NO22G02130.1, NO22G02130.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G02130.1
Unique NameNO22G02130.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2238
Alignment locationchr22:660540..663790 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:660540..663790 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G02130.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G02130NO22G02130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G02130.1NO22G02130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G02130.1.cds1NO22G02130.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G02130.1.cds2NO22G02130.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G02130.1.cds3NO22G02130.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G02130.1.cds4NO22G02130.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G02130.1.cds5NO22G02130.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G02130.1.cds6NO22G02130.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G02130.1.cds7NO22G02130.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G02130.1 ID=NO22G02130.1|Name=NO22G02130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2238bp
ACGAAGCTTTCGCCTTATGTTCTCGCGGGATTTCGGGGATCACTACAATC
TCTCGCGCCCTCTTCTCTGCCTTTGCCTTTGCCTTTGGTTGCTACGATAG
GCACAAGGGCGGGAACGCCTGGCCTGCGGGACTTTCCCGTGCCACTATCT
TGCCTTGTATCCACGTACATTCGCCTCCAGAGTCCTACTTAGTCACTTGT
ACCTCTTTCTTTTGCCCTTCGCAACACAGGCCCGCCCGCTATCTTTCTCC
TTCGCGCGCCGACCACAGACCAACCAAGAAGGCTGGTGATGATTTGGACT
CGAGGCCTCCCGCTTCCCGTCGTCCGCCCGCCCTTGTCCATGCTGCAGGC
CAAGAGTCTGGTGAATCATTGCTTGGGTCATGGAGAAGTGATTCATAAGC
CTGCCAGGCGTGTGGACCTTCGACACCTTTTGTGCCGAGAGCAAGGGAAT
GGCAGGAAGAGCGCCTGCTGATAACTTTTCGGTCTCGCGGAGAGTTGGAA
CCGAGGGTGCATTTGCCCCACATTGTCGTTTGTGCTCATTTTGACCGCTT
TTTCGCCCAGGTCTTCGGTCACATTCTCCACACACACAGCTGAAGAGGGA
AGGAGGATGGGCAGCAGGGTAGGAGCGGCCCTTGGGGTAGAAAAGGGGGG
GGAGAAAAAGAGGGAGGTAAAGGGCTTTGGGCCATGCTGCCTGACTCTTC
CCTTGCTGTTGGCCATGGCCGACCGTTCCTGCCCACCCCCTCCACCCGCA
CAATTGCCGGGCCTTTGTGTCACTTCTCCTGTATGCGGAGAGAGAGGACG
AAGACATGGAGGAGGAGCGATGCTGACTCCGCCTATGTTTTGGCTTACCA
CTGGTTGTTCACCATGAAAAAGATGAGGGGGGAGGAGGCAATAGCCCTCC
CTCCTTCTCCCCACTACGTGTGTGCTCATCCCTTTCTCCCTCCCTCCCCA
TCACGCACGACACAGCATGAGCGACCCCACGCAGCCTTCACAGCTCGGGC
TTGTAGAGGGAGGGAGGGAAAGCAGCCGGGAAGGGGGGGAAGAGGGAGAC
ACGGGCCTCGTGTCGCGGGAGGGGCTGCTGGAGGAGAAAACCGAGGCGAA
GATGAACAGTAGCAGTGAAAAGGCTCCCTCCCCTCCTCAAGCCGCCCCCA
TGGAAGAAGATGAGGAAGGGCGAGACGAGGAGGAGGAGGAGGAGGAGAGC
GGCGGGAGGGAGGGGATTGGGATGATCTCTGAAAATGGTGTGCAGCAGAA
AAGGGTAATTCGGGAAAAGGTGATGGATAGGGAAGAGGAGTTGGCGGAGG
GAGAGGGAGAGGGGGAAAAGGAGTCAGTGGTGGAGGGAGCGGAGGAGGAT
GAAGAGGCGGAGGAGGAGGGGGAGGGGGGACGAGGCCTCCCTCCTCCCTC
GACGTCCCGAGAGGGCGAAGATGGGGGGCAGGAAGGGAAGGAGGGAGGGG
GGGAGGAGGAGGAAAGCATGTCGGCTGGAGAGGAGCATCCTGTCCGGCAG
GCGGCCGAGGCTCTCTCCGCGCAATTCGAGGCCCGCTTCGAACCCATCCA
CAAGGCGGACATCAAGGAGCGGGAGGCGGCCGAAGCAGCAGCGGCAGTAG
CAGCAGCACAAGCGGCCCAGGACGAGAAACTGTCGTCGAAGCAAGTGAGA
GAGGCGGCCAGAGAGGTGGCACGAGAAACAGCCGCAGCGACACAGAGGGC
CAGCATGGGCTCCAACAACAGCACAAATGGCAGTAAGAAGCGTCGCCGCA
GCGAGCATGCAGGAGGGGCCAATAACACAGGAGAGGGAGGACGGGAGGGA
GGGGGGGGTATGACTTCACCTTTGGTGGAGATTATGAAAGTGGAAGAGAC
GAGCCCTCCTCCTCCTACACTCCTGTCTTCGCCCACCTGGACGACGGGGA
TTTCGGAGGGGGCGGTGTTTTTGGCGGATTTTACAGCGGGCCGACCCTCG
GTGCAGCCGCCAGCGATGCCGTCTCTGTCACATCCGCTTCGTCATCCACC
AAAAAAGCTCGTCGGGCAGGGGGGGCAGGGGGAGGGAGGGGGGGAGGGAA
AGGAGGAGGAAGTGGAGGAGCCAAACGGAACAGCGGCATGGGTGCGAAAG
CAGCAGCAGCAGCAGCCGCAGGAGGGGGAGGAGAGGCGGCTGCCCTCCTT
GCTCGCATCGAAGCGTTGGAAAAACAACTTCAGGCACAAGGAGGAGGAGG
CGGCGGAGTGGGAGGGGGGGTGGCTGCGGGAGGAATGA
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protein sequence of NO22G02130.1

>NO22G02130.1-protein ID=NO22G02130.1-protein|Name=NO22G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=424bp
MSDPTQPSQLGLVEGGRESSREGGEEGDTGLVSREGLLEEKTEAKMNSSS
EKAPSPPQAAPMEEDEEGRDEEEEEEESGGREGIGMISENGVQQKRVIRE
KVMDREEELAEGEGEGEKESVVEGAEEDEEAEEEGEGGRGLPPPSTSREG
EDGGQEGKEGGGEEEESMSAGEEHPVRQAAEALSAQFEARFEPIHKADIK
EREAAEAAAAVAAAQAAQDEKLSSKQVREAAREVARETAAATQRASMGSN
NSTNGSKKRRRSEHAGGANNTGEGGREGGGGMTSPLVEIMKVEETSPPPP
TLLSSPTWTTGISEGAVFLADFTAGRPSVQPPAMPSLSHPLRHPPKKLVG
QGGQGEGGGEGKEEEVEEPNGTAAWVRKQQQQQPQEGEERRLPSLLASKR
WKNNFRHKEEEAAEWEGGWLREE*
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mRNA from alignment at chr22:660540..663790-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G02130.1 ID=NO22G02130.1|Name=NO22G02130.1|organism=Nannochloropsis oceanica|type=mRNA|length=3251bp|location=Sequence derived from alignment at chr22:660540..663790- (Nannochloropsis oceanica)
ACGAAGCTTTCGCCTTATGTTCTCGCGGGATTTCGGGGATCACTACAATC
TCTCGCGCCCTCTTCTCTGCCTTTGCCTTTGCCTTTGGTTGCTACGATAG
GCACAAGGGCGGGAACGCCTGGCCTGCGGGACTTTCCCGTGCCACTATCT
TGCCTTGTATCCACGTACATTCGCCTCCAGAGTCCTACTTAGTCACTTGT
ACCTCTTTCTTTTGCCCTTCGCAACACAGGCCCGCCCGCTATCTTTCTCC
TTCGCGCGCCGACCACAGACCAACCAAGAAGGCTGGTGATGATTTGGACT
CGAGGCCTCCCGCTTCCCGTCGTCCGCCCGCCCTTGTCCATGCTGCAGGC
CAAGAGTCTGGTGAATCATTGCTTGGGTCATGGAGAAGTGATTCATAAGC
CTGCCAGGCGTGTGGACCTTCGACACCTTTTGTGCCGAGAGCAAGGGAAT
GGCAGGAAGAGCGCCTGCTGATAACTTTTCGGTCTCGCGGAGAGTTGGAA
CCGAGGGTGCATTTGCCCCACATTGTCGTTTGTGCTCATTTTGACCGCTT
TTTCGCCCAGGTCTTCGGTCACATTCTCCACACACACAGCTGAAGAGGGA
AGGAGGATGGGCAGCAGGGTAGGAGCGGCCCTTGGGGTAGAAAAGGGGGG
GGAGAAAAAGAGGGAGGTAAAGGGCTTTGGGCCATGCTGCCTGACTCTTC
CCTTGCTGTTGGCCATGGCCGACCGTTCCTGCCCACCCCCTCCACCCGCA
CAATTGCCGGGCCTTTGTGTCACTTCTCCTGTATGCGGAGAGAGAGGACG
AAGACATGGAGGAGGAGCGATGCTGACTCCGCCTATGTTTTGGCTTACCA
CTGGTTGTTCACCATGAAAAAGATGAGGGGGGAGGAGGCAATAGCCCTCC
CTCCTTCTCCCCACTACGTGTGTGCTCATCCCTTTCTCCCTCCCTCCCCA
TCACGCACGACACAGCATGAGCGACCCCACGCAGCCTTCACAGCTCGGGC
TTGTAGAGGGAGGGAGGGAAAGCAGCCGGGAAGGGGGGGAAGAGGGAGAC
ACGGGCCTCGTGTCGCGGGAGGGGCTGCTGGAGGAGAAAACCGAGGCGAA
GATGAACAGTAGCAGGTACGAGGAAGGGAAAGAGGTGGAGGAAAGTAGGA
CAGGAAGGTCGTTGTGTGCATTGTGCTTTCGCAGTGATATACTGGTGGCG
GTCTTCAGATGAATGCTCAGTCTACCTCCCCTTGCTCCCTCCCTCCCTCC
CCCACCACCCTCTCAGTGAAAAGGCTCCCTCCCCTCCTCAAGCCGCCCCC
ATGGAAGAAGATGAGGAAGGGCGAGACGAGGAGGAGGAGGAGGAGGAGAG
CGGCGGGAGGGAGGGGATTGGGATGATCTCTGAAAATGGTGTGCAGCAGA
AAAGGGTAATTCGGGAAAAGGTGATGGATAGGGAAGAGGAGTTGGCGGAG
GGAGAGGGAGAGGGGGAAAAGGAGTCAGTGGTGGAGGGAGCGGAGGAGGA
TGAAGAGGCGGAGGAGGAGGGGGAGGGGGGACGAGGCCTCCCTCCTCCCT
CGACGTCCCGAGAGGGCGAAGATGGGGGGCAGGAAGGGAAGGAGGGAGGG
GGGGAGGAGGAGGAAAGCATGTCGGCTGGAGTAGCGGCGATGGAGATGCA
AGGGAAAGAGGGGGAGAAGGATGAAGGGGAGGAGGAAGGGGGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCCT
CCCTCCCTCCCTCCCTCCCTTCCTCCCCTCAGGAGGAGCATCCTGTCCGG
CAGGCGGCCGAGGCTCTCTCCGCGCAATTCGAGGCCCGCTTCGAACCCAT
CCACAAGGCGGACATCAAGGAGCGGGTGGGTGATGCCCTCCCTCCCTCCC
TCCCTCTCTTCCTCCCTCCTTTTTCTTTCGGGCGACGGACGCATCGTCAA
GCAAATTCCTCATCCTTCCCCCTCCCTCTCCTCCTCTTTTCCTTCCTCTC
CCACAGGAGGCGGCCGAAGCAGCAGCGGCAGTAGCAGCAGCACAAGCGGC
CCAGGACGAGAAACTGTCGTCGAAGCAAGTGAGAGAGGCGGCCAGAGAGG
TGGCACGAGAAACAGCCGCAGCGACACAGAGGGCCAGCATGGGTAAGCGT
GATAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGATT
TGAGATTTTTCACACACTCCTCTTTTCAGAGGTCTCCTCCGTCGTCCCTC
CCTCCTTCCCTCCCTCCTTCCCTTCCTTCTTCCATTCCTCCCCTTTCATG
TCCTCCGTTGCCATGCTCACTCATTTTCTGCTCCCTCTCCTTCCCTCCTT
CCCTCTCTCCTTCCAGGCTCCAACAACAGCACAAATGGCAGTAAGAAGCG
TCGCCGCAGCGAGCATGCAGGAGGGGCCAATAACACAGGAGAGGGAGGAC
GGGAGGGAGGGGGGGGTATGACTTCACCTTTGGTGGAGATTATGAAAGTG
GAAGAGGTGAGAGCGAATAGATGGAGGGAGGGAGGGAGGGAGGGAGGGAG
AGAGGGCGGAAGGAAGGGAGGCTTACCCGGCGTTTGACGAGATGAGTGGT
AGCAACAACAAGATGACTCATCCCTCCTTCCTTCCCTCCCTCCCTCCCTC
GCCAGACGAGCCCTCCTCCTCCTACACTCCTGTCTTCGCCCACCTGGACG
ACGGGGATTTCGGAGGGGGCGGTGTTTTTGGCGGATTTTACAGCGGGCCG
ACCCTCGGTGCAGCCGCCAGCGGTATGAGGCCCCTCCCTCCCTCCCTCCC
TCCCTCCCCCCAGCCCTCCCTCTCTTTTTTCGCCCTTTTCCTCCAAATGT
CGTCTCTGTCACATCCGCTTCTTCATTCTTTTTTTCTCCCCTGCCTCCCG
ACCTCCTTCCTTCCCTCTCTCTTTCCAGATGCCGTCTCTGTCACATCCGC
TTCGTCATCCACCAAAAAAGCTCGTCGGGCAGGGGGGGCAGGGGGAGGGA
GGGGGGGAGGGAAAGGAGGAGGAAGTGGAGGAGCCAAACGGAACAGCGGC
ATGGGTGCGAAAGCAGCAGCAGCAGCAGCCGCAGGAGGGGGAGGAGAGGC
GGCTGCCCTCCTTGCTCGCATCGAAGCGTTGGAAAAACAACTTCAGGCAC
AAGGAGGAGGAGGCGGCGGAGTGGGAGGGGGGGTGGCTGCGGGAGGAATG
A
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Coding sequence (CDS) from alignment at chr22:660540..663790-

>NO22G02130.1 ID=NO22G02130.1|Name=NO22G02130.1|organism=Nannochloropsis oceanica|type=CDS|length=1272bp|location=Sequence derived from alignment at chr22:660540..663790- (Nannochloropsis oceanica)
ATGAGCGACCCCACGCAGCCTTCACAGCTCGGGCTTGTAGAGGGAGGGAG
GGAAAGCAGCCGGGAAGGGGGGGAAGAGGGAGACACGGGCCTCGTGTCGC
GGGAGGGGCTGCTGGAGGAGAAAACCGAGGCGAAGATGAACAGTAGCAGT
GAAAAGGCTCCCTCCCCTCCTCAAGCCGCCCCCATGGAAGAAGATGAGGA
AGGGCGAGACGAGGAGGAGGAGGAGGAGGAGAGCGGCGGGAGGGAGGGGA
TTGGGATGATCTCTGAAAATGGTGTGCAGCAGAAAAGGGTAATTCGGGAA
AAGGTGATGGATAGGGAAGAGGAGTTGGCGGAGGGAGAGGGAGAGGGGGA
AAAGGAGTCAGTGGTGGAGGGAGCGGAGGAGGATGAAGAGGCGGAGGAGG
AGGGGGAGGGGGGACGAGGCCTCCCTCCTCCCTCGACGTCCCGAGAGGGC
GAAGATGGGGGGCAGGAAGGGAAGGAGGGAGGGGGGGAGGAGGAGGAAAG
CATGTCGGCTGGAGAGGAGCATCCTGTCCGGCAGGCGGCCGAGGCTCTCT
CCGCGCAATTCGAGGCCCGCTTCGAACCCATCCACAAGGCGGACATCAAG
GAGCGGGAGGCGGCCGAAGCAGCAGCGGCAGTAGCAGCAGCACAAGCGGC
CCAGGACGAGAAACTGTCGTCGAAGCAAGTGAGAGAGGCGGCCAGAGAGG
TGGCACGAGAAACAGCCGCAGCGACACAGAGGGCCAGCATGGGCTCCAAC
AACAGCACAAATGGCAGTAAGAAGCGTCGCCGCAGCGAGCATGCAGGAGG
GGCCAATAACACAGGAGAGGGAGGACGGGAGGGAGGGGGGGGTATGACTT
CACCTTTGGTGGAGATTATGAAAGTGGAAGAGACGAGCCCTCCTCCTCCT
ACACTCCTGTCTTCGCCCACCTGGACGACGGGGATTTCGGAGGGGGCGGT
GTTTTTGGCGGATTTTACAGCGGGCCGACCCTCGGTGCAGCCGCCAGCGA
TGCCGTCTCTGTCACATCCGCTTCGTCATCCACCAAAAAAGCTCGTCGGG
CAGGGGGGGCAGGGGGAGGGAGGGGGGGAGGGAAAGGAGGAGGAAGTGGA
GGAGCCAAACGGAACAGCGGCATGGGTGCGAAAGCAGCAGCAGCAGCAGC
CGCAGGAGGGGGAGGAGAGGCGGCTGCCCTCCTTGCTCGCATCGAAGCGT
TGGAAAAACAACTTCAGGCACAAGGAGGAGGAGGCGGCGGAGTGGGAGGG
GGGGTGGCTGCGGGAGGAATGA
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Synonyms
Publications