NO23G00220, NO23G00220 (gene) Nannochloropsis oceanica

Overview
NameNO23G00220
Unique NameNO23G00220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2766
Alignment locationchr23:93141..95906 +

Link to JBrowse

Properties
Property NameValue
DescriptionPatched family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:93141..95906 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032190NPC1_N
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO23G00220 vs. NCBI_GenBank
Match: CBJ25885.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 287.0 bits (733), Expect = 9.200e-74
Identity = 161/377 (42.71%), Postives = 208/377 (55.17%), Query Frame = 0
Query:   20 IIHLFPVTQAGQCVFRQTCINTGIDSPC--IPSLTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTD-ATGDCVEGIPDPTTGRCLTPSL------DLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTFGGPQGCTACAVNLVDMWCALICSPEQSSFARPHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSS-------------------------DPSLIPLLRPA-----------LDCASFFHPGTSDVPFPFPPPQEDIISCSCTYCAAACEGKGLTTV----ASPISPFSGFDSPLVLGVYLTLFVVAI 348
            ++ L P   AGQC F Q C   G+D+ C  IP+  D+ V         SFPMD +HGF + H  VW+G + + +TG C EG PD + GRC+   +      D+ PIVCP Y +  CC+W+QNY LY+NL  LV++FG   GC ACAVNLV+ WCAL+CSP+Q +FA  H+PP   RRDDLT          VLQ+DV +  D  C +Y+SCKS+  V + + MQSGLGLL +Q QTGAVGHGE+FF  FE ++S                         DP        A           L C SFF PG+S +PF +PP +EDIISC+C YC  AC G G   V     +PI    GF   LV GVY  +   ++
Sbjct:   30 LLLLLPTVDAGQCAFTQECFQFGLDTDCTPIPAEGDTAV---------SFPMDSSHGFGVFHDKVWDGSVENPSTGLCDEGRPD-SDGRCIVDFVAPKGLKDVAPIVCPQYKDSGCCSWQQNYALYQNLGLLVESFGSTTGCLACAVNLVNFWCALVCSPDQGAFASMHDPPFDQRRDDLTGGSSR-----VLQLDVNVDGDMACRIYESCKSIAVVGETTAMQSGLGLLKFQLQTGAVGHGEFFFPSFETNASAESPCGNKRLPVSGGLDVRATERKDDPQAAASAPTASSESSSMSFDTLACDSFFDPGSSTIPFAYPPKREDIISCTCDYCVQACSGGGSIDVDVSDKNPIPVLDGFGVGLVGGVYAAVVACSL 391          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: POM71156.1 (Hypothetical protein PHPALM_12310 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 163.7 bits (413), Expect = 1.200e-36
Identity = 117/363 (32.23%), Postives = 164/363 (45.18%), Query Frame = 0
Query:   11 VLLPPAVLFIIHLFPVTQAGQCVFRQTCINTGID---SPCIPSLTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTDAT-----GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTFG--GPQGCTACAVNLVDMWCALICSPEQSSFAR-PHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFE--KDSSDPSLIPLLRPALDCASFFH--------PGTSDVPFPFPPPQEDIISCSCTYCAAACE-----GKGLTTVASPISPFSGFDSPLVLGVYLTLFVVA 347
            +LL P  + ++    V    +CV  QTC+N   +     CIP      V +    A   +P           S +  G  T AT     G CV G       G    P  +   I CPAY +++CC+W+QN  + +N   +   FG     GC ACA NL+++WC L+CSPEQ  F +  H  PS   R D   T++E+V   VL+++V +  D+ CA++DSCK+    +  + M+S LG L YQ Q GAVGHGEY   HF   KD S           L C+++          P  + +         D   C C  C A C+     G  +  V  PIS  SGF + LV   Y  L + A
Sbjct:    1 MLLLPLFVMLLAAASVPSEAKCVMTQTCVNPDNEPDYDACIPEAHKEPV-DPQPMAGDGWP-----------SVIGGGSCTTATDCNGKGQCVHGACVCRRDGMAAGPHCNQFAIQCPAYKDNACCSWQQNQAMAENFKLVASVFGKNSAGGCDACAANLMNLWCGLVCSPEQDQFLQMAHQWPSINYRPD-PMTEKEKV--KVLELNVALAKDFTCAVFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYITMHFNATKDKS------FDYDVLKCSNYSEVVENRQSLPTQAQLLESITSKATDDKQCPCGACRATCDTHTSGGSHIHVVDDPISMLSGFSTKLVAAAYGLLVIFA 342          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: ETM32486.1 (hypothetical protein L914_20096 [Phytophthora parasitica] >ETO60938.1 hypothetical protein F444_20934 [Phytophthora parasitica P1976])

HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36
Identity = 118/366 (32.24%), Postives = 161/366 (43.99%), Query Frame = 0
Query:   15 PAVLFIIHLFPVTQAGQCVFRQTCINTGID---SPCIPSLTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTDAT-----GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTF--GGPQGCTACAVNLVDMWCALICSPEQSSFAR-PHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFP--------FPPPQEDIISCSCTYCAAACE-----GKGLTTVASPISPFSGFDSPLVLGVYLTLFVVAIIAVGYRQY 356
            P VL ++         +CV  QTC+N   +     CIP        E        +P           S V  G  T AT     G C+ G       G    P  +   I CPAY N++CC+W+QN  + +N   +   F      GC ACA NL+ +WC L+CSPEQ  F +  H+ PS   R D   T +E+V   VL+++V +  D  CA++DSCK+    +  + M+S LG L YQ Q GAVGHGEY    F   S D S        L C+++    T+    P              D   C C  C A C+     G  +  V  PIS FSGFD+ LV   Y  L V+      +++Y
Sbjct:    6 PLVLALLATASAPSEAKCVMTQTCVNPDNEPDYDACIPEAHKEPA-EPQPMTGDGWP-----------SVVGGGNCTSATDCSGKGQCINGACICRKDGMASGPHCEQFAIQCPAYKNNACCSWQQNQAMAENFKLVASVFAKNSAGGCDACAANLMSLWCGLVCSPEQDQFMQMAHDWPSINYRPD-PMTGKEKV--KVLELNVALAKDMTCAIFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYITMAFNA-SKDKSFD---HDVLKCSNYSEVVTTRETLPTQAQLLESIASKSTDDKQCPCGACRATCDTHTSSGSHIHVVDDPISVFSGFDTKLVAAAYGLLVVLVFSWTRWQRY 352          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: XP_008914520.1 (hypothetical protein PPTG_18160 [Phytophthora parasitica INRA-310] >ETN00156.1 hypothetical protein PPTG_18160 [Phytophthora parasitica INRA-310])

HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36
Identity = 118/366 (32.24%), Postives = 161/366 (43.99%), Query Frame = 0
Query:   15 PAVLFIIHLFPVTQAGQCVFRQTCINTGID---SPCIPSLTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTDAT-----GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTF--GGPQGCTACAVNLVDMWCALICSPEQSSFAR-PHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFP--------FPPPQEDIISCSCTYCAAACE-----GKGLTTVASPISPFSGFDSPLVLGVYLTLFVVAIIAVGYRQY 356
            P VL ++         +CV  QTC+N   +     CIP        E        +P           S V  G  T AT     G C+ G       G    P  +   I CPAY N++CC+W+QN  + +N   +   F      GC ACA NL+ +WC L+CSPEQ  F +  H+ PS   R D   T +E+V   VL+++V +  D  CA++DSCK+    +  + M+S LG L YQ Q GAVGHGEY    F   S D S        L C+++    T+    P              D   C C  C A C+     G  +  V  PIS FSGFD+ LV   Y  L V+      +++Y
Sbjct:    6 PLVLALLATASAPSEAKCVMTQTCVNPDNEPDYDACIPEAHKEPA-EPQPMTGDGWP-----------SVVGGGNCTSATDCSGKGQCINGACICRKDGMASGPHCEQFTIQCPAYKNNACCSWQQNQAMAENFKLVASVFAKNSAGGCDACAANLMSLWCGLVCSPEQDQFMQMAHDWPSINYRPD-PMTGKEKV--KVLELNVALAKDMTCAIFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYITMAFNA-SKDKSFD---HDVLKCSNYSEVVTTRETLPTQAQLLESIASKSTDDKQCPCGACRATCDTHTSSGSHIHVVDDPISVFSGFDTKLVAAAYGLLVVLVFSWTRWQRY 352          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: CCI40545.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36
Identity = 100/285 (35.09%), Postives = 141/285 (49.47%), Query Frame = 0
Query:   92 GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTFG--GPQGCTACAVNLVDMWCALICSPEQSSFARPHNPPSAI--RRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFPFPPPQE--DIIS-------CSCTYCAAAC------EGKGLTTVASPISPFSGFDSPLVLGVYLTLFVVAIIAVGYRQYQ 357
            G C+ G       G    P  D   I CP Y + +CC+WEQN  L +N   L   FG     GC ACA NL+ +WC LICSP QS+F + H+P  ++  R D +T TD       VL++D+ +  +  C+L+DSCKS   V+  + M+S LG L YQ QTGA+ HGEY F HF    +D          L C+++       V    P   +  D IS       C C  C A C        + + T A PIS + GF+  +V  VY  L ++ ++ + ++ YQ
Sbjct:   77 GQCIRGHCVCADDGMTAGPHCDQYSIQCPEYKDAACCSWEQNQGLAENFKLLSSVFGKNAAGGCDACASNLMMLWCGLICSPHQSNFMKMHSPYPSVHYRPDPMTGTDH----VKVLEMDISLQKELTCSLFDSCKSTAIVSMAAAMKSSLGFLNYQAQTGAIAHGEYLFLHF----NDTVPHAFDHSVLSCSNYSIVENDTVRQSLPQQAQRLDSISSKNAIKQCPCGSCQATCSAHNSNSSRPIITTAKPISIWDGFNFRVVGAVY-ALVLILVVMLKWKDYQ 352          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: CCI40546.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36
Identity = 100/285 (35.09%), Postives = 141/285 (49.47%), Query Frame = 0
Query:   92 GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTFG--GPQGCTACAVNLVDMWCALICSPEQSSFARPHNPPSAI--RRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFPFPPPQE--DIIS-------CSCTYCAAAC------EGKGLTTVASPISPFSGFDSPLVLGVYLTLFVVAIIAVGYRQYQ 357
            G C+ G       G    P  D   I CP Y + +CC+WEQN  L +N   L   FG     GC ACA NL+ +WC LICSP QS+F + H+P  ++  R D +T TD       VL++D+ +  +  C+L+DSCKS   V+  + M+S LG L YQ QTGA+ HGEY F HF    +D          L C+++       V    P   +  D IS       C C  C A C        + + T A PIS + GF+  +V  VY  L ++ ++ + ++ YQ
Sbjct:   75 GQCIRGHCVCADDGMTAGPHCDQYSIQCPEYKDAACCSWEQNQGLAENFKLLSSVFGKNAAGGCDACASNLMMLWCGLICSPHQSNFMKMHSPYPSVHYRPDPMTGTDH----VKVLEMDISLQKELTCSLFDSCKSTAIVSMAAAMKSSLGFLNYQAQTGAIAHGEYLFLHF----NDTVPHAFDHSVLSCSNYSIVENDTVRQSLPQQAQRLDSISSKNAIKQCPCGSCQATCSAHNSNSSRPIITTAKPISIWDGFNFRVVGAVY-ALVLILVVMLKWKDYQ 350          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: XP_002998877.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69023.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 161.0 bits (406), Expect = 7.600e-36
Identity = 116/361 (32.13%), Postives = 160/361 (44.32%), Query Frame = 0
Query:   11 VLLPPAVLFIIHLFPVTQAGQCVFRQTCINTGID---SPCIPSLTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTDAT-----GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTFG--GPQGCTACAVNLVDMWCALICSPEQSSFAR-PHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFH--------PGTSDVPFPFPPPQEDIISCSCTYCAAACE-----GKGLTTVASPISPFSGFDSPLVLGVYLTLFVVA 347
            ++L P +L ++         +CV  QTC+N   +     CIP        E  +     +P           S V  G  T AT     G C+ G       G    P  D   I CPAY + +CC+W+QN  + +N   +   FG     GC ACA NL+ +WC L+CSPEQ  F +  H  PS   R D   T +E+V   VL+++V +  D  CA++DSCK+    +  + M+S LG L YQ Q GAVGHGEY    F   S D S        L C+++          P  + +         D   C C  C A C+     G     V  PIS F+GFD+ LV   Y  L ++A
Sbjct:    1 MVLFPLLLMLLATASAPSEAKCVMTQTCVNPDNEPDYDKCIPEAHKGPA-EPQSMTGDGWP-----------SVVGGGNCTTATDCSGKGQCISGACVCRRDGMAAGPHCDQFIIQCPAYKDSACCSWQQNQAMAENFKLVASVFGKNSAGGCDACAANLMSLWCGLVCSPEQDQFMQMAHEWPSNNYRPD-PMTGKEKV--KVLELNVSLAKDMTCAIFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYITMAFNA-SKDQSFD---HDVLKCSNYSEVAGIRETLPSQAQLLESIASKSTDDKQCPCGACRATCDTHTSSGSHTHVVDDPISVFAGFDTKLVAAAYGLLVILA 342          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: ETK72566.1 (hypothetical protein L915_20334 [Phytophthora parasitica] >ETL26023.1 hypothetical protein L916_20198 [Phytophthora parasitica] >ETL79234.1 hypothetical protein L917_20072 [Phytophthora parasitica] >ETP02064.1 hypothetical protein F441_20780 [Phytophthora parasitica CJ01A1] >ETP30224.1 hypothetical protein F442_20715 [Phytophthora parasitica P10297])

HSP 1 Score: 160.6 bits (405), Expect = 1.000e-35
Identity = 117/366 (31.97%), Postives = 161/366 (43.99%), Query Frame = 0
Query:   15 PAVLFIIHLFPVTQAGQCVFRQTCINTGID---SPCIPSLTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTDAT-----GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTF--GGPQGCTACAVNLVDMWCALICSPEQSSFAR-PHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFP--------FPPPQEDIISCSCTYCAAACE-----GKGLTTVASPISPFSGFDSPLVLGVYLTLFVVAIIAVGYRQY 356
            P VL ++         +CV  QTC+N   +     CIP        E        +P           S V  G  T AT     G C+ G       G    P  +   I CPAY +++CC+W+QN  + +N   +   F      GC ACA NL+ +WC L+CSPEQ  F +  H+ PS   R D   T +E+V   VL+++V +  D  CA++DSCK+    +  + M+S LG L YQ Q GAVGHGEY    F   S D S        L C+++    T+    P              D   C C  C A C+     G  +  V  PIS FSGFD+ LV   Y  L V+      +++Y
Sbjct:    6 PLVLALLATASAPSEAKCVMTQTCVNPDNEPDYDACIPEAHKEPA-EPQPMTGDGWP-----------SVVGGGNCTSATDCSGKGQCINGACICRKDGMASGPHCEQFIIQCPAYKDNACCSWQQNQAMAENFKLVASVFAKNSAGGCDACAANLMSLWCGLVCSPEQDQFMQMAHDWPSINYRPD-PMTGKEKV--KVLELNVALAKDMTCAIFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYITMAFNA-SKDKSFD---HDVLKCSNYSEVVTTRETLPTQAQLLESIASKSTDDKQCPCGACRATCDTHTSSGSHIHVVDDPISVFSGFDTKLVAAAYGLLVVLVFSWTRWQRY 352          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: ETI32201.1 (hypothetical protein F443_20920 [Phytophthora parasitica P1569])

HSP 1 Score: 160.2 bits (404), Expect = 1.300e-35
Identity = 117/366 (31.97%), Postives = 163/366 (44.54%), Query Frame = 0
Query:   15 PAVLFIIHLFPVTQAGQCVFRQTCINTGID---SPCIPSLTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTDAT-----GDCVEG-IPDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTF--GGPQGCTACAVNLVDMWCALICSPEQSSFAR-PHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFPFPPPQEDIIS--------CSCTYCAAACE-----GKGLTTVASPISPFSGFDSPLVLGVYLTLFVVAIIAVGYRQY 356
            P VL ++         +CV  QTC+N   +     CIP        E        +P           S V  G  T AT     G C+ G       G    P  +   I CPAY +++CC+W+QN  + +N   +   F      GC ACA NL+ +WC L+CSPEQ  F +  H+ PS   R D   T +E+V   VL+++V +  D  CA++DSCK+    +  + M+S LG L YQ Q GAVGHGEY    F   S D S        L C+++    T+    P      + I+        C C  C A C+     G  +  V  PIS FSGFD+ LV   Y  L V+      +++Y
Sbjct:    6 PLVLALLATASAPSEAKCVMTQTCVNPDNEPDYDACIPEAHKEPA-EPQPMTGDGWP-----------SVVGGGNCTSATDCSGKGQCINGACICRKDGMASGPHCEQFIIQCPAYKDNACCSWQQNQAMAENFKLVASVFAKNSAGGCDACAANLMSLWCGLVCSPEQDQFMQMAHDWPSINYRPD-PMTGKEKV--KVLELNVALAKDMTCAIFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYITMAFNA-SKDKSFD---HDVLKCSNYSEVVTTRETLPTQAQLLESIASKLTDDKQCPCGACRATCDTHTSSGSHIHVVDDPISVFSGFDTKLVAAAYGLLVVLVFSWTRWQRY 352          
BLAST of NO23G00220 vs. NCBI_GenBank
Match: XP_024586801.1 (Cholesterol transport protein (Niemann-Pick C disease protein) [Plasmopara halstedii] >CEG50432.1 Cholesterol transport protein (Niemann-Pick C disease protein) [Plasmopara halstedii])

HSP 1 Score: 159.1 bits (401), Expect = 2.900e-35
Identity = 110/352 (31.25%), Postives = 167/352 (47.44%), Query Frame = 0
Query:   17 VLFIIHLFPVTQAGQCVFRQTCINTGID---SPCIPSLTDSTVFENGTFANSSFPMDEAHGF--LMPHSDVWNGYMTDATGDCVEGI-PDPTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTF--GGPQGCTACAVNLVDMWCALICSPEQSSFAR-PHNPPSAIRRDDLTSTDEEEVLAPVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVGHGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFPFPPPQEDIIS--------CSCTYCAAACE-----GKGLTTVASPISPFSGFDSPLVLGVY--LTLFV 345
            ++ ++ +F  T   +CV  QTC+N   +     CIP      V         S PM   +G+  ++   +       ++ G C+ G+      G    P  + + I CPAY ND+CC+W+QNY + +N   L   F      GC ACA NL+ +WC LICSP Q  F    +  PS   R D   T +E+V   VL+++V +  +Y C ++DSCK+    +  +GM+S LG L YQ Q GAVGHGE+    F + +            L+C+++     +    P      + I+        C C  C A C+     G  +  V +PIS F+GF++ LV  VY  L +FV
Sbjct:    4 LILVLVVFLNTVEAKCVMTQTCLNPENEPDYDACIPEAYKIPV--------DSLPM-TGNGWPSVIGGGNCTTNIECNSKGHCINGMCVCRHDGMAAGPHCNQIAIQCPAYKNDACCSWQQNYAMAENFKLLASVFAKNNAGGCDACAANLMSLWCGLICSPFQDKFMHMTYEWPSITYRPD-PMTGKEKV--KVLEVNVALTKNYTCGIFDSCKNTAMASMAAGMKSSLGFLNYQMQVGAVGHGEFITLVFNQSTQQ----SFHHDILECSNYSEIIETREILPIQAQLLETIASKSKNDKQCPCGACRATCDTHKSNGTSIHVVENPISVFTGFNTKLVAIVYGLLVIFV 339          
The following BLAST results are available for this feature:
BLAST of NO23G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ25885.19.200e-7442.71conserved unknown protein [Ectocarpus siliculosus][more]
POM71156.11.200e-3632.23Hypothetical protein PHPALM_12310 [Phytophthora pa... [more]
ETM32486.11.500e-3632.24hypothetical protein L914_20096 [Phytophthora para... [more]
XP_008914520.11.500e-3632.24hypothetical protein PPTG_18160 [Phytophthora para... [more]
CCI40545.11.500e-3635.09unnamed protein product [Albugo candida][more]
CCI40546.11.500e-3635.09unnamed protein product [Albugo candida][more]
XP_002998877.17.600e-3632.13conserved hypothetical protein [Phytophthora infes... [more]
ETK72566.11.000e-3531.97hypothetical protein L915_20334 [Phytophthora para... [more]
ETI32201.11.300e-3531.97hypothetical protein F443_20920 [Phytophthora para... [more]
XP_024586801.12.900e-3531.25Cholesterol transport protein (Niemann-Pick C dise... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00220.1NO23G00220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601725gene_8360Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00220.1NO23G00220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00220 ID=NO23G00220|Name=NO23G00220|organism=Nannochloropsis oceanica|type=gene|length=2766bp
ATGATAATCAGAGTAGGGAGGTCGCGCGCCGTCCTCCTCCCCCCTGCCGT
CCTCTTTATTATACATCTCTTTCCCGTCACACAAGCGGGGCAATGCGTCT
TTCGACAGgtttgtacttgtgatgcatgctttctttgtatatgctagtac
agcacaacccattctaggcctgccctccccccctccctcccttcctcccc
cgacagACCTGCATCAACACAGGCATCGACTCGCCTTGCATCCCGTCCTT
GACAGATTCGACGGTTTTTGAAAATGGgtaagtgcatgagggaagacacg
gagagacgggaaaacttacagcatgaaagctcatcctcattccctctccc
tccttccctccctctctccctctctccttcactggctctctcctttccat
cacagGACATTTGCCAACAGCTCTTTCCCGATGGATGAAGCACATGGCTT
CCTCATGCCGCATTCGGACGTGTGGAACGGCTACATGACTGACGCCACAG
GGGATTGTGTGGAAGGGgtagggagggagggagcgagggagggagggagc
gagggagggagggaaaggaggagaggcctgcagcccatggacggtatctt
ttgtcgagtccttcccccctccctccctccctccctccctcccccacagA
TTCCCGACCCCACCACCGGCCGTTGCCTCACGCCCTCCCTCGATCTGGTC
CCTATAGTCTGTCCTGCGTATACCAACGACTCGTGCTGCACGTGGGAGCA
GAATTACATCCTCTACAAAAACCTGCACACCCTGGTCAAGACgtatgtag
ccctccatccctccctctttccttcttgccctttaaacatcgtccatgac
gcgtagatctcacaagccctccctccctccctccctcagCTTCGGCGGTC
CTCAAGGCTGCACGGCCTGCGCCGTCAATCTTGTGGATATGTGGTGTGCT
CTCATCTGCAGTCCTGAACAGgtagggatggatggagggagggaggaggg
aggatcggtttagcttctcctcccacactcacctacctccctccctcgtt
ccctccctccttccagTCCTCCTTCGCTCGGCCTCATAACCCTCCCTCAG
CCATCCGGCGCGACGACCTGACCAGCACGGATGAGGAGGAGgtgaaggag
gaaggaagggagggagggagggagggagggagggagggagggagggaggg
aagaataacctcatcaaacgccctacaacgaaaaaagtggtcgaaattcc
catgtaccctcccccctccctccacccctccctccctccctccctccctc
cctccctgcccaagGTCCTTGCCCCTGTTCTTCAGATAGACGTTTGGATG
ATGCCTGACTATGTTTGTGCCCTCTACGACAGCTGCAAGAGCGTCAACGC
TGTGGCGCAGgtacgccctgcctccctccctccctccctccctccttccc
ttcctccctccttcgactccatcaccccccctcctccccctcctcctccc
acagGTCTCCGGCATGCAATCAGGCCTCGGCCTCCTCACCTACCAGGGGC
AAACAGGCGCCGTCGGACACGGAGAGTATTTCTTCTTCCACTTCGgtatg
catgccttctctcccttccaccctccctccctcccttccactcattatca
gtctgccccttcagtcaccaacattcgtcactccctccttccctcccttc
cctcccttccctccctcccatcctcccttccagAGAAAGACTCCAGCGAT
CCCTCCCTCATTCCCCTCCTCCGTCCCGCCCTCGACTGCGCCTCCTTCTT
CCACCCGGGGACCTCAGATGTGCCATTCCCTTTCCCCCCCCCTCAGGAAG
ACATCATCTCGTGCAGgtaatcgccctccctccctccctccttcccttct
tccactcccgggaccacagaatagtccaccagtgaagaggaggagggagg
gagggagggcgtgatgatgagagggagggagaggaagaatagcatccaat
ttgaatgggctcacctgaccccgatccctccctccctccctccctccctc
cctccctagCTGCACCTACTGCGCTGCTGCGTGTGAGGGAAAGGGTCTCA
CCACTGTGGCATCTCCCATCTCTCCCTTCTCAGGCTTTGACTCTCCCCTG
GTGCTGgtaatacaaggaggggatagggggggtggggaggagggagggag
ggagggagggagggagggagggagggagggagtgctccggaggccgtgac
ttttccctctctctcccatcgcttggtgctgatgaggagggaggaggaga
ggaagggtgctgatgaggagggaggaggagaggaagggtgctgatgagga
gggaggcaggaaacgcggctagcaagatgactcgatggagctcaccttca
tataccgtcctccctctttccctccctctttccattccttctctctttca
ttccctatttccctccctcttttcctccctccgtagGGCGTCTATCTCAC
CCTTTTTGTCGTGGCTATCATCGCCGTGGGCTATCGTCAATATCAAAGGA
GAAATAAAGGGAGGGAGAGAGgtatgaattaagggtggagggagggagga
agggagggagggaaagggcatgggtactaacggatttatgtcacattccc
acatacacatagGACTGTCGGCTTCACTTTTAGGAAATGAGGTCTTTGAG
CACGAGGAGGAGGAGGAGGACGAGGAGGAGGAAGAGGAGGAGGAGGAGGA
GGAGGGTGGAGGGTGA
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protein sequence of NO23G00220.1

>NO23G00220.1-protein ID=NO23G00220.1-protein|Name=NO23G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=399bp
MIIRVGRSRAVLLPPAVLFIIHLFPVTQAGQCVFRQTCINTGIDSPCIPS
LTDSTVFENGTFANSSFPMDEAHGFLMPHSDVWNGYMTDATGDCVEGIPD
PTTGRCLTPSLDLVPIVCPAYTNDSCCTWEQNYILYKNLHTLVKTFGGPQ
GCTACAVNLVDMWCALICSPEQSSFARPHNPPSAIRRDDLTSTDEEEVLA
PVLQIDVWMMPDYVCALYDSCKSVNAVAQVSGMQSGLGLLTYQGQTGAVG
HGEYFFFHFEKDSSDPSLIPLLRPALDCASFFHPGTSDVPFPFPPPQEDI
ISCSCTYCAAACEGKGLTTVASPISPFSGFDSPLVLGVYLTLFVVAIIAV
GYRQYQRRNKGRERGLSASLLGNEVFEHEEEEEDEEEEEEEEEEEGGG*
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