NO23G00620, NO23G00620 (gene) Nannochloropsis oceanica

Overview
NameNO23G00620
Unique NameNO23G00620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1734
Alignment locationchr23:251478..253211 -

Link to JBrowse

Properties
Property NameValue
DescriptionElongation of fatty acids protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:251478..253211 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Homology
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana])

HSP 1 Score: 305.8 bits (782), Expect = 1.500e-79
Identity = 154/286 (53.85%), Postives = 193/286 (67.48%), Query Frame = 0
Query:   26 RGNEFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVAAGKGKKKTK 312
            RG+ F Q+FQ  PA+ P YM+WEK Y++  V+ ++    W+P   + +Y++ IFG  AL K  N      +  +A WN  L+ FS +G +RVVPH  +L    G   V CGAPEPLYG+ AVGFW+QAF+LSK+AEL+DT F+VLR+K   FLHWYHHVTVLLFTWF Y++ENPGIIF+AMNYSVHA+MY YY+L  V+  P W     ITL QI+QM+VGV  A  Y   + +G  CAV  DLL AC +MYSTYLYLFCEFAVRR+ILG          G  K K
Sbjct:   37 RGSTFTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMK--NRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKAGVSKMK 320          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana])

HSP 1 Score: 259.6 bits (662), Expect = 1.200e-65
Identity = 148/327 (45.26%), Postives = 193/327 (59.02%), Query Frame = 0
Query:    5 FFEVLGMYVPSENYTERFYTVRGNEFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIF---GYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPL-YGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFV---AYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVAA--------------GKGKKKT 311
            F +   +Y  S+  T     V+   F QVFQ  PAL P Y +WEK+++    F  I D+ W+P  ++ +YL F+     Y    K+   G ++     A WN  LA FS  GA+RVVPHF FL     F+E +C AP+   YGDGA G W+  F +SKV EL+DTV +VL+ KDP+FLHWYHHVTVLL+TWF+YS  NPG+ FIAMNY+VHAVMY+YY+L  ++  P W     ITL QI+QM+VGV V   AY+Y     +  SCAV  DL+  CA MY+TYLY F EF V R++     R   +              G+ KKKT
Sbjct:    4 FLDPAPLYETSQYITRD--PVKPVRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSY----QADPSCAVVRDLIPWCAAMYATYLYFFVEFFVERFLAASTKRTPVSKLASKDIGAAPSNEGRDKKKT 324          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana])

HSP 1 Score: 243.4 bits (620), Expect = 9.100e-61
Identity = 128/298 (42.95%), Postives = 182/298 (61.07%), Query Frame = 0
Query:   12 YVPSENY--TERFYTVRGN--EFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVAAGK 306
            Y P E    T R YT R     F Q +Q +P L   Y  +EKN+N   +F F+  N W+ + SL +Y+      P + K+  +  +S  T +ACWN  LA +S IGA+RVVPH  + +    F++ +C AP  + GDGA G W+  F LSKVAEL+D++++ L+ + PIFLHWYHHV+VL FTW  +   +PG+ FIAMNY+VH+VMYTYY+L  +K  P W     IT  QIAQM+VGV ++   +   S   SCAV   +L   A++Y++YLYLF +F ++R+ + +  RA   GK
Sbjct:   17 YCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLKNLS--TPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFV-KNARAGQEGK 311          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana])

HSP 1 Score: 241.9 bits (616), Expect = 2.700e-60
Identity = 128/257 (49.81%), Postives = 165/257 (64.20%), Query Frame = 0
Query:   30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIF---GYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPL-YGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLY 283
            F QVFQ  P L P YM+WEKN++    F  I DN  +P  +  +YL F+     Y    +R   G I+     A WN  LA+FS +GA RVVPHF FL     F+  +C AP+   YGDGA G W+  F +SK+ EL+DTV +VL+ KDP+FLHWYHHVTVLL+TWF+YS  NPGI F+AMNYSVHA+MY+YY+L  ++  P WF    IT+AQI QM+VGV +  + +   S   SCA+   L+  CA MY+TYLY
Sbjct:   33 FVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAF-FFSRDPSCALVRGLIPWCAAMYATYLY 288          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana])

HSP 1 Score: 229.2 bits (583), Expect = 1.800e-56
Identity = 117/271 (43.17%), Postives = 171/271 (63.10%), Query Frame = 0
Query:   30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSW--IPWFSLCVY-LLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYS-NENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAY-NYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILG 296
            F Q+FQ +P L+P Y ++EKN++A     F   N+W  +P     +Y L+ + G   +  R    +   +T +ACWN LL+ FS+ G +R VPH    +  + F++ +C  P   YG+GA G W+  F+ SKV EL+DTVF+V R+    FLHWYHH+TVLLF W +Y+   + G+ F+AMNYSVHAVMY YY+L  +K  P W P  +IT+AQI+QM+VGV +   ++Y + +    C V    +++ ALMY +YLYLFC+F VRR++ G
Sbjct:   31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNF-AQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEW---KTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRG 297          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 228.4 bits (581), Expect = 3.000e-56
Identity = 117/271 (43.17%), Postives = 171/271 (63.10%), Query Frame = 0
Query:   30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSW--IPWFSLCVY-LLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYS-NENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAY-NYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILG 296
            F Q+FQ +P L+P Y ++EKN++A     F   N+W  +P     +Y L+ + G   +  R    +   +T +ACWN LL+ FS+ G +R VPH    +  + F++ +C  P   YG+GA G W+  F+ SKV EL+DTVF+V R+    FLHWYHH+TVLLF W +Y+   + G+ F+AMNYSVHAVMY YY+L  +K  P W P  +IT+AQI+QM+VGV +   ++Y + +    C V    +++ ALMY +YLYLFC+F VRR++ G
Sbjct:   31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNF-AQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEW---KTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRG 297          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata])

HSP 1 Score: 228.0 bits (580), Expect = 4.000e-56
Identity = 118/270 (43.70%), Postives = 167/270 (61.85%), Query Frame = 0
Query:   30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLC--VYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYS-NENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFV-AYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILG 296
            F Q+FQ +P L PLY  +EKN+ A     F  D   +   +LC    L+ I G   +  R    +   +T +ACWN +L+ FS+ G +R VPH    +  + F++ +C  P   YG+GA G W+  F+ SKV EL+DTVF+V R+    FLHWYHH+TVLLF W +Y+   + G+ F+AMNYSVHA+MY YY+L  +   P W P  +IT+AQI+QMIVGV + A ++Y + +    C V    ++A ALMY +YLYLFC+F VRR++ G
Sbjct:   33 FTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEW---KTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRG 299          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana])

HSP 1 Score: 225.3 bits (573), Expect = 2.600e-55
Identity = 113/263 (42.97%), Postives = 157/263 (59.70%), Query Frame = 0
Query:   30 FHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVAYNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRY 293
            F Q +Q FP   P Y   EK ++    + F+  N W+P  S+ +Y   +   P +  +     +   T +A WN LLA+FS +GA+R+VPH  + L    F+E +C  PE + GDGA G W   F LSK+ EL+DT+FV L+ + PIFLHWYHHVTVL FTW  YS  +PG+ FIAMNY+VHAVMY+YY+L  +K  P W     IT  QI QM+ GV +    +       +C V   +L+  +++Y +YLYLF EF V+R+
Sbjct:   37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRP---VKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.])

HSP 1 Score: 225.3 bits (573), Expect = 2.600e-55
Identity = 127/303 (41.91%), Postives = 179/303 (59.08%), Query Frame = 0
Query:   24 TVRGNEFHQVFQGFPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVG---FEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPGIIFIAMNYSVHAVMYTYYWLAIVKRVPDWF-PTWLITLAQIAQMIVGVFVA-----YNYYRVLSS---GGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYI---LGRGNRAVA-AGKGKKKT 311
            T +G  FH ++Q  PAL+P Y  +EK+++A   F F+  ++W+P  +  +Y  F + Y   A R+   +   +T +  WN  L+  S+ GA+RV  H  +LL   G   F + +C +PE  Y D A G W   F +SK+ EL+DT+FVVLR+K  IFLHWYHH TVLL +WF +    P + F+A+NYS+H VMY Y++L  +K+VP WF P WL T+AQI+QM VG++V      Y Y+        G  CA+   ++ A  LMYSTYL LF +F V+RY      +G R VA  GK  K T
Sbjct:   27 TAQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCY-YGPKAMRHRKAF-DLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWL-TVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGKEDKAT 326          
BLAST of NO23G00620 vs. NCBI_GenBank
Match: XP_013434038.1 (fatty acid elongation protein, putative [Eimeria necatrix] >CDJ65571.1 fatty acid elongation protein, putative [Eimeria necatrix])

HSP 1 Score: 204.5 bits (519), Expect = 4.700e-49
Identity = 126/286 (44.06%), Postives = 163/286 (56.99%), Query Frame = 0
Query:   37 FPALAPLYMDWEKNYNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMACWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFWIQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENP-GIIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTW--LITLAQIAQMIVGV-------FVAYNY-YRVL---------SSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRAVA 303
            FP L P Y  +E  ++A     + I N ++   + C+YLLF +      K  N      RT +  WN  LA FS++G +RVVP    L+   GFE  L   P   YG GA GFW   F+ SK  ELLDTVF++LR++   FLHWYHH TVLL+TW  Y+ E P GI F+AMN+SVHAVMY YY+LA   R P    +W   +T AQI+QM VGV       + A+++ YR L          + G      +L WAC LMYSTY YLF E+ V+RY+ GRG+ A A
Sbjct:   36 FPFLKPFYFSFETEFSAAAALSWNIANYYVAPLAACLYLLFCYCGTKYMK--NREPFDLRTPLKYWNLALAIFSFMGMVRVVPQLACLVCSYGFEASLASPPVYAYGHGAAGFWTLLFIYSKFFELLDTVFIILRKRPLSFLHWYHHATVLLYTWDAYTWEQPAGIYFVAMNFSVHAVMYFYYFLAAQLRRP---LSWGIFVTAAQISQMFVGVGVTFVSMYFAFSFPYRPLWRREQIRDALAHGHYITPKNLYWAC-LMYSTYFYLFAEYFVKRYVKGRGHAAKA 315          
The following BLAST results are available for this feature:
BLAST of NO23G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28304.11.500e-7953.85fatty-acyl [Nannochloropsis gaditana][more]
EWM29833.11.200e-6545.26elongation of very long chain fatty acids protein ... [more]
EWM25754.19.100e-6142.95fatty-acyl elongase [Nannochloropsis gaditana][more]
EWM21810.12.700e-6049.81fatty-acyl elongase [Nannochloropsis gaditana][more]
EWM29442.11.800e-5643.17fatty-acyl [Nannochloropsis gaditana][more]
XP_005855601.13.000e-5643.17fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU... [more]
ACV21066.14.000e-5643.70fatty acid elongase [Nannochloropsis oculata][more]
EWM25755.12.600e-5542.97fatty-acyl elongase [Nannochloropsis gaditana][more]
ASU87515.12.600e-5541.91long-chain fatty acid elongase [Nannochloropsis sp... [more]
XP_013434038.14.700e-4944.06fatty acid elongation protein, putative [Eimeria n... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL034nonsL034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006311NSK006311Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00620.1NO23G00620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601925gene_8410Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00620.1NO23G00620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00620 ID=NO23G00620|Name=NO23G00620|organism=Nannochloropsis oceanica|type=gene|length=1734bp
ATGACAACGGCCTTCTTCGAGGTGCTGGGCATGTACGTGCCTTCCGAGAA
CTACACGGAGCGTTTTTACACGGTGCGCGGGAATGAGTTCCACCAAGTCT
TCCAAGGCTTCCCAGCCCTTGCCCCTTTATACATGGACTGGGAGAAGAAT
TACAATGCGGAGAAGGTCTTTTGGTTCATTATCGACAACTCGTGGATTCC
CTGGTTCTCGCTCTGCGTGTATTTGCTCTTCATCTTCGGCTACCCCGCCC
TGGCCAAACGCTACAATATCGGCTACATCTCCGCTCGGACACAGATGGCC
TGCTGGAATTTCTTGCTTGCTTCATTTAGTTGGATTGGAGCGATGCGGGT
GGTACCTCACTTTTTTTTCCTGCTCAAGGACGTGGGCTTTGAAGAGgtag
ggggggaaggagggagggaggggaaaaagggaaggaggacgataggtgga
tagagtactattttgcttctagtttggcagaaaggtcagacacttaaatc
cggaagacgaagaagcgataaaattcttttacaatgctaaattgtttgac
gtcttggtcattccttccctccttctccccttcctccctcctccgctcct
ccccagGTGTTGTGCGGGGCACCGGAGCCGCTGTATGGCGACGGTGCTGT
CGGATTCTGGATCCAGGCGTTTGTCTTGAGCAAGGTGGCCGAGCTGCTGG
ATACGGTCTTTGTGGTATTGCGGCAAAAAGACCCGATCTTCTTGCATTGg
tacgtgccctccttccctccctttcctccctctccccctccctctttcct
gcaccaacccacggcgtttgcttgtcgttgggttgcgggaaagtctgaga
atgtcctcacattggcatgtgggaggggggaaagagagaaaaagagaaag
agatcgacggagggagggaaactggaccggctaaaagggaccgggtaaag
ggggcggagaaacaccaaggagaggtctttctcactcattcgtccctgcc
tatcgacactccccccccgcattccctagGTACCACCATGTGACCGTGCT
GCTCTTCACCTGGTTCACGTACTCGAACGAGAACCCGGGGATCATCTTCA
TCGCCATGAACTACTCGGTGCACGCCGTCATGTACACCTACTACTGGCTC
GCCATCGTCAAGCGCGTCCCCGACTGGTTCCCCACATGGCTCATCACTCT
CGCGCAGATCGCACAGATGgtacgtctcccgctccctctctgcttctctc
cctccctttcctgctcccccacaccttatttgctcaatcgaagcgccctc
ctcaggcggtgccgtgccacggcaatgtcgaggacggtgtcagtggggcg
gtgttagtcatgtatagagctgtaggaataccttaatggcttccttgctc
ggtaggactaccccaagggctctgtttgtcgccttggacgcgacaggggc
tctggcctagtgacatgtgctcacccctccttccctctctccccccttcc
tccctctttccctccgtcgccgcctagATCGTGGGAGTGTTTGTCGCCTA
CAACTACTACCGCGTCTTGTCCTCGGGCGGCTCCTGCGCCGTCTCGACGG
ATCTGCTGTGGGCATGCGCGTTGATGTACTCGACGTACCTCTACTTGTTT
TGTGAGTTTGCTGTCCGCAGGTACATCCTGGGCAGGGGCAACCGGGCAGT
GGCGGCGGGGAAGGGCAAGAAGAAGACCAAGTAG
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protein sequence of NO23G00620.1

>NO23G00620.1-protein ID=NO23G00620.1-protein|Name=NO23G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bp
MTTAFFEVLGMYVPSENYTERFYTVRGNEFHQVFQGFPALAPLYMDWEKN
YNAEKVFWFIIDNSWIPWFSLCVYLLFIFGYPALAKRYNIGYISARTQMA
CWNFLLASFSWIGAMRVVPHFFFLLKDVGFEEVLCGAPEPLYGDGAVGFW
IQAFVLSKVAELLDTVFVVLRQKDPIFLHWYHHVTVLLFTWFTYSNENPG
IIFIAMNYSVHAVMYTYYWLAIVKRVPDWFPTWLITLAQIAQMIVGVFVA
YNYYRVLSSGGSCAVSTDLLWACALMYSTYLYLFCEFAVRRYILGRGNRA
VAAGKGKKKTK*
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Synonyms
Publications