NO22G02070, NO22G02070 (gene) Nannochloropsis oceanica

Overview
NameNO22G02070
Unique NameNO22G02070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3895
Alignment locationchr22:641602..645496 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:641602..645496 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G02070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR104ngnoR104Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G02070.2NO22G02070.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO22G02070.1NO22G02070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G02070.2NO22G02070.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO22G02070.1NO22G02070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G02070 ID=NO22G02070|Name=NO22G02070|organism=Nannochloropsis oceanica|type=gene|length=3895bp
GGGAGGTCCCACCGCCTCAATAAAAATTTTGAAGGACAGGGAGGTCCCAC
CGCCTCCTCCCCCCTCCCAGAGCATTGCATGATCTCTTTATATCTTTATT
ATCCCTGTTGGAATGTGTTCTGCCTGGACAAATGTTAGTAGATGGGTTGG
TTGGCATAGGCCCACATTTTTTGTGGTTCGTAGGCATGCATGCAAAGTGG
CCTTCTGCGAGCTCCATTCAAATAAAAGAAAAGATAGATTTCTGCGAGCA
GTAGAGGCTATGATCGCCACCCAACCCCTCAAAAATCAAATCGAGGGGCT
TGTTGATATGTATTCGATGCTTTTTGAGGGGTTTAAGATGGGACCCCTCA
AACAGAGCTACCAAAGTATGAGGGGTTTGCAGACCCGTCAAAAAGTGAGG
GAAGAATCGCTTTTCGAGGGGTTGCGAACACAGCCTCTACTAGAGGCTAC
ATCGCTGCGTGCATACAGTTCTTCATCACGAGCGATTGACGATTTTACTT
GTTTTGTGACCTTCCCATGTTGGTCGTGCCTGCCTCTTTTTAGCCTCGCA
AGTCCACTCTCTGGTCCTCTTTCATTCATCCCGTAATTTCGCGTTCGAAT
GCGCGCGTATCTGCCCGCCCGTACTCAAGGACAGTGGCATCCTGTACCAT
ATTTCGCTGTAACCCACCCAGTTTCCCTGTGTTTGCCAGCACTACCTCCA
GCCAAGCTCGACCGCAATGGTCGCCGTCAACTATCGATCGTGTCACCGTC
AGTGCTATAATGCGGCCGATCTATGTCCCAGAGCTTCTTCTTGCCTAATC
TTGCCGTGCTTTTCATGAAGCTCTCTTGCCTACTCTTGACACCAAAATTG
TGCCGTAACATTATATTCGTGGAGTTTTCAAAAAAGGCATAGAAATTCGA
GGTGTCACAGCATTTTCTATCTCCCCTTCCGTCCTCTCGTCGGGTCCAAA
CCGACCAAACGGCTTCCCGATTCCACCCTTTCCTTCTCGTGAAAGAATGT
TGTACTTGCACATGTCATTGTTCTTTTCCCCTCGACACTCATCGAGAGTG
ATGAAGTGCACGAGAAGGAAGTCTCTCTCATGGCCATATGGTGCGGCGAC
TATTTAGGCCACATGTTGAAGGCAGCACCAGCGTTCGGACGAGCCTCTCG
CACTTTGACCGCCGTTTGGTCCGTGCCTGGGCATCCCGCCTCTCCGATTC
AGTGTTATTAATAATGTACTGACGCGATGCGGGCCTTTTGTCCAACATTG
CCACCATACTCACAACAGGAAAGGGAAGACTAGAGGGCCTTTAAACCGAA
ATCCCCTAACGACATGACGGAACATCAAATTGCCCGAGCTGTTGGGCTGA
AGCCCGTACTGCAGAGGTGCACAAATGCATGCCTTCTTTCGGCGGGGGCG
CCGTCATGGTCGCTCATTGCGCTACACAACTCTAACTTGTTTTCCTTGTT
TAAAAGCATGCTTAGTCCAGTAGATCCGTCAGTTGTAGTCCTTCCCGTGT
TCACCTTTCTTTTCATCTCACCCACCTGACTCCCCTGTCCCCGCATGCAC
AACACCACAGAATACATTTATTACGGATCCCCTCAATCATCACAAAGCGT
GTGTGCGTGATTAAGCGTCAACTTGCGGCGCAAAGCGGTCCAACACTGTG
ACTTACACGTATTGCAGCACCACCAGGGACAAGGGCAGCAGTATTAGTCG
CACCGTTTTGGATGCCCTGAAGgtgggtggtaacgcaaaacagtcatcag
ccgataccttgctgagatagcacacgtgatataggatcctcgctacctct
ttaaagtcgaacgttgacttcctcttcgcccgcctcccttcccgcctccg
ccgccccctcattttccttgttcgtctttccattccgcctcctatctact
ccagccctcatccccaaagctttcctacatttccttcctctcttcctcag
tctaaaagaatgcatgcataaatccccactcattccaacatcatcttatg
caccagCGGCAGCACTAACAAGAACAACAAGAAATAAAGACAAGGAGGAG
GGCGCTGGAGAAGTGAGTCGGGAAACAATCGACCGAAGTCCTCGAAGGAA
GTACAGCAGAGAACAAGAAGAACTGCAACGCAGAAAACACCGGCAGCAAC
GGTAGTACCAGCAAAGGAAAAAAGAGCAACCACTTCAACAGTAACCACAG
TGGCAACGGGCAGAAGACAAAGAAAACAGCAACAGCAACAGCGGGCGTGG
TATCTGAAGCAGGCGAACGAGGAGACGAACGAGGATGCGGAGTCCTATAA
GTTAATTCCATCCGTTTGCGGCATGCTTATGAGTACGACGTCTTTTCCCC
CTTCCCTGCCGATTCCCGCTAGCAGTAGCAACAACAGCAGCAGCAGCAGC
AGCACCATGAGGAGCTCTTGTGAGAAATCCAATCGCATGACGATGgtaag
cctctatgggatggacgaagggatgaaaacagggattgagggagtgaggg
aatgaaaggcgttaccctaaacttaagtatttttgatcccttcctccctc
cctccctccctctccccatttctccctcccttcattccttcctcagACTC
GACTTGACAGTGATGGTAACGATGAATGGCGGTCTCACTGCGCCGTTTGT
GTGTCACGCGAGGTGACACCGTCAGCAGCAGCAGCAGCAGCAGCAGTAGT
AGCAGCAGCAACCACGACGACAGTCTCGGAAGCCACAGTGGCTGGAAAAA
GCGCGGCTGCGACAGCAACAGCAACACCAGCAACAGCAACAGCGACAGCG
GTAGTAGCAGCAGCAGCAACATCAGCAGCAGCAGCATCATCATCAGCAGA
CGACGGGAAAGCAACAGGTACGGCCTTTGTGGGAAAGTCGGGAGGACACG
CTATTAAAATAGGAAGAAGGGAGGAAGGAAGGGAAGGAGGGAGGGGGCGT
CTCGAAGTGGGCTACCTTACTCGCAGAAACGTTTGGGAGACGGCGGGGTC
GGAGGGAGGGAAGGAGGGAAGGAGGGAAGGAGGGATGCAAGTAAGTATTG
AGGAGTCACCTGTTGAGAAGCAAGAGATGGAAGTGGGAGAGGAAGGGGAG
GAGGAGCAGGACGGAGAGGGCGAAGGGGCAGGAGGAACCGGCTCTGCTGA
CAGCAGCATCTGTTATAATCAAGATCTACCAGAACGATTGCAGCCGCAGC
AGCCGCAGCAGGAGGAGGAGGAGGCGGAGGAGAAGGAAGAGAAAATGGAG
GAGGGGGAATACAAGAGGGCCAAGGAGCAGGAGGAGCAAAATCAAGGAGG
ATGGGAGGAGAGGGGGGAAGAAAGACAGAGCGGAAGGGAAAGGCCTAAAA
AGGAGCTGAGTGGGAGCAGGAGCTTGAGTATTTCGACCTCTGCACGGTGT
GGCAGTTACAGCAGCAGCAGCAGCAGGAGCACGACCAGCACCTCTAGAAG
CAGCAGCAGCAGCCACAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCACTT
GCAGCAGTATGGACATTCCGATCCCCGCACAAAATAGTGGGAGCAGTGGA
AGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGCAGTAGTAGTAGCAGCAG
CAGCAGGAGAAGTAACAGCAGCAGCAGCAGCAGCAGCTGCACCAACATTC
TCCCTGCCTTCCTCCCTTCTTTCTTCCCTCTCGTCCCTGCAGCCCCCCAA
GGCACCAGCGACTCGAGCATCAGCAGCACCAACAGCAACAGCAGCCCTCC
CCTACTCCCCAACTACCCTCACCGTCAAGCCCCTCATCCTCCCCCTCCCC
CTCTTCCTCAACCTTCCCCCCTCGTCCTCACACCCCTACCGCGACTGGTC
TCCCCCACACCTTCCCTTCTCTCTCGACCGCGGGCACAAACATGA
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protein sequence of NO22G02070.2

>NO22G02070.2-protein ID=NO22G02070.2-protein|Name=NO22G02070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=474bp
MLMSTTSFPPSLPIPASSSNNSSSSSSTMRSSCEKSNRMTMTRLDSDGND
EWRSHCAVCVSREVTPSAAAAAAAVVAAATTTTVSEATVAGKSAAATATA
TPATATATAVVAAAATSAAAASSSADDGKATGTAFVGKSGGHAIKIGRRE
EGREGGRGRLEVGYLTRRNVWETAGSEGGKEGRREGGMQVSIEESPVEKQ
EMEVGEEGEEEQDGEGEGAGGTGSADSSICYNQDLPERLQPQQPQQEEEE
AEEKEEKMEEGEYKRAKEQEEQNQGGWEERGEERQSGRERPKKELSGSRS
LSISTSARCGSYSSSSSRSTTSTSRSSSSSHSSSSSSSGSSTCSSMDIPI
PAQNSGSSGSSSSSSSSSSSSSSSSSSRRSNSSSSSSSCTNILPAFLPSF
FPLVPAAPQGTSDSSISSTNSNSSPPLLPNYPHRQAPHPPPPPLPQPSPL
VLTPLPRLVSPTPSLLSRPRAQT*
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protein sequence of NO22G02070.1

>NO22G02070.1-protein ID=NO22G02070.1-protein|Name=NO22G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=474bp
MLMSTTSFPPSLPIPASSSNNSSSSSSTMRSSCEKSNRMTMTRLDSDGND
EWRSHCAVCVSREVTPSAAAAAAAVVAAATTTTVSEATVAGKSAAATATA
TPATATATAVVAAAATSAAAASSSADDGKATGTAFVGKSGGHAIKIGRRE
EGREGGRGRLEVGYLTRRNVWETAGSEGGKEGRREGGMQVSIEESPVEKQ
EMEVGEEGEEEQDGEGEGAGGTGSADSSICYNQDLPERLQPQQPQQEEEE
AEEKEEKMEEGEYKRAKEQEEQNQGGWEERGEERQSGRERPKKELSGSRS
LSISTSARCGSYSSSSSRSTTSTSRSSSSSHSSSSSSSGSSTCSSMDIPI
PAQNSGSSGSSSSSSSSSSSSSSSSSSRRSNSSSSSSSCTNILPAFLPSF
FPLVPAAPQGTSDSSISSTNSNSSPPLLPNYPHRQAPHPPPPPLPQPSPL
VLTPLPRLVSPTPSLLSRPRAQT*
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Synonyms
Publications