NO23G00600, NO23G00600 (gene) Nannochloropsis oceanica

Overview
NameNO23G00600
Unique NameNO23G00600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3186
Alignment locationchr23:243569..246754 +

Link to JBrowse

Properties
Property NameValue
DescriptionL-threonine ammonia-lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:243569..246754 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926TrpB-like_PLP-dep
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO23G00600 vs. NCBI_GenBank
Match: CBN79579.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 540.0 bits (1390), Expect = 7.300e-150
Identity = 266/416 (63.94%), Postives = 328/416 (78.85%), Query Frame = 0
Query:   59 PVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAW-DLTAMGKTVTE 474
            PV+F DVS AM RIR+GI+R+   +SHFLSDLC  +++ K E+SQFTGSFKERGARNAL+ L +EE+KRGV+AASAGNHALAL+WHG QLGIPV+V MP +APL KV+KC+ FG NV+  GQHI EAKD+A S P ++G++YINGYDD EIVAGAGT+G+E+LEQ+  VDY++VPVGGAGL+AG++LA KTL+PE KV+GVEP  C S  AAL  GKPV A+   TLADGLAVP VG  AF VA+ + D V  V EK IAL++LRLLE E+ VVEGGGA+GLAA+LPGGPLD+P  K K VV+ LCGGNID+ +LGRVIDRGLAAD RL+RF+ TVSDRPGGIA L   I+  G SI+DI HER+WL+ ++D+V +K +VET G  H E L ++L A GYD+ W D T  G +  E
Sbjct:   73 PVSFLDVSKAMHRIRDGIVRSDMKRSHFLSDLCGMEVYLKQEFSQFTGSFKERGARNALMCLDEEERKRGVIAASAGNHALALAWHGTQLGIPVTVVMPTIAPLTKVNKCKAFGVNVVQFGQHILEAKDHATSAPQFKGMRYINGYDDVEIVAGAGTMGMEILEQVPDVDYIVVPVGGAGLIAGIALATKTLQPEVKVLGVEPHFCPSLTAALKAGKPVHAETTATLADGLAVPTVGGQAFKVAQAHVDGVSLVSEKYIALSVLRLLEMEKFVVEGGGASGLAAILPGGPLDIPGLKGKKVVIPLCGGNIDVPVLGRVIDRGLAADMRLVRFVTTVSDRPGGIAELAASISQAGGSIRDIYHERAWLHSNMDQVQIKVVVETFGEAHRESLHKALEAKGYDMNWGDDTEGGASAKE 488          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: XP_005784710.1 (hypothetical protein EMIHUDRAFT_429609 [Emiliania huxleyi CCMP1516] >EOD32281.1 hypothetical protein EMIHUDRAFT_429609 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 517.3 bits (1331), Expect = 5.000e-143
Identity = 266/456 (58.33%), Postives = 337/456 (73.90%), Query Frame = 0
Query:   23 RHHPLLRAASKQVHLQQQSQGFASAEPSTPHYDDVPPVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAWDLTAMGKTVTEDDREN 479
            R  P LR +S+++      + F+SA       DD   V FEDV  A  RIR+GI+RT C  S+ LS++    +  K E SQ TGSFKERGARNA++ L++E+++RGV+AASAGNHALAL+WHG+QLG+PV+V MP VAP+ KV  CR FGAN+II G HIGEAKDYAL +P  QG+ YINGYDD E++AG GT+GIE+LEQ+   + ++VP+GG GL+AG++LA KTL P  +V+GVEP+ C S+ AAL  G PV A+V  TLADGLAVP VG  AF VARR+ D+VV VDEK +ALA+LRL+E ++ VVEGGGATGLAALLPGGPLD P+ K K VVV LCGGNID+ +LGRVI+RGLAAD RL+R    VSDRPGGIA LT  +AA GAS+KDI HER+WL+ SVD+V +K ++ET+G EH+  + +S LA  +  A D   +  T TED   N
Sbjct:    3 RLRPCLRDSSRRL------RAFSSAAAHDLPADDC--VRFEDVVRAHHRIRSGIVRTECRPSYHLSNMTGCSIHLKKEQSQVTGSFKERGARNAIMSLSEEQRRRGVIAASAGNHALALAWHGSQLGVPVTVVMPTVAPMTKVQNCRLFGANIIIHGGHIGEAKDYALQDPALQGLTYINGYDDVEVIAGTGTLGIEMLEQVPDCEVLVVPIGGGGLIAGIALAAKTLNPAVQVVGVEPRRCASYTAALRAGHPVTAEVLPTLADGLAVPQVGPHAFAVARRWVDEVVRVDEKDVALAVLRLVEGQKMVVEGGGATGLAALLPGGPLDRPDLKGKRVVVPLCGGNIDVNVLGRVIERGLAADGRLVRLTLRVSDRPGGIAELTGVLAAAGASVKDIFHERAWLHTSVDQVTIKAVLETLGPEHNAAIMRS-LADSFPAAVDTMRLEGTWTEDGASN 449          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: KOO22997.1 (threonine dehydratase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 515.4 bits (1326), Expect = 1.900e-142
Identity = 264/426 (61.97%), Postives = 323/426 (75.82%), Query Frame = 0
Query:   52 PHYDDVPPVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAWDLTAMGKTVTEDDRE 478
            P YD    V FE V+ AM RIR GI+RT C +SH+LS++  + + FK E  QFTGSFKERGARNALL L  E ++RGV+AASAGNHALAL+WHG QLGIPV+V MP VAP+AKVDKCR FGANV+I G HIGE+K +AL    Y  ++YINGYDDPEI+AG GT+G+E+LEQ+   D V+VPVGG GL+AG++LA+KT++P  +VIGVEPK C S+ AAL+ G PV   V  TLADGLAVP VGA AF VAR + D++V VDE  +ALA+LRLLE E+ VVEGGGA GLAA+LPGGPLD  + KDK V+V LCGGNID+T+LGRVI+RGLAAD RLIR    VSDRPGGIA L K IA  GAS+KDI HER+WL+ SVD V +K ++ET G +H+ QL + L   GY+ A      G   T+D++E
Sbjct:    4 PSYD---CVRFEHVAAAMHRIRGGIVRTSCQRSHWLSEITGSHVHFKLEQQQFTGSFKERGARNALLSLDGEARRRGVVAASAGNHALALTWHGVQLGIPVTVVMPTVAPMAKVDKCRLFGANVVIHGAHIGESKQHALE--VYGDLRYINGYDDPEIIAGTGTLGMEMLEQVPDCDAVVVPVGGGGLIAGIALAMKTMQPGLRVIGVEPKRCASYSAALEAGHPVPVAVMPTLADGLAVPQVGAHAFAVARHWVDEIVTVDEAAVALAVLRLLEGEKMVVEGGGAAGLAAMLPGGPLDRLDLKDKKVLVPLCGGNIDVTVLGRVIERGLAADGRLIRLTVPVSDRPGGIAELAKAIAGMGASVKDIFHERAWLHTSVDMVVIKAVLETRGFDHNRQLIRHLRGLGYETA---KLDGINETKDEKE 421          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: XP_002178872.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49570.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 509.6 bits (1311), Expect = 1.100e-140
Identity = 252/411 (61.31%), Postives = 318/411 (77.37%), Query Frame = 0
Query:   56 DVPPVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDE--EKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAWDL 465
            D  P++F D+S A   IR G++RT C +S F+S+L    ++FK E+ QFTGSFKERGARNA+L L  +     +GV+AASAGNHA AL++HG  LG+P +V MP VAPLAKVDKCRKFGA VII G HIGEAK++A +    +G++Y+NGYDDP I+AGAGTIG+E+++ +  VD V+VP+GGAGL+AG+S AIKTL+P+ KVIGVEPK C S+ AAL  GKPV A    TLADGLAVP+VGA AF+VAR Y D+ V   EK I+LA+LRLLENE+ VVEGGGA GLAALLPGGPLD  + K K ++V LCGGNID T+LGRV+DRGLAAD RL+ F ATVSDRPGGIA L + ++  GASIKDI HER+WL+ SVD+V VKC+VE  G EH +++ ++LL  GY + W++
Sbjct:   67 DALPISFADISRAEVAIRGGVVRTTCERSPFISELIGANVYFKNEFRQFTGSFKERGARNAILTLKKKLGGALKGVIAASAGNHAQALAYHGRSLGVPATVVMPTVAPLAKVDKCRKFGARVIIKGSHIGEAKEFAETLVASEGLEYVNGYDDPPILAGAGTIGMEMIDDVPDVDVVVVPIGGAGLIAGISCAIKTLKPDTKVIGVEPKFCASYTAALRAGKPVPAPFTPTLADGLAVPIVGAHAFEVARHYVDECVLASEKCISLAVLRLLENEKVVVEGGGAAGLAALLPGGPLDRADMKGKTIIVPLCGGNIDTTVLGRVLDRGLAADMRLVNFYATVSDRPGGIAKLAQLLSDEGASIKDIYHERAWLHTSVDQVQVKCVVELQGEEHGQRVHRALLNHGYPVNWNV 477          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: GAX29466.1 (threonine dehydratase [Fistulifera solaris])

HSP 1 Score: 505.8 bits (1301), Expect = 1.500e-139
Identity = 252/407 (61.92%), Postives = 317/407 (77.89%), Query Frame = 0
Query:   59 PVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDEE--KKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAWD 464
            P+TF D+S A   IR G+ RT C +SHF+S+L    +FFK E+ QFTGSFKERGARNA+L +  E+    RGV+AASAGNHALAL++HG +LG+PV+V MP VAP+AKVDKCRKFGA +II GQHIG+AK+YA    + + + YINGYDDP I+AGAGTIG+E++  +  VD V+VPVGGAGL+AG+S AIKTL+P  KVIGVEP+ C S+ AAL  GKPV A    TLADGLAVP+VG  AF+VA  Y D+ V  +E  I+LA+LRL+E E+ VVEGGGA GLAALLPGG LD  + K KN+VV LCGGNID T+LGRV++RGLAAD RL+ F ATVSDRPGGI+GLT  ++  GASIKDI HER+WL+ +VD+V VKC+VE  G EH ++L+ +L++AGY + W+
Sbjct:   50 PITFADISRADVAIRGGVKRTVCERSHFISELVGANVFFKQEFRQFTGSFKERGARNAILQVKREKGNSLRGVIAASAGNHALALAYHGKELGVPVTVVMPSVAPMAKVDKCRKFGARIIIEGQHIGQAKEYAEMLVEKEDLHYINGYDDPPILAGAGTIGMEIMNDVPCVDVVVVPVGGAGLIAGISCAIKTLKPCVKVIGVEPEFCASYTAALRAGKPVPAPFTPTLADGLAVPVVGPHAFEVASAYVDECVLTNEMEISLAVLRLIEQEKMVVEGGGAAGLAALLPGGALDRYDMKGKNIVVPLCGGNIDTTVLGRVLERGLAADKRLVNFYATVSDRPGGISGLTTLLSNEGASIKDIYHERAWLHSNVDQVQVKCVVELQGVEHGKRLQNALISAGYPVVWN 456          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: GAX26263.1 (threonine dehydratase [Fistulifera solaris])

HSP 1 Score: 505.8 bits (1301), Expect = 1.500e-139
Identity = 254/420 (60.48%), Postives = 323/420 (76.90%), Query Frame = 0
Query:   46 SAEPSTPHYDDVPPVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDEEKK--RGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAWD 464
            +A+  TP   +  P+TF D+S A   IR G+ RT C +SHF+S+L    +FFK E+ QFTGSFKERGARNA+L +  E+    RGV+AASAGNHALAL++HG +LG+PV+V MP VAP+AKVDKCRKFGA +II GQHIG+AK+YA    + + + YINGYDDP I+AGAGTIG+E++  +  VD V+VPVGGAGL+AG+S AIKTL+P  KVIGVEP+ C S+ AAL  G+PV A    TLADGLAVP+VG  AF+VA  Y D+ V  +E  I+LA+LRL+E E+ VVEGGGA GLAALLPGG LD  + K KN+VV LCGGNID T+LGRV++RGLAAD RL+ F ATVSDRPGGI+GLT  ++  GASIKDI HER+WL+ +VD+V VKC+VE  G EH ++L+ +L++AGY + W+
Sbjct:   35 TAKTETPRDLNNLPITFADISRADVAIRGGVKRTVCERSHFISELVGANVFFKQEFRQFTGSFKERGARNAILQVKREKGNALRGVIAASAGNHALALAYHGKELGVPVTVVMPSVAPMAKVDKCRKFGARIIIEGQHIGQAKEYAEMLVEKEDLHYINGYDDPPILAGAGTIGMEIMNDVPCVDVVVVPVGGAGLIAGISCAIKTLKPCVKVIGVEPEFCASYTAALKAGRPVPAPFTPTLADGLAVPVVGPHAFEVASAYVDECVLTNEMEISLAVLRLIEQEKMVVEGGGAAGLAALLPGGALDRYDMKGKNIVVPLCGGNIDTTVLGRVLERGLAADKRLVNFYATVSDRPGGISGLTTLLSNEGASIKDIYHERAWLHSNVDQVQVKCVVELQGVEHGKRLQNALISAGYPVVWN 454          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: XP_002290301.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED92053.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 495.0 bits (1273), Expect = 2.700e-136
Identity = 246/396 (62.12%), Postives = 308/396 (77.78%), Query Frame = 0
Query:   62 FEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDEE----KKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSL 454
            F D+S A   IRNG+IRTPC KS+FLS+L    +F KTE+ QFTGSFKERGARNA+L L  E+    +  GV+AASAGNHALAL++HG  LG+PV+V MP VAPLAKVDKC+KFGA +II G HIGE+K++A      +G+ Y+NGYDDP I+AGAGTIGIE++E +  VD V+VP+GGAGL+AG+S A+KTL+P+  V GVEP+   S+ +AL  GKPV A V  TLADGLAVP+VG  AF+VAR Y D+ V   EK ++LA+LRL+ENE+ VVEGGGATGLAALLPG  LD PE K KN+VV LCGGNID T+LGRVI+RGLAAD+R+  FIATVSDRPGGI  LT  +   GASIKD+ HER+++Y ++D V VK +VE  G++H+ QL+Q+L
Sbjct:    1 FADISRANVAIRNGVIRTPCKKSYFLSELLGANIFLKTEFQQFTGSFKERGARNAILQLLREQGDCVRNTGVIAASAGNHALALAYHGKDLGVPVTVVMPTVAPLAKVDKCKKFGARIIIEGAHIGESKEFAERLGATEGLSYVNGYDDPPIIAGAGTIGIEIIEDVPCVDAVVVPIGGAGLIAGISAAVKTLKPDVLVYGVEPEFAASYTSALQAGKPVPAIVTPTLADGLAVPVVGPHAFEVARHYVDECVLCTEKEVSLAILRLIENEKMVVEGGGATGLAALLPGAKLDRPELKGKNIVVPLCGGNIDTTVLGRVIERGLAADDRMRNFIATVSDRPGGIGRLTTLLGEVGASIKDMYHERAFMYSNIDHVKVKVVVELQGKDHARQLKQAL 396          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: XP_005756941.1 (hypothetical protein EMIHUDRAFT_417175 [Emiliania huxleyi CCMP1516] >EOD04512.1 hypothetical protein EMIHUDRAFT_417175 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 483.8 bits (1244), Expect = 6.200e-133
Identity = 239/384 (62.24%), Postives = 299/384 (77.86%), Query Frame = 0
Query:   95 LFFKTEYSQFTGSFKERGARNALLLLTDEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAWDLTAMGKTVTEDDREN 479
            +  K E SQ TGSFKERGARNA++ L++E+++RGV+AASAGNHALAL+WHG+QLG+PV+V MP VAP+ KV  CR FGAN+II G HIGEAKDYAL +P  QG+ YINGYDD E++AG GT+GIE+LEQ+   + ++VP+GG GL+AG++LA KTL P  +V+GVEP+ C S+ AAL  G PV A+V  TLADGLAVP VG  AF VARR+ D+VV VDEK +ALA+LRL+E ++ VVEGGGATGLAALLPGGPLD P+ K K VVV LCGGNID+ +LGRVI+RGLAAD RL+R    VSDRPGGIA LT  +AA GAS+KDI HER+WL+ SVD+V +K ++ET+G EH+  + +S LA  +  A D   +  T TED   N
Sbjct:    6 IHLKKEQSQVTGSFKERGARNAIMSLSEEQRRRGVIAASAGNHALALAWHGSQLGVPVTVVMPTVAPMTKVQNCRLFGANIIIHGGHIGEAKDYALQDPALQGLTYINGYDDVEVIAGTGTLGIEMLEQVPDCEVLVVPIGGGGLIAGIALAAKTLNPAVQVVGVEPRRCASYTAALRAGHPVTAEVLPTLADGLAVPRVGPHAFAVARRWVDEVVRVDEKDVALAVLRLVEGQKMVVEGGGATGLAALLPGGPLDRPDLKGKRVVVPLCGGNIDVNVLGRVIERGLAADGRLVRLTLRVSDRPGGIAELTGVLAAAGASVKDIFHERAWLHTSVDQVTIKAVLETLGPEHNAAIMRS-LADSFPAAVDTMRLEGTWTEDGASN 388          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: OEU14870.1 (tryptophan synthase beta subunit-like PLP-dependent enzyme [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 483.8 bits (1244), Expect = 6.200e-133
Identity = 250/421 (59.38%), Postives = 311/421 (73.87%), Query Frame = 0
Query:   58 PPVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLL--------------TDEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTLRPE-CKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPL-DLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYDLAW 463
            P   F D+S AM  IR+GI RT C +S+FLS+LC+  ++ K E+ QFTGSFKERGARNA+L L                      V+AASAGNHALAL++HG +LG+PV+V MP +APL KVD+CR+FGA +I+ G HIGE+K YA      Q + YINGYDD  IVAGAGT+GIE++E +  VD V+VPVGG GL+AGVS AIKTL+P  CKVIGVEP+ C S+ AAL  GKPV   V  TLADGLAVP VG+ AF VA +Y D+ V V+EK I++A+LRL+ENE+ VVEGGGATGLAALLPGG L   P+   KN+VV LCGGNID T+LGRV++RGLAADNRL+ F A VSDRPGGIA LT+ ++  GASIKDI HER+WL+ SVD+V VKC+VE  G +H+E L+++L+  GY + W
Sbjct:   80 PITDFSDISRAMVAIRDGIRRTTCIQSYFLSELCQATIYLKPEFRQFTGSFKERGARNAILQLLAAXXXXXXXXXXXXXXXXXXXVIAASAGNHALALAYHGKELGVPVTVVMPSIAPLLKVDRCRQFGATIIMKGAHIGESKLYAEQLAIEQKLHYINGYDDRAIVAGAGTMGIEIMEDVPNVDIVVVPVGGGGLIAGVSCAIKTLKPSGCKVIGVEPEYCASYTAALKAGKPVPVQVQNTLADGLAVPTVGSHAFQVATKYVDECVLVNEKDISIAVLRLIENEKMVVEGGGATGLAALLPGGSLFGRPDIIGKNIVVPLCGGNIDTTVLGRVLERGLAADNRLLDFYAEVSDRPGGIAKLTQLLSEMGASIKDIYHERAWLHTSVDRVQVKCVVELNGIDHAELLKKALIENGYPIIW 500          
BLAST of NO23G00600 vs. NCBI_GenBank
Match: XP_009033366.1 (hypothetical protein AURANDRAFT_20121 [Aureococcus anophagefferens] >EGB12312.1 hypothetical protein AURANDRAFT_20121 [Aureococcus anophagefferens])

HSP 1 Score: 480.7 bits (1236), Expect = 5.200e-132
Identity = 242/408 (59.31%), Postives = 306/408 (75.00%), Query Frame = 0
Query:   59 PVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTEYSQFTGSFKERGARNALLLLTDEEKKRGVMAASAGNHALALSWHGAQLGIPVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKYINGYDDPEIVAGAGTIGIEVLEQISK---VDYVIVPVGGAGLLAGVSLAIKTLRPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFDVARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLDLPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGGIAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLRQSLLAAGYD-LAW 463
            PV FEDV+ A  RIR G+ RT    SH+LS LC  ++F K E + FTGSFKERGARNALL L++EE+ RGV+AASAGNHALALSWHG QLG+PVSV MP VAP+AK  KC  FGA++++ G  IG+AK +A +   +  + Y+NGYDD  I+AGAGT+G+E++EQ+ +    DYV+VP GGAGLLAGVSLAIKTLRP+ +V+GVEP+NC SF  AL  G P   +   TLADGLAVP VGA AF+VAR + DDV  VDE  +ALA+LRLLENE+  +EGGGATGLAA+LPGGP    + +   V V LCGGNID+T LGRVIDRG+AAD RL+RF+A VSDR GGIA  T+ ++  GAS+KD+ HER+WL  +VD+V +K I+E  G +HS  +R++++ AG   L W
Sbjct:    7 PVLFEDVAIAATRIRGGVTRTALTHSHWLSQLCGCEVFLKHEQTMFTGSFKERGARNALLSLSEEERARGVVAASAGNHALALSWHGKQLGVPVSVLMPTVAPMAKRSKCATFGAHIVVHGDTIGDAKLHAETTAPFCDMTYVNGYDDVPIIAGAGTLGLELIEQLPEGDHFDYVMVPCGGAGLLAGVSLAIKTLRPQTRVVGVEPRNCASFSHALAVGHPDPVETTSTLADGLAVPTVGANAFEVARAHADDVCIVDEADVALAVLRLLENEKVTIEGGGATGLAAILPGGPYH-DQVRGAKVAVPLCGGNIDVTTLGRVIDRGMAADGRLVRFVAEVSDRSGGIAQCTEILSRHGASVKDVFHERAWLQSAVDRVQIKFILECTGADHSRAVREAMIDAGVTILVW 413          
The following BLAST results are available for this feature:
BLAST of NO23G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN79579.17.300e-15063.94conserved unknown protein [Ectocarpus siliculosus][more]
XP_005784710.15.000e-14358.33hypothetical protein EMIHUDRAFT_429609 [Emiliania ... [more]
KOO22997.11.900e-14261.97threonine dehydratase [Chrysochromulina sp. CCMP29... [more]
XP_002178872.11.100e-14061.31predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX29466.11.500e-13961.92threonine dehydratase [Fistulifera solaris][more]
GAX26263.11.500e-13960.48threonine dehydratase [Fistulifera solaris][more]
XP_002290301.12.700e-13662.12predicted protein, partial [Thalassiosira pseudona... [more]
XP_005756941.16.200e-13362.24hypothetical protein EMIHUDRAFT_417175 [Emiliania ... [more]
OEU14870.16.200e-13359.38tryptophan synthase beta subunit-like PLP-dependen... [more]
XP_009033366.15.200e-13259.31hypothetical protein AURANDRAFT_20121 [Aureococcus... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00600.1NO23G00600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|195297gene_8405Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100586g1gene7474Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00600.1NO23G00600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00600 ID=NO23G00600|Name=NO23G00600|organism=Nannochloropsis oceanica|type=gene|length=3186bp
ATGCTGAACTTCCTCCCCCGTCTGGTAGGGAGCCTTAGGAACGCTAGTGG
CACTGCTGGCAGCGCGCGGCATCACCCCTTGCTTCGTGCTGCTTCCAAAC
AGGTGCATTTGCAGCAGCAGTCGCAGGGATTTGCGTCGGCTGAGgtaagg
gtgggagagaagaaaagtaaaaaaaattggcccggcacacagcttctacc
tctgcttgtcgacaccgggcgtttcagatgttaatcatcattcatcattg
gaacaacaacagCCCTCCACCCCGCACTATGACGATGTGCCGCCTGTCAC
CTTCGAAGACGTCTCCACGGCCATGTTCCGCATACGCAATGGCATCATTC
GCACTCCCTGCTACAAGgtaactaccgttgccctcccgtaatctcacccc
ccccgatccttccattcttaattgccttgaccgcggacgacatttgacac
tccaactcgtccttgtaaaaacatgcttatgcggctttcttatttttaca
ttactcaaacccctccttcgtcacgccagTCGCACTTCCTCTCGGACCTG
TGCAAGACGAAGCTCTTCTTCAAGACGGAGTACTCCCAATTCACCGGCAG
CTTCAAGGAGCGTGGCGCCCGTAACGCTCTCCTCCTCTTGACCGATGAAG
AGgtgcgtctttcttctgtcatcctttccctttttgatcttacctatcga
cctccctcctccctccctccctccctccctccctcccttaaaccccatcc
agAAAAAACGCGGCGTGATGGCAGCCTCTGCCGGCAACCACGCCCTCGCC
TTGTCCTGGCACGGGGCCCAGCTCGGCATCCCTGTCTCAGTATTCATGCC
AGTCGTGGCCCCGCTGGCCAAGGTGGACAAGTGCCGCAAATTTGGCGCCA
ACGTCATCATCACCGGCCAGCACATCGGGGAAGCCAAGgtccgtgccctc
cctccctcccttcctccatccctccgtccctccctccctcttcatctttt
ccacgatcatgcccagctcgccaagcgtgtcgtttgaacatccaccctta
tctctacttcccactaccaccccaccacccttccttcctccctccctccc
tgcctccctctctcagGACTACGCTCTCTCCAACCCTGACTACCAGGGCG
TCAAGTACATCAATGGCTACGACGACCCGGAGATTGTGGCGGGTGCCGGT
ACCATTGGTATAGAGGTATTGGAGCAGATTTCCAAGgtacgccctccctc
cctctttcgatccctcctccctttctcccttccctcctccctcccctcca
acctccctcgagtaaaccccccatccctttcctcacgcctttctgtagtc
atcaagacgctgccgcctcccgcctgagtattgcacttgttgtatgaggg
aagagtccccccctccccccctccctccctccctccctccctccctctca
ccctcccgccctctcacccccccgccctccccagGTGGACTATGTGATCG
TCCCTGTGGGTGGGGCGGGCCTCCTGGCAGGCGTGTCCCTGGCCATCAAG
ACTCTGCGGCCCGAATGCAAGGTGATCGGCGTGGAACCTAAGAATTGTCG
CTCCTTCCAAGCCGCCCTCGACCATGGGAAGCCGGTCGTCGCCGACGTTG
CCGGgtaaggaaagcaagacaacagccaaagctctcccctttatccctcc
tcccctccccccctcgccttcgtgagctccagagcactccgccatccccc
ccccggacatgaatgaaagagagagagagagagagagagagagagagaga
gagagagagagagagagagagagagagagaaactgctcatgtgcttgctc
tacccccccccgaggcctctttcactcgtcccaagccgtatcattcgatg
aagcagtccggaacaataattgcccatacccgcacccctccctcactatc
cctcgtcccccacctccttcttcattcgtcttgtcatgggtccacgcaat
ccacccacagCACGCTCGCGGACGGCCTGGCCGTGCCCATGGTGGGGGCC
ACGGCCTTCGACGTGGCGCGGCGGTACACGGACGACGTGGTGTTCGTGGA
CGAGAAGATGATCGCCCTGGCCATGCTCCGCCTCCTCGAGAATGAGCGCA
GCGTCGTGGAGGGGGGGGGGGCAACCGGGCTGGCTGCCTTGCTCCCTGGG
GGTCCACTGGACCTGCCGGAATACAAGGACAAAAATGTGGTGGTGCTGCT
CTGTGGAGGGAATATCGgtaagaaacagggagggagggtgtacggaggga
gggagggagggagggagggagggagggagggagggagagaaggaggtaat
ggtttggtcaaactcaatctcacagcggcgaatgtcagttcacactcctt
cttcccccctcttttcctccctttctccatctctcccttcctccctttca
tcctgtctcggtctgcctccctccctccctccctccagACATCACCATGC
TGGGCCGGGTCATCGATCGAGGGCTGGCTGCCGACAATCGCCTCATCCGC
TTCATTGCTACCGTGTCCGATCGACCTGGGGGCATCGCTGGTCTCACCAA
Ggtatgtcttccctccctccctccctccctccctctctccctttccctcc
ctccctccctccctccctccctcccttcccccctctccctctctcgatgt
gctggcgtggcgctcgaaggcccggcctgctccaggtacctggtcaacgg
aaaacctccctccctccctccccgggacgtcgcttgtttgaaaggcatat
acgtatgggccatcccgcactctcttctaggcatgagactgatgcctctc
cttcaccggcgctcggagcaaggatggcagtcgcgggccttggctggctc
gaccatctcttgaattcctttaaatctccctccctccctccctccctccc
tttctccttccttccagGACATTGCTGCCTGCGGAGCTTCGATCAAAGAC
ATCATCCACGAGCGCTCCTGGCTCTACCATTCTGTGGACAAGGTCAACGT
GAAGTGCATCGTGGAGACCATGGGGAGGGAGCACTCGGAGCAGCTGCGGC
AGTCATTGTTGGCCGCCGGGTACGACCTTGCGTGGGACCTGACAGCGATG
GGGAAAACCGTGACGGAGGATGACAGGGAAAACTAA
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protein sequence of NO23G00600.1

>NO23G00600.1-protein ID=NO23G00600.1-protein|Name=NO23G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MLNFLPRLVGSLRNASGTAGSARHHPLLRAASKQVHLQQQSQGFASAEPS
TPHYDDVPPVTFEDVSTAMFRIRNGIIRTPCYKSHFLSDLCKTKLFFKTE
YSQFTGSFKERGARNALLLLTDEEKKRGVMAASAGNHALALSWHGAQLGI
PVSVFMPVVAPLAKVDKCRKFGANVIITGQHIGEAKDYALSNPDYQGVKY
INGYDDPEIVAGAGTIGIEVLEQISKVDYVIVPVGGAGLLAGVSLAIKTL
RPECKVIGVEPKNCRSFQAALDHGKPVVADVAGTLADGLAVPMVGATAFD
VARRYTDDVVFVDEKMIALAMLRLLENERSVVEGGGATGLAALLPGGPLD
LPEYKDKNVVVLLCGGNIDITMLGRVIDRGLAADNRLIRFIATVSDRPGG
IAGLTKDIAACGASIKDIIHERSWLYHSVDKVNVKCIVETMGREHSEQLR
QSLLAAGYDLAWDLTAMGKTVTEDDREN*
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Synonyms
Publications