NO23G00470, NO23G00470 (gene) Nannochloropsis oceanica

Overview
NameNO23G00470
Unique NameNO23G00470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2764
Alignment locationchr23:203508..206271 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:203508..206271 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013936CRT-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO23G00470 vs. NCBI_GenBank
Match: EWM22988.1 (hypothetical protein Naga_101129g2 [Nannochloropsis gaditana])

HSP 1 Score: 441.4 bits (1134), Expect = 3.300e-120
Identity = 230/319 (72.10%), Postives = 254/319 (79.62%), Query Frame = 0
Query:  122 MHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQATXXXXXXXXXXXXXXXSSSPFSPSITTGRGGGRKTKMFKNEHWQGGGLILLGIAVAMAPTVHAAFWHGHRDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFSLSPEEGE 441
            MHRFPR SI LIALLDTLSLVVMVVAGAST       FMQAT               SS P S          R+ K F   HWQGGGLILLGI VAMAPTVH AFWH   DIGINTLAYVLCCLPAA SQL KE+AII+F+QP+NFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGW+ Y  TDL TAV+D+CLCLF+ +SIPPGRYPI+P+CR+ASLATF YI  TLLVTFAVNGVLA GTP +LYRTIN SVALAF+ LA+YS+NKWAW++SYALN+FDF+GLF+VLAGME YH +PEPDTEMLT FSL  E+GE
Sbjct:    1 MHRFPRRSILLIALLDTLSLVVMVVAGASTPPVLTVLFMQAT--------LPFLLLLSSCPPSFPTCFATAKRREQKRFHRAHWQGGGLILLGIGVAMAPTVHVAFWHRQTDIGINTLAYVLCCLPAAVSQLAKEQAIIEFAQPINFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSL--EDGE 309          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: XP_005854262.1 (hypothetical protein NGA_0180900 [Nannochloropsis gaditana CCMP526] >EKU22097.1 hypothetical protein NGA_0180900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 224.9 bits (572), Expect = 4.800e-55
Identity = 107/143 (74.83%), Postives = 126/143 (88.11%), Query Frame = 0
Query:  298 MGWNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFSLSPEEGE 441
            MGW+ Y  TDL TAV+D+CLCLF+ +SIPPGRYPI+P+CR+ASLATF YI  TLLVTFAVNGVLA GTP +LYRTIN SVALAF+ LA+YS+NKWAW++SYALN+FDF+GLF+VLAGME YH +PEPDTEMLT FSL  E+GE
Sbjct:    1 MGWDPYGATDLGTAVSDLCLCLFTARSIPPGRYPIEPECRYASLATFLYILCTLLVTFAVNGVLASGTPQMLYRTINGSVALAFLALAVYSVNKWAWVSSYALNVFDFIGLFLVLAGMEWYHSQPEPDTEMLTQFSL--EDGE 141          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: CBN77280.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 127.9 bits (320), Expect = 8.100e-26
Identity = 113/394 (28.68%), Postives = 181/394 (45.94%), Query Frame = 0
Query:   73 ERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQATXXXXXXXXXXXXXXXSSSPFSPSITTGRGGGRKTKMFKNEHWQGGGLILLGIAVAM----------APTVH-AAFWHGHRDI-------------GINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWNTYAMTDLSTAVTDMCLCLFSGQSIPP-GRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILY-RTINSSVALAFVVLALYSMNKWAWITSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFSLSPEEGE 441
            ER+ FK+ +D+M PFR  LA  V     +  GVVVL +++    E   SM  FP W + ++A+LD L LV M+VA A          +Q                  S+PF  +++    GG  ++ +  +   G  +I LG  VA+            T+H  A  H +  +             G NT+ YVL CLPAA S + K+ A+ +  +P++ + L+L +  ++ V + + +P  Y+LQ LG   +    T +  A+ D   CL   + +     YP+D +C       F Y+ +TLLV   V  V+       +Y R +  SV  AFV L  Y+  +W      + N+F   GL +++ G+  YH  PEP+    +    SP +G+
Sbjct:    7 ERLTFKLMVDRMAPFRFVLAQAVAACYAVAVGVVVL-RRVNLSGE-RGSMQGFPVWRLAMMAVLDMLHLVPMIVAAADVAPTLTVLLLQC-----------------SAPFCLAVS----GGFCSRRYPRKSVLGAAVIFLGACVAIYLPISRLINARATLHDDARSHEYDPVHLRGDSGDYAIVEGYNTILYVLACLPAAVSTVYKQYALEQHGRPVDAHQLSLGVTAFEVVFIALAAPAAYQLQFLGRHGD--GNTHVGQALRDGWRCLVLMRDVVDIDGYPVDAECWAGLPLVFSYVVATLLVNTLVQKVVDQAESASVYHRAMAFSVPTAFVALCFYNEAEW---LHDSFNVFTVSGLIVIMIGLRLYHSVPEPEDPRDSFDPPSPPDGK 372          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: GAX10479.1 (hypothetical protein FisN_21Lh177 [Fistulifera solaris])

HSP 1 Score: 108.2 bits (269), Expect = 6.600e-20
Identity = 107/432 (24.77%), Postives = 178/432 (41.20%), Query Frame = 0
Query:   65 LVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKK-MKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQAT-------------------------XXXXXXXXXXXXXXXSSSPFSPSITT------------------------GRGGGRKTKMFKNEHWQGGGLILLGIAVAMAPTVHA-----AFWHGH---RDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGM--GW-NTYAMTDLSTAVTDMCLCLFSG--QSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFS 434
            ++ L+ AGER  FK+ +D+  PFR+     V  +  L+ G++V+    +K PS  +      P   + ++ALLDTL ++++ V+G           +Q T                                         +S    S+TT                        G GG  K      EH  G  ++   +  A+ P          F +         INTL YV  C+PAA   L KE   ++F QP+N  YLNLLL  +QF++  V+SPL + LQGLG    W   Y  T  S   +D   C   G  ++    +YP    C ++ L    ++ S +LV  AV+ ++  G   ++YR +++ + ++ + +  Y MN   +     ++  +   L +++ G E YHR    D+   T ++
Sbjct:  101 ILALSYAGERSTFKLLVDRTAPFRLLTVEAVTGAHALLLGIIVMTGYFLKTPS--SKIKLGIPLIDVAIMALLDTLCILLVFVSGYRVPPTLTVILVQFTLPLTAFLTQFGHPDGLCSLTRKSDQDTRRTRNASNEDDGRHTSSTERSLTTSALYSLANETCTADSDLPPRTAVSGYGGLAK------EHVWGSLILFFAVMFALLPAFVTLIDPNEFMYADSIPTRTAINTLLYVSSCIPAAIVTLYKEHVFLQFKQPVNMNYLNLLLATFQFIVASVMSPLLFVLQGLGAHGDWTEQYPSTQFSENYSDGVQCFVGGLSETDQESKYPESAFCDYSLLLVLIHVTSVVLVGVAVDKIVNAGATKVMYRGVSAGIIVSVLCMHFYDMNIPDFNYGPVIDGLNLFCLILLILGSEVYHRVTLQDSTFETEYA 524          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: GAX16734.1 (hypothetical protein FisN_21Hh177 [Fistulifera solaris])

HSP 1 Score: 105.1 bits (261), Expect = 5.600e-19
Identity = 105/432 (24.31%), Postives = 179/432 (41.44%), Query Frame = 0
Query:   65 LVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKK-MKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFM---------------------------QATXXXXXXXXXXXXXXXSSSPFSPSIT----------------------TGRGGGRKTKMFKNEHWQGGGLILLGIAVAMAPTVHA-----AFWHGH---RDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGM--GW-NTYAMTDLSTAVTDMCLCLFS--GQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFS 434
            ++ L+ AGER  FK+ +D+  PFR+     V  +  L+ G++V+    +K PS  +      P   + ++ALLDTL ++++ V+G           +                           Q T               SS+  SP+ +                      +G GG  K      EH  G  ++   +  A+ P          F +         INTL YV  C+PAA   L KE   +++ QP+N  YLNLLL  +QF++  V+SPL + LQGLG    W   Y  T  S   +D   C      ++    +YP    C ++ L    ++ S +LV  AV+ ++  G   ++YR +++ + ++ + +  Y MN   +     ++  +   L +++ G E YHR    D+   T ++
Sbjct:  101 ILALSYAGERSTFKLLVDRTAPFRLLTVEAVTGAHALLLGIIVMTGYFLKTPS--SKIKLGIPLIDVGIMALLDTLCILLVFVSGYRVPPTLTVILVQFTLPLTAFLTQFGHPDGLCSLNRKSDQDTRRARNTSNGADGRHTSSTERSPTTSALSSLVNETCTADSDLPPRTAVSGYGGLAK------EHVWGSLILFFAVMFALLPAFVTLIDPNEFMYADSIPTRTAINTLLYVSSCVPAAIVTLYKEHVFLQYKQPVNMNYLNLLLATFQFIVASVMSPLLFVLQGLGAHGDWTEQYPSTQFSENYSDGVRCFVGRLSETDQESKYPESAFCDYSLLLVIIHVTSVVLVGVAVDKIVNAGATKVMYRGVSAGIIVSVLCMHFYDMNIPDFNYGPVIDGLNLFCLILLILGSEVYHRVTLQDSTFETEYA 524          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: XP_008606788.1 (hypothetical protein SDRG_02955 [Saprolegnia diclina VS20] >EQC39516.1 hypothetical protein SDRG_02955 [Saprolegnia diclina VS20])

HSP 1 Score: 96.7 bits (239), Expect = 2.000e-16
Identity = 89/374 (23.80%), Postives = 162/374 (43.32%), Query Frame = 0
Query:   59 LGGFIFLVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQATXXXXXXXXXXXXXXXSSSPFSPSITTGRGGGRKTKMFKNEHWQGGGLILLGIAVAMAPTVHAAF--WHGHRDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLT 431
            LGG +F++ LA   ER  FK+ +D+ME +R FL        +     +V Y K  Q   I   +  FP+   F++ +LD    +++ + G  T       F+QA+               ++  F+  +            +   H  GG +++ GI V + P         +  +++  N+L Y+L  +P A S L KE+A+   +QPM+ YYLN  + +YQF+  L+++PL + +  L +      +  L   V+++                   +C         ++   ++  F V  VL + +  +LY    +++ +AFV+L  Y  ++   ++S   + F      +VL G+  Y   PEP  E  T
Sbjct:   29 LGG-LFVLVLAEVTERFTFKLMLDRMESYRYFLMQMSTFLYIPPMFCIVGY-KATQSDFIDEEVTEFPKSKFFVMGMLDLAQSMLLFLPGGKTPATLTVIFLQAS-------------VPATMLFAQILLKDE--------YSKFHVLGGSIMMAGILVGLLPVFSMVLSDVYEEQEMAWNSLCYLLAAIPGALSVLYKEKALA--TQPMDVYYLNAWVAVYQFIGGLLVAPLAFDIPALHLDQRISGLECLVNGVSEI----------------RTDKCHLGLGLLLLFLVCKVVAFFGVGFVLQHTSVSVLYSGYTAALPMAFVLLEWYQQDQDGPLSSVWSDAF---SCAVVLLGLVLYRLNPEPGMEATT 358          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: XP_008876596.1 (hypothetical protein H310_11639 [Aphanomyces invadans] >ETV94651.1 hypothetical protein H310_11639 [Aphanomyces invadans])

HSP 1 Score: 96.3 bits (238), Expect = 2.600e-16
Identity = 94/380 (24.74%), Postives = 160/380 (42.11%), Query Frame = 0
Query:   61 GFIFLVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQATXXXXXXXXXXXXXXXSSSPFSPSITTGRGGGRKTKMFKNEHWQGGGLILLGIAVAMAP--TVHAAFWHGHRDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSY-ALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFSLSPE 438
            G +  + LA  GER  FK+ +D+ME +R FLA       +     +V Y K  Q   I   ++ FP++  F++A+LD L  +++ +   +T       F+QAT                  PFS       G    +  +      GG L+  G+ + + P   + A+      ++G ++L Y+L  +P A S L KE+A+    QPM+ YYLN  + +YQF+   +L+PL + +  L +      +            CL +G S          +C         ++   + + + V  V+ + +P +LY     +  L F VL  Y  +  A  +        D+L   +V  G+  +   PEP TE  T  +   E
Sbjct:   30 GAVAALMLADVGERFTFKLMVDRMESYRYFLAQITTFLYIPPMFCIVGY-KATQTDFIDEEVNEFPKYKFFIMAVLDLLHAMLLFIPAGNTPPALTVIFVQATV-----------------PFSMLF----GYLFHSYQYSRMQIVGGILMTSGLMLGILPLLLLLASDVFEEAEMGWHSLCYLLAAIPGALSMLYKEQALA--PQPMDVYYLNAWVAVYQFIGGFLLAPLIFDIPTLHLDQRISGLE-----------CLVNGSS-----EVRTDKCHMGLALLAAFLACKVGLFYGVGYVMNHTSPGVLYTAFTLAFPLGFFVLDTYQSSGQADDSDVTTARWMDYLSFMVVFLGLVVFRMTPEPSTEATTRSAAEKE 369          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: OQR89643.1 (Drug/Metabolite Transporter (DMT) Superfamily [Thraustotheca clavata])

HSP 1 Score: 95.9 bits (237), Expect = 3.400e-16
Identity = 90/377 (23.87%), Postives = 158/377 (41.91%), Query Frame = 0
Query:   57 SALGGFIFLVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQATXXXXXXXXXXXXXXXSSSPFSPSITTGRGGGRKTKMFKNEHWQGGGLILLGIAVAMAPTVHAAF--WHGHRDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYALNIF-DFLGLFIVLAGMERYHREPEPDTEMLT 431
            + LGG I L+  A   ER  FK+ +D+ME +R FL        +     +V Y K  Q   I   +  FP+   F++ +LD L  +++ + G  T        MQA                     S  IT         +++    + GG +IL+GI + + P            +++  N+  Y L  +P + S + KERA+   +QPM+ YYLN  + +YQF+  L+L+P+ + +  L +      +  L   V+++                   +C         ++ S ++    +  V  Y T  +LY +   ++ +AFV+LA+Y  +  A       +I+ +     +VL G+  Y   PE  +E  T
Sbjct:   62 AVLGGLIALIA-AEVTERFTFKLMVDRMESYRYFLMQMSTFLYIPPMFCIVGY-KATQSDFIDEEVTEFPKSKFFIMGMLDLLQSILIFLPGGRTPATLTVILMQA---------------------SIPITMFFAQILLKEVYTRYQYIGGSIILIGILIGLIPVFSMVMNDVFEEQEMAWNSFCYFLAAVPGSLSVIYKERALA--TQPMDVYYLNAWVAVYQFIGGLLLAPIAFDIPSLHLDQRISGLECLVNGVSEV----------------RTDKCHLGFGLLLLFLLSKVVTFLVLGFVFRYTTLSVLYGSYTMALPIAFVILAIYQSSDQANAIDSESSIWTNAFSCGVVLLGLILYRLSPEAGSEATT 397          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: OQR86037.1 (Drug/Metabolite Transporter (DMT) Superfamily [Achlya hypogyna])

HSP 1 Score: 93.6 bits (231), Expect = 1.700e-15
Identity = 102/385 (26.49%), Postives = 167/385 (43.38%), Query Frame = 0
Query:   59 LGGFIFLVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQATXXXXXXXXXXXXXXXSSSPFSPSITTGRGGGRKTKMFKNEHWQ-----GGGLILLGIAVAMAPTVHAAF--WHGHRDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQG----LGMG-WNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYALNIF-DFLGLFIVLAGMERYHREPEPDTEMLT 431
            LGG   LV LA   ER  FK+ +D+ME +R FL        +     +V Y K  Q   I   +  FP+   F++ +LD L  +++ +AG  T       FMQA                 S P +  +          ++F NE +      G  ++  G+ V + P            +++  N+  Y+L  +P A S L KERA+   +QPM+ YYLN  + +YQF+  L+L+PL + +      L MG    +    L   ++ +  CL +G S        D +C         ++   ++  F +  VL + +   LY +   ++ +AF+VLA Y ++  +   S   + + D +   IVL G+  Y   PEP  E  T
Sbjct:   29 LGGLAALV-LAEVTERFTFKLMLDRMESYRYFLMQMSTFLYIPPMFCIVGY-KATQSDFIDEEVTEFPKSKFFVMGMLDLLQSMLLYLAGGKTPATLTVVFMQA-----------------SIPMTMLL---------AQLFLNEEYSKYQVIGASIMSAGLLVGLVPVFSMVLSDVFEEQEMAWNSFCYLLAAIPGALSVLYKERALA--TQPMDVYYLNAWVAVYQFIGGLLLAPLAFDIPVPFPLLNMGPILLFQALHLDQRISGL-ECLVNGVS----EIRTD-KCHLGLGILVVFLLCKVVAFFGIGFVLRHTSVPTLYGSYVLALPIAFIVLAWYQVSGQSDQDSSLSSAWSDIVSCAIVLFGLVLYRLSPEPGMEATT 377          
BLAST of NO23G00470 vs. NCBI_GenBank
Match: ETL46087.1 (hypothetical protein L916_03979 [Phytophthora parasitica])

HSP 1 Score: 91.3 bits (225), Expect = 8.400e-15
Identity = 105/420 (25.00%), Postives = 183/420 (43.57%), Query Frame = 0
Query:   49 WCGQLSSNSALGGFIFLVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLVLVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGASTXXXXXXXFMQATXXXXXXXXXXXXXXXSSSPFSPSITTGRGGGRKTKMFKNEHWQGGGLILL--GIAVAMAP---TVHAAFWHGHRDIGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGWNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNK------------WAWI-TSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFSLSPEEGE-----EGEEE 446
            +C   + +    G I L+ +A + ER  FKV +D+ME +R FL  F+    +     +V YK   +       M  FP++  F++ LLD L  +++ +AG  T       FMQA                 S P S  ++    G R T+       Q  G++++  G+ +++ P    +H+  +   R+IG N++ Y+L  +P + S L KER I    QP++  YLN  + + QF+  L+++P+ +  + L +   T  +           +CL  G+S           C         Y+ S ++V   +  ++   +   +Y         +FVVLA Y ++               WI  S  +++F FL +F   AG   Y  +P+P+ E  T   LS E+ E     +GE++
Sbjct:   23 YCNATTQSLLSFGAILLLLVAMSSERFLFKVMVDRMESYRYFLCQFMTFLYIPPMFCIVSYKATHEDLMEDDGM-EFPKFHFFVMGLLDLLHGLMLFIAGGRTDPTQTLLFMQA-----------------SIPISACMSAAFFGVRYTRA------QVVGMLIITGGLILSLIPCIEDIHSKEFE-DREIGWNSVFYLLAAIPGSLSMLYKERVI--RDQPVDMSYLNAWVSVNQFIAGLLVAPIIFDAEFLHLDQKTSGL-----------MCLIQGES-----EVSTDHCYMGLPILLLYVLSNIVVNVLLLQLIRLTSVSTMYGCTLVGFLTSFVVLAWYQVDPDNFGIINLHDGLRNWIPPSVFVDVFAFLTIF---AGKVLYQWDPDPEVEATT---LSAEDKENMSLLDGEDD 393          
The following BLAST results are available for this feature:
BLAST of NO23G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 19
Match NameE-valueIdentityDescription
EWM22988.13.300e-12072.10hypothetical protein Naga_101129g2 [Nannochloropsi... [more]
XP_005854262.14.800e-5574.83hypothetical protein NGA_0180900 [Nannochloropsis ... [more]
CBN77280.18.100e-2628.68conserved unknown protein [Ectocarpus siliculosus][more]
GAX10479.16.600e-2024.77hypothetical protein FisN_21Lh177 [Fistulifera sol... [more]
GAX16734.15.600e-1924.31hypothetical protein FisN_21Hh177 [Fistulifera sol... [more]
XP_008606788.12.000e-1623.80hypothetical protein SDRG_02955 [Saprolegnia dicli... [more]
XP_008876596.12.600e-1624.74hypothetical protein H310_11639 [Aphanomyces invad... [more]
OQR89643.13.400e-1623.87Drug/Metabolite Transporter (DMT) Superfamily [Thr... [more]
OQR86037.11.700e-1526.49Drug/Metabolite Transporter (DMT) Superfamily [Ach... [more]
ETL46087.18.400e-1525.00hypothetical protein L916_03979 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00470.3NO23G00470.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00470.2NO23G00470.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00470.1NO23G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601857gene_8388Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101129g2gene7461Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00470.3NO23G00470.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00470.2NO23G00470.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00470.1NO23G00470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00470 ID=NO23G00470|Name=NO23G00470|organism=Nannochloropsis oceanica|type=gene|length=2764bp
AAATCTCGCCCTTGGAGTCCTCCTATGCGTGAGTGTTGGAAGCAAGAATG
GCTGTGAGTGTGACAGTGCACTACCAGGTAAGCTTTACAAGAAAGAGGCG
CAACCGCCAAGGCAGGAGTTCTACAACGCGAATGTGTTCGCCATTCGTGC
AGGCAGTATGGATGATTCCCCTCCGCCCCCCCCAAGTGGGAATGTACGCA
AAGCTCGCTCAAGAAGCACAAGCCAAGGACTTGCAAGAATTGTGCCCAGC
CATTGTCTCACCATTTGCCATCACAAATGCACAGGTTGGGTTCTTTCAGC
GTCTGCCTGCCCTTTCGCAAGCAAGCATTTTTAGGAGAACGCCAGCAGAA
GCATCAGGAAGAACAGGAGCTGGACCATTATTGGAGGGCAGAACGTAATG
CGTGGCGGATAAATTGAACTCAGGTCAAGAAAGCAGGACTAGGACCTGCG
CCACGGGCCTGCGGCAGCGTCAGCAGCAGCAGCAGCAGCAGCTGCAGCAG
TGCGAGAAGTAACCAACTAGCTGCAACAGAGCAGCAGCAGTGTTTTGAGT
AATACTTTAAAAACTGTTCAGGGAAAATGAGGGAATCCAAGTCTCTAGAC
CCTGGCAGCAACCGGCGGGGCAATTACGGGGGCCTCTCAATTGGgtgaga
aatgagggagaaagggagggaaggagggcgggagagagggaggaagggat
gagggtatgcatgacgtagctagacaattgagatgatgcagattggaaac
tctccatccagagaatcgctcatctgctctcaacatcccattcttggtct
ttggctttcgttcacatacacaacgcagGATGACGCCCTCCCCGCCGTCC
GTGATAATCAATGAAGTGGAAATGGCGCGCCAGGCCCGGAGAAGAAAGgt
aggtgatatggtaacaggcgctgcacattgatactccgatataggtagga
atttattcattacctttttccctccctccatttctttttcctttcatcca
tcttgtagAAATGGTGGTGCGGACAGTTGTCCTCCAACTCAGCCCTAGGT
GGCTTTATCTTCCTTGTCGGCCTCGCTGCAGCCGGAGAACGAATAGCCTT
CAAAGTAGCCATTGATCAAATGGAACCGTTCCGGGTGTTTCTCGCTCTCT
TTGTGAACCTCTCCTTGGTGCTGGTGTCAGGGGTGGTGGTGCTCTACAAG
AAGATGAAACAGCCCTCCGgtaggagcctccatttttttttcccgtcctc
cctccctccttccctctccttgctcaccgccttttgctcttgaaaggtct
cgggagagggattacgaaaacaactctcatcgctcccccttccctccatc
cctccctccttccccccctccacccccagAGATTACGCCTTCCATGCACC
GCTTTCCCCGCTGGTCCATCTTTCTCATCGCGCTTCTCGATACCTTGTCA
CTCGTCGTTATGGTGGTCGCCGGCGCCTCCACTCCTCCAGTTCTCACCGT
CCTCTTCATGCAAGCCACCATTCCCTTTATCATCCTCCTCTCCTCCTGCC
CTCCTCCCTCCTTCTCTTCCTCCCCCTTTTCCCCTTCTATTACAACGGGG
AGGGGGGGGGGGAGGAAGACCAAGATGTTCAAGAATGAGCACTGGCAAGG
AGGAGGGCTTATTTTGTTGGGGATTGCGGTGGCTATGGCCCCGACCGTCC
ACGCGGCGTTTTGGCACGGACATCGGGATATTGgtaacgatggagggagg
gagcgggagggctgctttcctactgaatgaatacctcatatcccctgtaa
gacatacgcaattataagaattttctgaattatcaatcaatctcaattcc
ttttctctcacttgtagGCATCAACACCCTTGCCTATGTCCTCTGCTGCC
TCCCTGCCGCATTTTCCCAGTTGGTCAAAGAGCGGGCCATCATCAAGTTC
TCCCAGCCTATGAACTTTTACTACCTAAATTTGCTGCTAGGCATCTATCA
ATTTGTGTTGCTTTTGGTCTTGTCCCCACTCACCTACAGGCTCCAGgtag
ggacagagggagggacggtgggagagaagggagggagaagattgcgagca
aggaggaaatgacgtgatttttttccttttatttattatatgtggtgtag
ttagccgctttatctaagaatgactctcatcgaaaatcaataatgcccca
tacagGGCCTGGGGATGGGCTGGAATACATACGCCATGACTGACTTGAGC
ACCGCTGTGACGGATATGTGCCTGTGTCTTTTTTCCGGTCAATCCATTCC
TCCGGGTCGCTATCCCATTGACCCCCAATGCCGCTTTGCATCCTTGGCGA
CATTTTTCTACATCTTTTCCACGCTTCTCGTGACCTTTGCGGTGAACGGC
GTGCTTGCCTACGGGACCCCTTTAATTTTGTACCGGACCATCAATTCGTC
TGTTGCCTTGGCCTTTGTGGTGCTTGCGCTCTATTCCATGAACAAATGGG
CGTGGATTACCTCGTATGCTCTCAACATATTTGATTTCTTGGGTCTCTTC
ATTGTCCTCGCAGGAATGGAGCGGTACCACAGGGAGCCGGAGCCAGATAC
AGAAATGTTGACGCACTTTTCGTTGTCGCCGGAAGAAGGGGAAGAGGGCG
AGGAGGAAGAGGTGTTCTAGACGAGAGAAAGACAAAAAGTGGATGGATGT
AGATAAATTTATCGATAACGTGAAAGAACACACGCAAAGGAACTTATGAA
ATTGAGACAAACGA
back to top

protein sequence of NO23G00470.3

>NO23G00470.3-protein ID=NO23G00470.3-protein|Name=NO23G00470.3|organism=Nannochloropsis oceanica|type=polypeptide|length=316bp
MRESKSLDPGSNRRGNYGGLSIGMTPSPPSVIINEVEMARQARRRKKWWC
GQLSSNSALGGFIFLVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLV
LVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGAS
TPPVLTVLFMQATIPFIILLSSCPPPSFSSSPFSPSITTGRGGGRKTKMF
KNEHWQGGGLILLGIAVAMAPTVHAAFWHGHRDIGINTLAYVLCCLPAAF
SQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQVGTEGG
TVGEKGGRRLRARRK*
back to top

protein sequence of NO23G00470.2

>NO23G00470.2-protein ID=NO23G00470.2-protein|Name=NO23G00470.2|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MEPFRVFLALFVNLSLVLVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLI
ALLDTLSLVVMVVAGASTPPVLTVLFMQATIPFIILLSSCPPPSFSSSPF
SPSITTGRGGGRKTKMFKNEHWQGGGLILLGIAVAMAPTVHAAFWHGHRD
IGINTLAYVLCCLPAAFSQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLL
LVLSPLTYRLQGLGMGWNTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPID
PQCRFASLATFFYIFSTLLVTFAVNGVLAYGTPLILYRTINSSVALAFVV
LALYSMNKWAWITSYALNIFDFLGLFIVLAGMERYHREPEPDTEMLTHFS
LSPEEGEEGEEEEVF*
back to top

protein sequence of NO23G00470.1

>NO23G00470.1-protein ID=NO23G00470.1-protein|Name=NO23G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bp
MRESKSLDPGSNRRGNYGGLSIGMTPSPPSVIINEVEMARQARRRKKWWC
GQLSSNSALGGFIFLVGLAAAGERIAFKVAIDQMEPFRVFLALFVNLSLV
LVSGVVVLYKKMKQPSEITPSMHRFPRWSIFLIALLDTLSLVVMVVAGAS
TPPVLTVLFMQATIPFIILLSSCPPPSFSSSPFSPSITTGRGGGRKTKMF
KNEHWQGGGLILLGIAVAMAPTVHAAFWHGHRDIGINTLAYVLCCLPAAF
SQLVKERAIIKFSQPMNFYYLNLLLGIYQFVLLLVLSPLTYRLQGLGMGW
NTYAMTDLSTAVTDMCLCLFSGQSIPPGRYPIDPQCRFASLATFFYIFST
LLVTFAVNGVLAYGTPLILYRTINSSVALAFVVLALYSMNKWAWITSYAL
NIFDFLGLFIVLAGMERYHREPEPDTEMLTHFSLSPEEGEEGEEEEVF*
back to top
Synonyms
Publications