NO23G00500, NO23G00500 (gene) Nannochloropsis oceanica

Overview
NameNO23G00500
Unique NameNO23G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1245
Alignment locationchr23:215097..216341 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlycoside hydrolase 15-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:215097..216341 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006869DUF547
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO23G00500 vs. NCBI_GenBank
Match: EWM22984.1 (glycoside hydrolase 15-like protein [Nannochloropsis gaditana])

HSP 1 Score: 228.0 bits (580), Expect = 5.300e-56
Identity = 154/288 (53.47%), Postives = 182/288 (63.19%), Query Frame = 0
Query:    1 MLTGFLSLFPGSPSSPNRRVLNDPSSFPPFIPPSXXXXXXXSKDITITT-----LAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLP------------------SXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFYEGG 266
            ML GFLS+    P+S  +RVLNDP++FPP + PS           T +T     L QDLR+ +R  Q  FLS +GK +DY SLL SEAF SYL +TT LA+  G+ +LS +ERKATFLNLYNCLVIHA+ LDS+                              SRT F+A+TCY V GHILSLDD+E+GLLRGNRRSPN LAR ++FS +HFP+LP                  +  XXXXXXXXXXXXXXXXXX   WIVPLD RIHFALNCGA SCPAIR+YE G
Sbjct:   10 MLGGFLSIL---PASGPKRVLNDPNTFPPALVPSSSFASFPPSPPTSSTNNVSLLIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSA----------------------RPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSXXXXXTNAPTXXXXXXXXXXXXXXXXXXLADWIVPLDARIHFALNCGANSCPAIRYYEAG 272          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: GAQ80261.1 (hypothetical protein KFL_000500130 [Klebsormidium nitens])

HSP 1 Score: 115.5 bits (288), Expect = 3.800e-22
Identity = 101/367 (27.52%), Postives = 142/367 (38.69%), Query Frame = 0
Query:   48 TTLAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNR-RSPNFLARRALFSK--RHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFYEGGKEGRGVSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTFFAGVCVEREGXXXXXXXXXXVVVHLSKICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVEGGSGGGREVKVEYLPYDWGVN 412
            T +A +LR+         LS DGK++ YS L  S  + +Y   T  L     + S+S  E+ A F+N+YN LV+H    + +P+                             R  F+++T Y++ GH  SLDD+EHG+LRGNR +S + L +R    K  R F  +P                           P+DPRIHFALNCGA SCP I+ Y       G+ G                                              A + F    V+ +G            V LSKI DWYK DF       G   E  L+ +L + P+E + +V           ++Y  YDW VN
Sbjct:  240 TQVAGELRRRILELYDEALSKDGKSVSYSQLAASPTYAAYREATEELQRVD-LYSMSRQEKMAFFINVYNALVVHGFVAEGTPS-------------------------SFFDRLFFYSRTKYHIDGHDYSLDDIEHGVLRGNRPKSASLLKQRPFGPKDPRRFHAIP---------------------------PVDPRIHFALNCGAKSCPPIKLYTPENLDEGLEG----------------------------------------------AASAFVEGEVDVDGDSG--------AVTLSKIMDWYKEDF-------GSTPEERLKWLLPYLPKE-KSQVLAKLIKKARFTIQYSKYDWAVN 491          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: XP_015767391.1 (PREDICTED: uncharacterized protein LOC107346125 isoform X2 [Acropora digitifera])

HSP 1 Score: 109.8 bits (273), Expect = 2.100e-20
Identity = 96/371 (25.88%), Postives = 151/371 (40.70%), Query Frame = 0
Query:   45 ITITTLAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVP-LDPRIHFALNCGAISCPAIRFYEGGKEGRGVSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTFFAGVCVEREGXXXXXXXXXXVVVHLSKICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVEGGSGGGREVKVEYLPYDWGVNMKK 415
            ++   L+++L+K   + +  F+S DG T+DY++L +S+ F  Y+ +T  L     + SL   E+ A FLN+YN L IH +A+  +                                + F+ +T YN+ G+I SLDD+EHG+LRGNR  P+    R+LF++    D                          ++V  +DPRIHFAL CGA SCPAI+ +       G++                                               AR+F +   +                V LS+I  WYK+DF       G  +E  LR ++Q   ++ + ++     G   +KV Y  YDW +N  K
Sbjct:   30 LSAVDLSKELQKLMLKIKGRFISEDGHTVDYNALKESDLFKEYVKMTAALTQV-NLTSLERTEKIAFFLNIYNSLTIHGLAVCEN-----------------------GIPDSVLEISRFWRRTAYNIGGYIFSLDDIEHGILRGNRPHPS--DGRSLFAEGDPRD-------------------------QFVVSNVDPRIHFALVCGAKSCPAIQVFTAKNLESGLAA---------------------------------------------AARSFCSQEVITDNNE-----------VILSRIFLWYKTDF-------GSSDEERLRWIMQHLDKDEQEKL-NILLGAPNIKVSYKEYDWNLNGSK 285          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: XP_020904224.1 (uncharacterized protein LOC110242557 [Exaiptasia pallida])

HSP 1 Score: 107.5 bits (267), Expect = 1.000e-19
Identity = 100/365 (27.40%), Postives = 140/365 (38.36%), Query Frame = 0
Query:   50 LAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFYEGGKEGRGVSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTFFAGVCVEREGXXXXXXXXXXVVVHLSKICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVE---GGSGGGREVKVEYLPYDWGVN 412
            L++DL+K   R +  F+S DG+ +DY+SL  S+ F  Y  L   L     I  LS+ E+ A FLN+YN L IH +A+ S                                   F+  T YN+ G+ LSLDD+EHG+LRGN+  P+  +   LF+K                                I P+DPRIHFAL CGA SCP I  Y       G++                                               A   F    VE  G            V LSKI  WYK DFAE       ++  +LR +  + P + + ++        G  +V++EY  Y+W +N
Sbjct:   27 LSKDLQKLMLRIKGSFMSDDGRGIDYASLKNSKLFEEYQSLAHDL-QGTAITVLSVEEKMAFFLNVYNALTIHGLAMSS--------------------HKDGHLPTSVLEIKQFWRNTAYNIGGYTLSLDDIEHGILRGNKPHPS--SPTPLFTKE------------------------DPRCELTIKPMDPRIHFALVCGAKSCPPINVYSEKNLENGLNA----------------------------------------------ASKNFCSQEVEIVGNK----------VILSKIFMWYKQDFAE-------DDISLLRWISTYLPTDMKTKMGHLIKQMEGNEKVEIEYKGYNWTLN 281          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: XP_013758597.1 (glutaredoxin [Thecamonas trahens ATCC 50062] >KNC48485.1 glutaredoxin [Thecamonas trahens ATCC 50062])

HSP 1 Score: 104.0 bits (258), Expect = 1.200e-18
Identity = 68/200 (34.00%), Postives = 94/200 (47.00%), Query Frame = 0
Query:   66 LSADGKTMDYSSLLQSEAFVSYLHLTTLLA---SAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFY 263
            LS DG+ +DY+S+  S AF  Y+     LA   +   +  L+ ++ KATF+NLYN +VIHA  +  +P                              RT FFAQ+ Y + G +LSLDD+EHG+LRGN   P    R +       P L +                      + + P+DPRIHFAL CGA+SCP IR +
Sbjct:   42 LSDDGRQVDYASMRASTAFGQYVAEVARLADEVTVDQLCDLTDDQVKATFINLYNAIVIHATVVRGAPG-------------------------DMAQRTSFFAQSAYRIGGELLSLDDIEHGVLRGNAVHPAPWFRGSQLDVARRPQLAA--------------------LAARMRPVDPRIHFALVCGAVSCPPIRVF 196          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: KXJ12165.1 (hypothetical protein AC249_AIPGENE9771 [Exaiptasia pallida])

HSP 1 Score: 101.3 bits (251), Expect = 7.500e-18
Identity = 96/355 (27.04%), Postives = 133/355 (37.46%), Query Frame = 0
Query:   60 RWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFYEGGKEGRGVSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTFFAGVCVEREGXXXXXXXXXXVVVHLSKICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVE---GGSGGGREVKVEYLPYDWGVN 412
            R +  F+S DG+ +DY+SL  S+ F  Y  L   L     I  LS+ E+ A FLN+YN L IH +A+ S                                   F+  T YN+ G+ LSLDD+EHG+LRGN+  P+  +   LF+K                                I P+DPRIHFAL CGA SCP I  Y       G++                                               A   F    VE  G            V LSKI  WYK DFAE       ++  +LR +  + P + + ++        G  +V++EY  Y+W +N
Sbjct:    3 RIKGSFMSDDGRGIDYASLKNSKLFEEYQSLAHDL-QGTAITVLSVEEKMAFFLNVYNALTIHGLAMSS--------------------HKDGHLPTSVLEIKQFWRNTAYNIGGYTLSLDDIEHGILRGNKPHPS--SPTPLFTKE------------------------DPRCELTIKPMDPRIHFALVCGAKSCPPINVYSEKNLENGLNA----------------------------------------------ASKNFCSQEVEIVGNK----------VILSKIFMWYKQDFAE-------DDISLLRWISTYLPTDMKTKMGHLIKQMEGNEKVEIEYKGYNWTLN 247          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: XP_015767383.1 (PREDICTED: uncharacterized protein LOC107346125 isoform X1 [Acropora digitifera])

HSP 1 Score: 101.3 bits (251), Expect = 7.500e-18
Identity = 69/219 (31.51%), Postives = 107/219 (48.86%), Query Frame = 0
Query:   45 ITITTLAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVP-LDPRIHFALNCGAISCPAIRFY 263
            ++   L+++L+K   + +  F+S DG T+DY++L +S+ F  Y+ +T  L     + SL   E+ A FLN+YN L IH +A+  +                                + F+ +T YN+ G+I SLDD+EHG+LRGNR  P+    R+LF++    D                          ++V  +DPRIHFAL CGA SCPAI+ +
Sbjct:   30 LSAVDLSKELQKLMLKIKGRFISEDGHTVDYNALKESDLFKEYVKMTAALTQV-NLTSLERTEKIAFFLNIYNSLTIHGLAVCEN-----------------------GIPDSVLEISRFWRRTAYNIGGYIFSLDDIEHGILRGNRPHPS--DGRSLFAEGDPRD-------------------------QFVVSNVDPRIHFALVCGAKSCPAIQVF 197          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: GAX80471.1 (hypothetical protein CEUSTIGMA_g7910.t1 [Chlamydomonas eustigma])

HSP 1 Score: 99.8 bits (247), Expect = 2.200e-17
Identity = 98/365 (26.85%), Postives = 134/365 (36.71%), Query Frame = 0
Query:   50 LAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNR-RSPNFLARRAL--FSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFYEGGKEGRGVSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTFFAGVCVEREGXXXXXXXXXXVVVHLSKICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVEGGSGGGREVKVEYLPYDWGVN 412
            +A +LR+      S  LS DG+++DY  + +   F  Y++ T  L     I  LS  E  A F+NLYN L+IHA+ +                                 +R+ FF    Y + G+  + DDME+G+LRGNR  + N  +   L  FSK  FPD                           +  LDPRIHFAL CGA SCP I+ Y       G++                                               A   F G  +E +            VV +SKI  WY SDF       G  +   LR +L +    A  E+E    G   +K+ Y  YDW VN
Sbjct:  259 VAAELRQLILELYSKHLSPDGRSVDYKHMGEDPLFRKYVNATAELQQVD-IEPLSSIELTALFINLYNALIIHALVV-----------------------LGADMLSNASTRSRFFTYAQYCIGGNEYTADDMENGVLRGNRPAASNIWSVLGLPQFSKGQFPDKADPRRAKV------------------VDVLDPRIHFALVCGAKSCPPIKLYTADNLDEGLNA----------------------------------------------AGEAFCGSEIEVDKVQR--------VVRMSKIFKWYASDF-------GANQTERLRWLLPFLKGRAYEELEELLKGRHTIKIVYKEYDWNVN 520          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: XP_005823012.1 (hypothetical protein GUITHDRAFT_155342 [Guillardia theta CCMP2712] >EKX36032.1 hypothetical protein GUITHDRAFT_155342 [Guillardia theta CCMP2712])

HSP 1 Score: 98.6 bits (244), Expect = 4.800e-17
Identity = 100/413 (24.21%), Postives = 149/413 (36.08%), Query Frame = 0
Query:    1 MLTGFLSLFPGSPSSPNRRVLNDPSSFPPFIPPSXXXXXXXSKDITITTLAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFYEGGKEGRGVSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTFFAGVCVEREGXXXXXXXXXXVVVHLSKICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVEGGSGGGREVKVEYLPYDWGVNMK 414
            ++ G L      P +   RVLND +S       +         D     L+  LR+         LS DG  +DY  +  SE +  Y  L   L       S+   ER A F+N+YNCLVI AI     P                             SR   +A+  YN+ G   SL+D+E+G+LRGN+  P        F+++ F +  +                            DPRIHFALNCGA  CP IRFY G +                                                     AR+F   + V+++            VV++S+I  WY++DF      +       LR V ++  E+ +  +      G+  ++++ PYDWG+N K
Sbjct:   15 LIVGVLGYLQLLPRATGLRVLNDKTS-------AGKAAGEQEGD-----LSAALRRSMTTLYGRHLSEDGTQLDYGGMAASEEYAGYKALAEGLREVD-TRSMGEEERVAFFINVYNCLVIDAIISLGEP-------------------------KDLLSRLRMYAEAAYNIGGANFSLNDIENGVLRGNQSPPTINP----FAQKPFGEGDARAGIACKKP-------------------DPRIHFALNCGARGCPPIRFYRGEE---------------------------------------------LDAMLDKAARSFCKSIEVDQDKG----------VVYMSQIFKWYENDFQSDSTDK--PPVSTLRFVEKYLDEDKKDALSRFLESGKVPELKFQPYDWGLNSK 309          
BLAST of NO23G00500 vs. NCBI_GenBank
Match: XP_007514527.1 (predicted protein [Bathycoccus prasinos] >CCO14767.1 predicted protein [Bathycoccus prasinos])

HSP 1 Score: 97.4 bits (241), Expect = 1.100e-16
Identity = 71/219 (32.42%), Postives = 95/219 (43.38%), Query Frame = 0
Query:   48 TTLAQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGIASLSLNERKATFLNLYNCLVIHAIALDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARRALFSKRHFPDLPSXXXXXXXXXXXXXXXXXXXXXXSWIVPLDPRIHFALNCGAISCPAIRFYEGGK 267
            TT+A DLRK        FL+ADG  +DY  + +SE F  Y  +   L        L+ ++R A F+N+YN L++HA  +   P                              R  FF +  Y++ G   S +D+EHG+LR NR SP   A   L  K   P+L                          I P+DPRIHFAL CGA SCP IR ++G K
Sbjct:  404 TTVANDLRKRILELYGSFLNADGTYVDYEGMKESEKFEEYKAVAAELQRCDP-RLLNRDDRMAFFINIYNALIVHATIVKGVP-------------------------DDTFKRLKFFDEAKYDIGGLQYSANDIEHGVLRSNRPSP--AAIGVLLGK---PELSRGPFKSGDARRECC-----------ITPMDPRIHFALVCGAKSCPPIRVFKGDK 580          
The following BLAST results are available for this feature:
BLAST of NO23G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22984.15.300e-5653.47glycoside hydrolase 15-like protein [Nannochlorops... [more]
GAQ80261.13.800e-2227.52hypothetical protein KFL_000500130 [Klebsormidium ... [more]
XP_015767391.12.100e-2025.88PREDICTED: uncharacterized protein LOC107346125 is... [more]
XP_020904224.11.000e-1927.40uncharacterized protein LOC110242557 [Exaiptasia p... [more]
XP_013758597.11.200e-1834.00glutaredoxin [Thecamonas trahens ATCC 50062] >KNC4... [more]
KXJ12165.17.500e-1827.04hypothetical protein AC249_AIPGENE9771 [Exaiptasia... [more]
XP_015767383.17.500e-1831.51PREDICTED: uncharacterized protein LOC107346125 is... [more]
GAX80471.12.200e-1726.85hypothetical protein CEUSTIGMA_g7910.t1 [Chlamydom... [more]
XP_005823012.14.800e-1724.21hypothetical protein GUITHDRAFT_155342 [Guillardia... [more]
XP_007514527.11.100e-1632.42predicted protein [Bathycoccus prasinos] >CCO14767... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00500.1NO23G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641722gene_8393Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101101g2gene7463Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00500.1NO23G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00500 ID=NO23G00500|Name=NO23G00500|organism=Nannochloropsis oceanica|type=gene|length=1245bp
ATGCTCACCGGCTTCCTCTCCCTCTTCCCCGGCAGCCCCTCGAGCCCTAA
CCGGCGCGTTCTTAACGACCCGAGCTCCTTCCCTCCCTTCATCCCTCCCT
CTCCCTCCTCCTCCTCTGCCTCTTCCAAAGACATCACAATCACCACCCTC
GCCCAGGACCTGCGCAAGGAAACCCGCCGTTGGCAATCCCTCTTCTTGTC
CGCCGACGGCAAGACCATGGATTACTCTTCCTTGCTGCAAAGCGAGGCCT
TCGTCTCCTATCTCCACCTCACCACACTCCTCGCCTCCGCCCAAGGCATT
GCCTCCCTGTCCCTGAATGAGAGAAAGGCCACGTTTTTGAATCTATACAA
TTGCCTGGTCATTCACGCTATCGCCCTTGACTCCTCGCCCGCACCCTCCA
CCTTCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCC
TCTTCCTCCTCCTCCTCTTCCGCCCTCTCCCGCACCCCCTTCTTTGCCCA
AACCTGCTACAACGTGAGCGGCCACATCCTCTCCCTCGACGACATGGAGC
ACGGCTTGCTGAGAGGGAACAGACGATCGCCGAACTTCCTTGCCCGTCGC
GCCCTTTTTTCGAAAAGGCATTTCCCGGACTTGCCCTCCCTCCCCCCATC
CTCCACCTCATCATCCTCCTCTCCCTCCTCCGCCACCACCTCATCCTCCC
TCGCCTCCTGGATTGTCCCCTTAGACCCTCGCATCCACTTCGCCTTGAAC
TGTGGCGCGATATCCTGTCCAGCCATTCGGTTTTATGAGGGAGGGAAGGA
GGGAAGGGGGGTGTCAGGGAAAGTAGAAGGAAGGGGAGGAGGAAGTGAGG
GAGGGAGGGATTCAAGTGCTGGAGGTAAGACGCAAGGCCTCTTGAGATTA
ATGGAGGGAGGAATGGAGGGAGGGCAGGATAGGTTGGACGAGCAGCTGGA
TGCCGCGGCCAGGACATTTTTTGCCGGAGTCTGTGTGGAGAGAGAGGGAG
GGAGGGAGGGAGGGAGGGAAAGAGGGAGAGTAGTGGTGCACTTGAGCAAG
ATTTGTGATTGGTACAAAAGTGATTTTGCGGAGGGGGAGGAAGGGAGGGG
AGGGGAGGAGGAAAGGATGTTGCGTAGGGTTTTGCAGTGGTTTCCCGAGG
AGGCACGGAGGGAGGTGGAGGGAGGGAGTGGGGGAGGGAGGGAGGTCAAG
GTGGAGTATTTGCCGTATGATTGGGGAGTAAATATGAAGAAGTAA
back to top

protein sequence of NO23G00500.1

>NO23G00500.1-protein ID=NO23G00500.1-protein|Name=NO23G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MLTGFLSLFPGSPSSPNRRVLNDPSSFPPFIPPSPSSSSASSKDITITTL
AQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGI
ASLSLNERKATFLNLYNCLVIHAIALDSSPAPSTFSSSSSSSSSSSSSSS
SSSSSSSALSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARR
ALFSKRHFPDLPSLPPSSTSSSSSPSSATTSSSLASWIVPLDPRIHFALN
CGAISCPAIRFYEGGKEGRGVSGKVEGRGGGSEGGRDSSAGGKTQGLLRL
MEGGMEGGQDRLDEQLDAAARTFFAGVCVEREGGREGGRERGRVVVHLSK
ICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVEGGSGGGREVK
VEYLPYDWGVNMKK*
back to top
Synonyms
Publications