NO23G00240, NO23G00240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO23G00240 vs. NCBI_GenBank
Match: OQR82304.1 (hypothetical protein ACHHYP_16244 [Achlya hypogyna]) HSP 1 Score: 160.6 bits (405), Expect = 1.100e-35 Identity = 101/255 (39.61%), Postives = 143/255 (56.08%), Query Frame = 0 Query: 10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKE-KAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGL 264 L +R A + E FDLGG EA+ ++ +AF+ PFE L +MVRLTFVVGGGK VR+RY + +PKW +NAL+ + F+ED+SAA + AG FK HDTG+NLK+I+VFP + P K G A A + I+S F ++ + PSW QK+R +K + E F +EAKM+RGE L +E A Y+ + ++ + K +K VD QLT ++K+ LL M +D L Sbjct: 4 LAGEIRLATENEQFDLGGYTEARTRDLVVAAFSAPFE-LPDMVRLTFVVGGGKLVRSRYPEELPKWMTNALREVGFVEDRSAACTMDCAGMFKQQHDTGQNLKTILVFPKMLA-------PTK----GKAASAPSATVVTIDDMPELQILSCDPDDFKALVRLELPSWRQKKRAVK-FIHDAMEEFALLEAKMVRGEILDAAEQAKYDGNAGAEANDAKVAHLQAEIKRMVDDKQLTASEKKELLATMTANVDAL 245
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_008880507.1 (hypothetical protein H310_14428 [Aphanomyces invadans] >ETV90871.1 hypothetical protein H310_14428 [Aphanomyces invadans]) HSP 1 Score: 160.2 bits (404), Expect = 1.400e-35 Identity = 100/256 (39.06%), Postives = 143/256 (55.86%), Query Frame = 0 Query: 8 HSLVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMT-SKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYE-ELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRID 262 H L +R AV +E FDLGG EA+ ++ +AF TP TEM+R TFVVGGGK VRARY + +PKW + AL+ + F+ED+S+A L S G +K DTG NL +I VFP +A A + E E++ A V + +S + F M+ +K SW QK+R LK L +Q AF+ +E K++RGE L E +Y+ + EK W +K VD+G LTKA+KE +L ++ ++ Sbjct: 5 HGLAGDIRQAVASEQFDLGGFTEARTRDLVVAAFGTPLTAPTEMIRFTFVVGGGKLVRARYSEQLPKWMTAALREVGFVEDRSSACTLDSQGTYKQQKDTGANLLTIQVFPRLALAPSSTYDCELEDKQAAVDV----------DSPEYLCISSDLETFQRMIVPAKARSWVQKKRLLKALQASMQ-AFQHLEEKLVRGENLLPVEQLMYDGNIGLEVNTEKCTWLQGEIKRMVDEGHLTKAEKEDVLATLQQNLE 249
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_008880508.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV90872.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 160.2 bits (404), Expect = 1.400e-35 Identity = 100/256 (39.06%), Postives = 143/256 (55.86%), Query Frame = 0 Query: 8 HSLVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMT-SKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYE-ELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRID 262 H L +R AV +E FDLGG EA+ ++ +AF TP TEM+R TFVVGGGK VRARY + +PKW + AL+ + F+ED+S+A L S G +K DTG NL +I VFP +A A + E E++ A V + +S + F M+ +K SW QK+R LK L +Q AF+ +E K++RGE L E +Y+ + EK W +K VD+G LTKA+KE +L ++ ++ Sbjct: 5 HGLAGDIRQAVASEQFDLGGFTEARTRDLVVAAFGTPLTAPTEMIRFTFVVGGGKLVRARYSEQLPKWMTAALREVGFVEDRSSACTLDSQGTYKQQKDTGANLLTIQVFPRLALAPSSTYDCELEDKQAAVDV----------DSPEYLCISSDLETFQRMIVPAKARSWVQKKRLLKALQASMQ-AFQHLEEKLVRGENLLPVEQLMYDGNIGLEVNTEKCTWLQGEIKRMVDEGHLTKAEKEDVLATLQQNLE 249
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_002297116.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86584.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 152.9 bits (385), Expect = 2.300e-33 Identity = 116/370 (31.35%), Postives = 184/370 (49.73%), Query Frame = 0 Query: 14 VRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLK--DLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGL--EKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRKHALLSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKASKKK 380 +R++ +++TFDLGG + + + + +AF++PF L +M+R+TFVVG GK RA+YD+ + ++ LK ++++ED+ A+ G FK HDTGKNLK++VVFP I+ G + +NE G + T I + + F +++++ CP++SQK++ L+ D LL L++A IE KMMRG L E A Y+ AS LKEK + VD+G+LT +K L+ E RI L EK L AL D KGRLL+++E K + + +E++I L E S G+FE ++ ++R + S+ K Sbjct: 15 IRSSTESDTFDLGGHSASNIETTIHAAFSSPFA-LDDMIRITFVVGAGKLGRAKYDEKAMQAVTSTLKSLDYVEDRGASCVKECGGSFKLQHDTGKNLKTVVVFPNISDVHGKEARKKTKNEEGEPLIP--------TNSPGYSIAVSNHSTFKNLLSNFCPTYSQKKQCLRCLDGLLQLEQA---IEEKMMRGNPLDSGEQAFYD--VASDLKEKIAHVKEEAGRHVDEGKLTIEEKNTLVSLNENRIKTLMNEKNSASVAEQLKKALARKEQLQSLTDDMLRMTASYPPPLRYESQINTLRKKLLPLQAL----EDSSKGRLLTLSETKALTGKEEIEQEIERLEEASYGWFEEEDAFRERIQQSRDK 366
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_002179900.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48886.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 152.1 bits (383), Expect = 3.900e-33 Identity = 117/368 (31.79%), Postives = 172/368 (46.74%), Query Frame = 0 Query: 10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFR-KHALLSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKAS 377 L +R AVD ETFDL G N + + + + AF F L E +RLTFV G GK R +YDD K ++ L+ + + ED AG FK HDTGKNLK++VV+P ++ +GG E EN A A ++A I S VF M+ SKCP+WSQK +G + ++ + +E K++ G LS+SE Y+ +S + L+EK + M AQVD G++T +K LL Q+ R+ L K R + A L + + KGRLL++ E + D ++E+I L S+G+FESD+ R +A+ Sbjct: 8 LAASIRRAVDNETFDLAGKNASTIENAVQDAFREAFA-LPETIRLTFVTGAGKLARQKYDDGAAKAITSPLRELGYQEDHG-----GGAGTFKLQHDTGKNLKTVVVYPHVSKSGG-----ESENTTQVATAALLAEDSA-----EYKIAYSSANVFQRMVESKCPTWSQK-KGCVAAVETVKSMVQVLETKLLTGTPLSESEQDFYDAVSITSLEEKLTLLKELMHAQVDTGKITSREKIELLAQVNDRLATLRKDIVEAESEGKAKRVDNLKNVQTKATARKEKLESISPQAPPLLKNILEINKLRTEMAPLLEMEENAKGRLLTLKESQAIGRKDEIQEEIEDLERSSRGWFESDDAFATRVEAA 358
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_002290118.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91870.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 151.8 bits (382), Expect = 5.200e-33 Identity = 113/365 (30.96%), Postives = 173/365 (47.40%), Query Frame = 0 Query: 14 VRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEEL-SASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRKHAL-LSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKAS 377 +R+A +++TFDL G + + + ++SAF PF NL+E++R+TFVVG GK R++YDD ++AL+ + ++ED+ A+ G FK HDTGKNL ++VVFP + G G E N GG + G ++ S A F M+ S PSWS+K + +LL + E ++ K+M G LSD E A Y+++ A + K E + M+ QV+ G LT ++ L+ Q+ R++GL +K L K KGRLL+V E K +E D L E+I L S+G+FE ++ R +AS Sbjct: 12 IRSATESDTFDLAGHSPSNIETTVTSAFTDPF-NLSEIIRITFVVGAGKLGRSKYDDKASLHVTSALRQLGYVEDRGASCVNECGGSFKTQHDTGKNLFTVVVFPKLVQEGDNG--GESNNTGGGNSMEYPIPIPLFEGSALHTVLLSSEATFEKMVPSMAPSWSEK-KFCSELLKDSLDTVEQMDGKLMTGTPLSDDEQAFYDDVGGALVIGSKLECIKKQMQQQVEAGALTADERNNLIHQVSERLEGLNDEIESALQKSQEKKVAKLNMQREKAEARRKMLVGHSPQPTHKLKHEDQIMTLKKRLQPLLKLEASAKGRLLTVKETKTLAEKDELLEEIEELELASQGWFEEEDVFMVRLEAS 372
BLAST of NO23G00240 vs. NCBI_GenBank
Match: OEU10280.1 (hypothetical protein FRACYDRAFT_247895 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 151.8 bits (382), Expect = 5.200e-33 Identity = 113/370 (30.54%), Postives = 169/370 (45.68%), Query Frame = 0 Query: 10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQAMKAQVD-KGQLTKADKERLLQQMEGRIDGLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRKH-ALLSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKASK 378 L H+R++ +++TFDL G N + +T + AF PF L M+R+TFV G GK R +YDD + ++ L+ F ED+ A+ G FK HDTGKNLK+IVVFP I G G +MI +++F ++++S+C SWSQK +G + +QE ++E ++M G L D+E ALY+ +S L EK AM Q++ G +T +++ LL Q+ R+ +E RK A L K DG KGRL+SV E + + D + E+I L + S+G+FE D R K S+ Sbjct: 5 LAAHIRSSTESDTFDLAGQNPSTITVNIEQAFKDPFP-LDSMIRITFVTGAGKLGRQKYDDGCARAVTSTLRSCGFEEDRGASCVRECGGFFKQQHDTGKNLKTIVVFPNIREIDDHG-XXXXXXXXXXXXXXXNLLLLFQPGSPEEMIALSPISMFSNLLSSRCQSWSQK-KGCNAAIANIQETISNLEQRLMEGVALDDNEQALYDVVSVDDLNEKHSIVKDAMHKQIEIDGDITIEEQKSLLGQVSDRLSIIEDDLNEAKTEKKTKKVEKLTIAKTKVEQREVMLKKISPKIPQRLKHQDEILELRKELAPLIKLEDGAKGRLMSVKETQTLARKDEILEEITELEDSSRGWFEDDVSFDLRVKRSR 371
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_008615417.1 (hypothetical protein SDRG_11165 [Saprolegnia diclina VS20] >EQC31244.1 hypothetical protein SDRG_11165 [Saprolegnia diclina VS20]) HSP 1 Score: 151.0 bits (380), Expect = 8.800e-33 Identity = 94/256 (36.72%), Postives = 144/256 (56.25%), Query Frame = 0 Query: 10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVF-PDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKE-KAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGL 264 L +RAA ++E FDLGG EA+ ++ +AF FE ++EM+R TFVVGGGK VR+RY + +PKW +NAL+ + F+ED+SAA + G FK HDTG+NLK+I+VFP + GG A +V +++S + F ++ + PSW QK+R +K + + E F +EAKM+RGE L +E A Y+ + + + K +K VD+ QLT ++K+ L+ + +D L Sbjct: 4 LAGEIRAATESEQFDLGGYTEARTRDLVVAAFGAAFE-ISEMLRFTFVVGGGKLVRSRYPEELPKWMANALRDVGFVEDRSAACTMDCQGMFKQQHDTGQNLKTILVFPKVVATA----------TGGKTAAAAPIAIPSVDETPELLMLSCEVDDFIKTLVPLELPSWRQKKRAVKFIQDAMAE-FALLEAKMVRGEILDAAEQAAYDGNAGQEANDAKIAHLQAEIKRMVDEKQLTASEKKELVATVTANVDAL 247
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_009845368.1 (hypothetical protein H257_18055 [Aphanomyces astaci] >ETV65163.1 hypothetical protein H257_18055 [Aphanomyces astaci]) HSP 1 Score: 151.0 bits (380), Expect = 8.800e-33 Identity = 96/256 (37.50%), Postives = 138/256 (53.91%), Query Frame = 0 Query: 8 HSLVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMT-SKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYE-ELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRID 262 H L +R AV E FDLGG E + ++ +AF TP TEM+R TF+VGGGK VRARY + +PKW + AL+ + F+ED+SAA L G +K DTG NL +I VFP + A G G E + E++ V + +S + F M+ +K SW QK+R LK L AF+ +E K+MRGE L E +Y+ + EK W +K VD+G LTKA+K+ ++ ++ ++ Sbjct: 5 HGLAGDIRQAVANEQFDLGGFTEPRTHDLIVAAFGTPLTAPTEMIRFTFIVGGGKLVRARYSEQLPKWMTAALREVGFVEDRSAACTLDCQGTYKQQKDTGANLLTIQVFPRLTLAVGTGGE-DLEDKPATVDV----------DSPEYLCISSDLETFQRMIVPAKARSWVQKKRFLK-ALQGSMTAFQHLEEKLMRGEALMPVEQLMYDGNIGLEVNTEKCVWLQGEIKRMVDEGHLTKAEKDEVIATLQQNLE 248
BLAST of NO23G00240 vs. NCBI_GenBank
Match: OQS04755.1 (hypothetical protein THRCLA_03028 [Thraustotheca clavata]) HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32 Identity = 93/251 (37.05%), Postives = 145/251 (57.77%), Query Frame = 0 Query: 14 VRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQA-MKAQVDKGQLTKADKERLLQQMEGRIDGL 264 +R ++E DLGG EA+ ++++AF+ PFE L EM+R TFVVGGGK VR++Y + +PKW + AL+ I F+ED+SAA G FK HDTG+NLK+I+VFP + EK+ A G +V +++S + F ++ + PSW+QK+R ++ + + E F +EAKM+RGE L+++E A Y+ + ++ QA +K VD G+LT +K+ L+ M +D L Sbjct: 4 LRQVTESEQVDLGGYTEARTRELVTAAFSEPFE-LNEMIRFTFVVGGGKLVRSKYPEELPKWMTGALRDIGFLEDRSAACTWDCQGTFKQQHDTGQNLKTILVFPKVV---------EKKASSAEQPAAKG---PSVQEIPELLLLSCDLEDFEKLLPLELPSWTQKKRAVRFIQDAMNE-FALLEAKMVRGEILTEAEQAQYDGNAGQEVNAAKLTRLQAEIKKHVDDGRLTANEKKELVATMTSNVDAL 240 The following BLAST results are available for this feature:
BLAST of NO23G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00240 ID=NO23G00240|Name=NO23G00240|organism=Nannochloropsis oceanica|type=gene|length=3706bpback to top protein sequence of NO23G00240.1 >NO23G00240.1-protein ID=NO23G00240.1-protein|Name=NO23G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bpback to top Synonyms
Publications
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