NO22G02200, NO22G02200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G02200 vs. NCBI_GenBank
Match: XP_002896617.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY66899.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 87.0 bits (214), Expect = 2.300e-13 Identity = 52/157 (33.12%), Postives = 74/157 (47.13%), Query Frame = 0 Query: 15 WVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSSSSQGQGAPAVSAFVALNPRDQAYGKEGVFIRSACYKPPPSSRLAALTA 172 W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y R S+ S + +G Y ++G + S+ Y P + AA A Sbjct: 803 WAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPTHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYT-RESSTLSFEYEGV--------------TYHRDGQYSHSSMYVSPAAMAAAATMA 936
BLAST of NO22G02200 vs. NCBI_GenBank
Match: POM62474.1 (Chromodomain-helicase-DNA-binding protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 86.3 bits (212), Expect = 4.000e-13 Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSS 124 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y + S Sbjct: 864 NSAGVKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYTSESSTHS 975
BLAST of NO22G02200 vs. NCBI_GenBank
Match: POM68795.1 (Chromodomain-helicase-DNA-binding protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 86.3 bits (212), Expect = 4.000e-13 Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSS 124 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y + S Sbjct: 861 NSAGVKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYTSESSTHS 972
BLAST of NO22G02200 vs. NCBI_GenBank
Match: OWZ08947.1 (hypothetical protein PHMEG_00018432, partial [Phytophthora megakarya]) HSP 1 Score: 85.9 bits (211), Expect = 5.200e-13 Identity = 59/203 (29.06%), Postives = 89/203 (43.84%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSSSSQGQGAPAVSAFVALNPRDQAYGKEGVFIRSACYKPPPSSRLAALTALPSQGLLEGARRMYGKAAKEAWTAVGPSTALGEAT 207 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y S+ S + +G Y ++G + S+ Y P AA+ A + G+ R+ + T G A+ AT Sbjct: 554 NSAGIKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTRRGKLSYSELLYGSTGQLRKAYTSE-SSTHSFEYEGV--------------TYHRDGQYKNSSMYVSP-----AAMAAAATMAGWGGSDRVTRETCCSNETNAGKVDAIAAAT 728
BLAST of NO22G02200 vs. NCBI_GenBank
Match: XP_009533016.1 (hypothetical protein PHYSODRAFT_563400 [Phytophthora sojae] >EGZ12683.1 hypothetical protein PHYSODRAFT_563400 [Phytophthora sojae]) HSP 1 Score: 85.1 bits (209), Expect = 8.800e-13 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 0 Query: 15 WVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSS 124 W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y + S Sbjct: 874 WAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPVPLPPHPGSQWHKGGHKG--------QRPRRGKLSYSELLYGSTGQLRKAYTAESSTQS 974
BLAST of NO22G02200 vs. NCBI_GenBank
Match: ETI57662.1 (hypothetical protein F443_00064 [Phytophthora parasitica P1569] >ETI57663.1 hypothetical protein, variant [Phytophthora parasitica P1569]) HSP 1 Score: 85.1 bits (209), Expect = 8.800e-13 Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSSSSQGQGAPAVSAFVALNPRDQAYGKEGVFIRSACYKPPPSSRLAALTA 172 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y R S+ S + +G Y ++ + S+ Y P + AA A Sbjct: 858 TSSGIKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYT-RESSTLSFEYEGV--------------TYHRDDQYKHSSMYVSPAAMAAAATMA 1002
BLAST of NO22G02200 vs. NCBI_GenBank
Match: ETK97376.1 (hypothetical protein L915_00062 [Phytophthora parasitica] >ETK97377.1 hypothetical protein, variant [Phytophthora parasitica] >ETL50731.1 hypothetical protein L916_00060 [Phytophthora parasitica] >ETL50732.1 hypothetical protein, variant [Phytophthora parasitica] >ETM03764.1 hypothetical protein L917_00052 [Phytophthora parasitica] >ETM03765.1 hypothetical protein, variant [Phytophthora parasitica] >ETM57061.1 hypothetical protein L914_00053 [Phytophthora parasitica] >ETM57062.1 hypothetical protein, variant [Phytophthora parasitica] >ETO86394.1 hypothetical protein F444_00057 [Phytophthora parasitica P1976] >ETO86395.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP27445.1 hypothetical protein F441_00063 [Phytophthora parasitica CJ01A1] >ETP27446.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 85.1 bits (209), Expect = 8.800e-13 Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSSSSQGQGAPAVSAFVALNPRDQAYGKEGVFIRSACYKPPPSSRLAALTA 172 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y R S+ S + +G Y ++ + S+ Y P + AA A Sbjct: 858 TSSGIKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYT-RESSTLSFEYEGV--------------TYHRDDQYKHSSMYVSPAAMAAAATMA 1002
BLAST of NO22G02200 vs. NCBI_GenBank
Match: XP_008889665.1 (hypothetical protein PPTG_00048 [Phytophthora parasitica INRA-310] >XP_008889666.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETN23451.1 hypothetical protein PPTG_00048 [Phytophthora parasitica INRA-310] >ETN23452.1 hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 85.1 bits (209), Expect = 8.800e-13 Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSSSSQGQGAPAVSAFVALNPRDQAYGKEGVFIRSACYKPPPSSRLAALTA 172 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y R S+ S + +G Y ++ + S+ Y P + AA A Sbjct: 858 TSSGIKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYT-RESSTLSFEYEGV--------------TYHRDDQYKHSSMYVSPAAMAAAATMA 1002
BLAST of NO22G02200 vs. NCBI_GenBank
Match: KUF79507.1 (Histone-lysine N-methyltransferase [Phytophthora nicotianae]) HSP 1 Score: 85.1 bits (209), Expect = 8.800e-13 Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSSSSQGQGAPAVSAFVALNPRDQAYGKEGVFIRSACYKPPPSSRLAALTA 172 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y R S+ S + +G Y ++ + S+ Y P + AA A Sbjct: 834 TSSGIKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYT-RESSTLSFEYEGV--------------TYHRDDQYKHSSMYVSPAAMAAAATMA 978
BLAST of NO22G02200 vs. NCBI_GenBank
Match: KUF89605.1 (Sec14 cytosolic factor [Phytophthora nicotianae]) HSP 1 Score: 85.1 bits (209), Expect = 8.800e-13 Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = 0 Query: 4 SQGGNEAKEVAWVECERCSKWRKLPDLVNPESLPDKWYCEMNRWDRERNHCNAPEERYTESSALSAASRGDMHQGGGGGSYFLGGANQGRPSNKLSWRDMIFGSDGRVRAQYAERGGSSSSSQGQGAPAVSAFVALNPRDQAYGKEGVFIRSACYKPPPSSRLAALTA 172 + G + + W +CE+C+KWRKLP + +LPDKWYC MN WD C+ PEE E L H+GG G Q KLS+ ++++GS G++R Y R S+ S + +G Y ++ + S+ Y P + AA A Sbjct: 742 TSSGIKKTVLEWAQCEKCNKWRKLPQHIKSSTLPDKWYCSMNHWDPSHAKCSVPEEADQEPLPLPPHPGSQWHKGGHKG--------QRTKRGKLSYSELLYGSTGQLRKAYT-RESSTLSFEYEGV--------------TYHRDDQYKHSSMYVSPAAMAAAATMA 886 The following BLAST results are available for this feature:
BLAST of NO22G02200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G02200 ID=NO22G02200|Name=NO22G02200|organism=Nannochloropsis oceanica|type=gene|length=3347bpback to top protein sequence of NO22G02200.1 >NO22G02200.1-protein ID=NO22G02200.1-protein|Name=NO22G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bpback to top Synonyms
Publications
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