NO22G02130, NO22G02130 (gene) Nannochloropsis oceanica

Overview
NameNO22G02130
Unique NameNO22G02130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3251
Alignment locationchr22:660540..663790 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:660540..663790 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR104ngnoR104Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G02130.1NO22G02130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|567327gene_7228Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G02130.1NO22G02130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G02130 ID=NO22G02130|Name=NO22G02130|organism=Nannochloropsis oceanica|type=gene|length=3251bp
ACGAAGCTTTCGCCTTATGTTCTCGCGGGATTTCGGGGATCACTACAATC
TCTCGCGCCCTCTTCTCTGCCTTTGCCTTTGCCTTTGGTTGCTACGATAG
GCACAAGGGCGGGAACGCCTGGCCTGCGGGACTTTCCCGTGCCACTATCT
TGCCTTGTATCCACGTACATTCGCCTCCAGAGTCCTACTTAGTCACTTGT
ACCTCTTTCTTTTGCCCTTCGCAACACAGGCCCGCCCGCTATCTTTCTCC
TTCGCGCGCCGACCACAGACCAACCAAGAAGGCTGGTGATGATTTGGACT
CGAGGCCTCCCGCTTCCCGTCGTCCGCCCGCCCTTGTCCATGCTGCAGGC
CAAGAGTCTGGTGAATCATTGCTTGGGTCATGGAGAAGTGATTCATAAGC
CTGCCAGGCGTGTGGACCTTCGACACCTTTTGTGCCGAGAGCAAGGGAAT
GGCAGGAAGAGCGCCTGCTGATAACTTTTCGGTCTCGCGGAGAGTTGGAA
CCGAGGGTGCATTTGCCCCACATTGTCGTTTGTGCTCATTTTGACCGCTT
TTTCGCCCAGGTCTTCGGTCACATTCTCCACACACACAGCTGAAGAGGGA
AGGAGGATGGGCAGCAGGGTAGGAGCGGCCCTTGGGGTAGAAAAGGGGGG
GGAGAAAAAGAGGGAGGTAAAGGGCTTTGGGCCATGCTGCCTGACTCTTC
CCTTGCTGTTGGCCATGGCCGACCGTTCCTGCCCACCCCCTCCACCCGCA
CAATTGCCGGGCCTTTGTGTCACTTCTCCTGTATGCGGAGAGAGAGGACG
AAGACATGGAGGAGGAGCGATGCTGACTCCGCCTATGTTTTGGCTTACCA
CTGGTTGTTCACCATGAAAAAGATGAGGGGGGAGGAGGCAATAGCCCTCC
CTCCTTCTCCCCACTACGTGTGTGCTCATCCCTTTCTCCCTCCCTCCCCA
TCACGCACGACACAGCATGAGCGACCCCACGCAGCCTTCACAGCTCGGGC
TTGTAGAGGGAGGGAGGGAAAGCAGCCGGGAAGGGGGGGAAGAGGGAGAC
ACGGGCCTCGTGTCGCGGGAGGGGCTGCTGGAGGAGAAAACCGAGGCGAA
GATGAACAGTAGCAGgtacgaggaagggaaagaggtggaggaaagtagga
caggaaggtcgttgtgtgcattgtgctttcgcagtgatatactggtggcg
gtcttcagatgaatgctcagtctacctccccttgctccctccctccctcc
cccaccaccctctcagTGAAAAGGCTCCCTCCCCTCCTCAAGCCGCCCCC
ATGGAAGAAGATGAGGAAGGGCGAGACGAGGAGGAGGAGGAGGAGGAGAG
CGGCGGGAGGGAGGGGATTGGGATGATCTCTGAAAATGGTGTGCAGCAGA
AAAGGGTAATTCGGGAAAAGGTGATGGATAGGGAAGAGGAGTTGGCGGAG
GGAGAGGGAGAGGGGGAAAAGGAGTCAGTGGTGGAGGGAGCGGAGGAGGA
TGAAGAGGCGGAGGAGGAGGGGGAGGGGGGACGAGGCCTCCCTCCTCCCT
CGACGTCCCGAGAGGGCGAAGATGGGGGGCAGGAAGGGAAGGAGGGAGGG
GGGGAGGAGGAGGAAAGCATGTCGGCTGGAgtagcggcgatggagatgca
agggaaagagggggagaaggatgaaggggaggaggaaggggggnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctccct
ccctccctccctccctcccttcctcccctcagGAGGAGCATCCTGTCCGG
CAGGCGGCCGAGGCTCTCTCCGCGCAATTCGAGGCCCGCTTCGAACCCAT
CCACAAGGCGGACATCAAGGAGCGGgtgggtgatgccctccctccctccc
tccctctcttcctccctcctttttctttcgggcgacggacgcatcgtcaa
gcaaattcctcatccttccccctccctctcctcctcttttccttcctctc
ccacagGAGGCGGCCGAAGCAGCAGCGGCAGTAGCAGCAGCACAAGCGGC
CCAGGACGAGAAACTGTCGTCGAAGCAAGTGAGAGAGGCGGCCAGAGAGG
TGGCACGAGAAACAGCCGCAGCGACACAGAGGGCCAGCATGGgtaagcgt
gatagagggagggagggagggagggagggagggagggagggagagagatt
tgagatttttcacacactcctcttttcagaggtctcctccgtcgtccctc
cctccttccctccctccttcccttccttcttccattcctcccctttcatg
tcctccgttgccatgctcactcattttctgctccctctccttccctcctt
ccctctctccttccagGCTCCAACAACAGCACAAATGGCAGTAAGAAGCG
TCGCCGCAGCGAGCATGCAGGAGGGGCCAATAACACAGGAGAGGGAGGAC
GGGAGGGAGGGGGGGGTATGACTTCACCTTTGGTGGAGATTATGAAAGTG
GAAGAGgtgagagcgaatagatggagggagggagggagggagggagggag
agagggcggaaggaagggaggcttacccggcgtttgacgagatgagtggt
agcaacaacaagatgactcatccctccttccttccctccctccctccctc
gccagACGAGCCCTCCTCCTCCTACACTCCTGTCTTCGCCCACCTGGACG
ACGGGGATTTCGGAGGGGGCGGTGTTTTTGGCGGATTTTACAGCGGGCCG
ACCCTCGGTGCAGCCGCCAGCGgtatgaggcccctccctccctccctccc
tccctccccccagccctccctctcttttttcgcccttttcctccaaatgt
cgtctctgtcacatccgcttcttcattctttttttctcccctgcctcccg
acctccttccttccctctctctttccagATGCCGTCTCTGTCACATCCGC
TTCGTCATCCACCAAAAAAGCTCGTCGGGCAGGGGGGGCAGGGGGAGGGA
GGGGGGGAGGGAAAGGAGGAGGAAGTGGAGGAGCCAAACGGAACAGCGGC
ATGGGTGCGAAAGCAGCAGCAGCAGCAGCCGCAGGAGGGGGAGGAGAGGC
GGCTGCCCTCCTTGCTCGCATCGAAGCGTTGGAAAAACAACTTCAGGCAC
AAGGAGGAGGAGGCGGCGGAGTGGGAGGGGGGGTGGCTGCGGGAGGAATG
A
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protein sequence of NO22G02130.1

>NO22G02130.1-protein ID=NO22G02130.1-protein|Name=NO22G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=424bp
MSDPTQPSQLGLVEGGRESSREGGEEGDTGLVSREGLLEEKTEAKMNSSS
EKAPSPPQAAPMEEDEEGRDEEEEEEESGGREGIGMISENGVQQKRVIRE
KVMDREEELAEGEGEGEKESVVEGAEEDEEAEEEGEGGRGLPPPSTSREG
EDGGQEGKEGGGEEEESMSAGEEHPVRQAAEALSAQFEARFEPIHKADIK
EREAAEAAAAVAAAQAAQDEKLSSKQVREAAREVARETAAATQRASMGSN
NSTNGSKKRRRSEHAGGANNTGEGGREGGGGMTSPLVEIMKVEETSPPPP
TLLSSPTWTTGISEGAVFLADFTAGRPSVQPPAMPSLSHPLRHPPKKLVG
QGGQGEGGGEGKEEEVEEPNGTAAWVRKQQQQQPQEGEERRLPSLLASKR
WKNNFRHKEEEAAEWEGGWLREE*
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Synonyms
Publications