYLYFFVEFFVERFLAASTKRTPVSKLASKDIGAAPSNEGRDKKKT 324
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 243.4 bits (620), Expect = 9.100e-61 Identity = 128/298 (42.95%), Postives = 182/298 (61.07%), Query Frame = 0 Query: 12 YVPSENY--TERFYTVRGN--EFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVAAGK 306 Y P E T R YT R F Q +Q +P L Y +EKN+N +F F+ N W+ + SL +Y+ P + K+ + +S T +ACWN LA +S IGA+RVVPH + + F++ +C AP + GDGA G W+ F LSKVAEL+D++++ L+ + PIFLHWYHHV+VL FTW + +PG+ FIAMNY+VH+VMYTYY+L +K P W IT QIAQM+VGV ++ + S SCAV +L A++Y++YLYLF +F ++R+ + + RA GK Sbjct: 17 YCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLKNLS--TPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFV-KNARAGQEGK 311
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 241.9 bits (616), Expect = 2.700e-60 Identity = 128/257 (49.81%), Postives = 165/257 (64.20%), Query Frame = 0 Query: 30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIF---GYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPL-YGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLY 283 F QVFQ P L P YM+WEKN++ F I DN +P + +YL F+ Y +R G I+ A WN LA+FS +GA RVVPHF FL F+ +C AP+ YGDGA G W+ F +SK+ EL+DTV +VL+ KDP+FLHWYHHVTVLL+TWF+YS NPGI F+AMNYSVHA+MY+YY+L ++ P WF IT+AQI QM+VGV + + + S SCA+ L+ CA MY+TYLY Sbjct: 33 FVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAF-FFSRDPSCALVRGLIPWCAAMYATYLY 288
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 229.2 bits (583), Expect = 1.800e-56 Identity = 117/271 (43.17%), Postives = 171/271 (63.10%), Query Frame = 0 Query: 30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSW--IPWFSLCVY-LLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYS-NENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAY-NYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILG 296 F Q+FQ +P L+P Y ++EKN++A F N+W +P +Y L+ + G + R + +T +ACWN LL+ FS+ G +R VPH + + F++ +C P YG+GA G W+ F+ SKV EL+DTVF+V R+ FLHWYHH+TVLLF W +Y+ + G+ F+AMNYSVHAVMY YY+L +K P W P +IT+AQI+QM+VGV + ++Y + + C V +++ ALMY +YLYLFC+F VRR++ G Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNF-AQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEW---KTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRG 297
BLAST of NO23G00620 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.4 bits (581), Expect = 3.000e-56 Identity = 117/271 (43.17%), Postives = 171/271 (63.10%), Query Frame = 0 Query: 30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSW--IPWFSLCVY-LLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYS-NENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAY-NYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILG 296 F Q+FQ +P L+P Y ++EKN++A F N+W +P +Y L+ + G + R + +T +ACWN LL+ FS+ G +R VPH + + F++ +C P YG+GA G W+ F+ SKV EL+DTVF+V R+ FLHWYHH+TVLLF W +Y+ + G+ F+AMNYSVHAVMY YY+L +K P W P +IT+AQI+QM+VGV + ++Y + + C V +++ ALMY +YLYLFC+F VRR++ G Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNF-AQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEW---KTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRG 297
BLAST of NO23G00620 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 228.0 bits (580), Expect = 4.000e-56 Identity = 118/270 (43.70%), Postives = 167/270 (61.85%), Query Frame = 0 Query: 30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLC--VYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYS-NENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFV-AYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILG 296 F Q+FQ +P L PLY +EKN+ A F D + +LC L+ I G + R + +T +ACWN +L+ FS+ G +R VPH + + F++ +C P YG+GA G W+ F+ SKV EL+DTVF+V R+ FLHWYHH+TVLLF W +Y+ + G+ F+AMNYSVHA+MY YY+L + P W P +IT+AQI+QMIVGV + A ++Y + + C V ++A ALMY +YLYLFC+F VRR++ G Sbjct: 33 FTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEW---KTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRG 299
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 225.3 bits (573), Expect = 2.600e-55 Identity = 113/263 (42.97%), Postives = 157/263 (59.70%), Query Frame = 0 Query: 30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRY 293 F Q +Q FP P Y EK ++ + F+ N W+P S+ +Y + P + + + T +A WN LLA+FS +GA+R+VPH + L F+E +C PE + GDGA G W F LSK+ EL+DT+FV L+ + PIFLHWYHHVTVL FTW YS +PG+ FIAMNY+VHAVMY+YY+L +K P W IT QI QM+ GV + + +C V +L+ +++Y +YLYLF EF V+R+ Sbjct: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRP---VKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296
BLAST of NO23G00620 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.]) HSP 1 Score: 225.3 bits (573), Expect = 2.600e-55 Identity = 127/303 (41.91%), Postives = 179/303 (59.08%), Query Frame = 0 Query: 24 TVRGNEFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVG---FEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWF-PTWLITLAQIAQMIVGVFVA-----YNYYRVLSS---GGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYI---LGRGNRAVA-AGKGKKKT 311 T +G FH ++Q PAL+P Y +EK+++A F F+ ++W+P + +Y F + Y A R+ + +T + WN L+ S+ GA+RV H +LL G F + +C +PE Y D A G W F +SK+ EL+DT+FVVLR+K IFLHWYHH TVLL +WF + P + F+A+NYS+H VMY Y++L +K+VP WF P WL T+AQI+QM VG++V Y Y+ G CA+ ++ A LMYSTYL LF +F V+RY +G R VA GK K T Sbjct: 27 TAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCY-YGPKAMRHRKAF-DLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWL-TVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGKEDKAT 326
BLAST of NO23G00620 vs. NCBI_GenBank
Match: XP_013434038.1 (fatty acid elongation protein, putative [Eimeria necatrix] >CDJ65571.1 fatty acid elongation protein, putative [Eimeria necatrix]) HSP 1 Score: 204.5 bits (519), Expect = 4.700e-49 Identity = 126/286 (44.06%), Postives = 163/286 (56.99%), Query Frame = 0 Query: 37 FPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENP-GIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTW--LITLAQIAQMIVGV-------FVAYNY-YRVL---------SSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVA 303 FP L P Y +E ++A + I N ++ + C+YLLF + K N RT + WN LA FS++G +RVVP L+ GFE L P YG GA GFW F+ SK ELLDTVF++LR++ FLHWYHH TVLL+TW Y+ E P GI F+AMN+SVHAVMY YY+LA R P +W +T AQI+QM VGV + A+++ YR L + G +L WAC LMYSTY YLF E+ V+RY+ GRG+ A A Sbjct: 36 FPFLKPFYFSFETEFSAAAALSWNIANYYVAPLAACLYLLFCYCGTKYMK--NREPFDLRTPLKYWNLALAIFSFMGMVRVVPQLACLVCSYGFEASLASPPVYAYGHGAAGFWTLLFIYSKFFELLDTVFIILRKRPLSFLHWYHHATVLLYTWDAYTWEQPAGIYFVAMNFSVHAVMYFYYFLAAQLRRP---LSWGIFVTAAQISQMFVGVGVTFVSMYFAFSFPYRPLWRREQIRDALAHGHYITPKNLYWAC-LMYSTYFYLFAEYFVKRYVKGRGHAAKA 315 The following BLAST results are available for this feature:
BLAST of NO23G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00620 ID=NO23G00620|Name=NO23G00620|organism=Nannochloropsis oceanica|type=gene|length=1734bpback to top protein sequence of NO23G00620.1 >NO23G00620.1-protein ID=NO23G00620.1-protein|Name=NO23G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bpback to top Synonyms
Publications
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