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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr22 | genome | chr22:641602..645496 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO22G02070.2 ID=NO22G02070.2|Name=NO22G02070.2|organism=Nannochloropsis oceanica|type=mRNA|length=3744bp
GGGAGGTCCCACCGCCTCAATAAAAATTTTGAAGGACAGGGAGGTCCCAC
CGCCTCCTCCCCCCTCCCAGAGCATTGCATGATCTCTTTATATCTTTATT
ATCCCTGTTGGAATGTGTTCTGCCTGGACAAATGTTAGTAGATGGGTTGG
TTGGCATAGGCCCACATTTTTTGTGGTTCGTAGGCATGCATGCAAAGTGG
CCTTCTGCGAGCTCCATTCAAATAAAAGAAAAGATAGATTTCTGCGAGCA
GTAGAGGCTATGATCGCCACCCAACCCCTCAAAAATCAAATCGAGGGGCT
TGTTGATATGTATTCGATGCTTTTTGAGGGGTTTAAGATGGGACCCCTCA
AACAGAGCTACCAAAGTATGAGGGGTTTGCAGACCCGTCAAAAAGTGAGG
GAAGAATCGCTTTTCGAGGGGTTGCGAACACAGCCTCTACTAGAGGCTAC
ATCGCTGCGTGCATACAGTTCTTCATCACGAGCGATTGACGATTTTACTT
GTTTTGTGACCTTCCCATGTTGGTCGTGCCTGCCTCTTTTTAGCCTCGCA
AGTCCACTCTCTGGTCCTCTTTCATTCATCCCGTAATTTCGCGTTCGAAT
GCGCGCGTATCTGCCCGCCCGTACTCAAGGACAGTGGCATCCTGTACCAT
ATTTCGCTGTAACCCACCCAGTTTCCCTGTGTTTGCCAGCACTACCTCCA
GCCAAGCTCGACCGCAATGGTCGCCGTCAACTATCGATCGTGTCACCGTC
AGTGCTATAATGCGGCCGATCTATGTCCCAGAGCTTCTTCTTGCCTAATC
TTGCCGTGCTTTTCATGAAGCTCTCTTGCCTACTCTTGACACCAAAATTG
TGCCGTAACATTATATTCGTGGAGTTTTCAAAAAAGGCATAGAAATTCGA
GGTGTCACAGCATTTTCTATCTCCCCTTCCGTCCTCTCGTCGGGTCCAAA
CCGACCAAACGGCTTCCCGATTCCACCCTTTCCTTCTCGTGAAAGAATGT
TGTACTTGCACATGTCATTGTTCTTTTCCCCTCGACACTCATCGAGAGTG
ATGAAGTGCACGAGAAGGAAGTCTCTCTCATGGCCATATGGTGCGGCGAC
TATTTAGGCCACATGTTGAAGGCAGCACCAGCGTTCGGACGAGCCTCTCG
CACTTTGACCGCCGTTTGGTCCGTGCCTGGGCATCCCGCCTCTCCGATTC
AGTGTTATTAATAATGTACTGACGCGATGCGGGCCTTTTGTCCAACATTG
CCACCATACTCACAACAGGAAAGGGAAGACTAGAGGGCCTTTAAACCGAA
ATCCCCTAACGACATGACGGAACATCAAATTGCCCGAGCTGTTGGGCTGA
AGCCCGTACTGCAGAGGTGCACAAATGCATGCCTTCTTTCGGCGGGGGCG
CCGTCATGGTCGCTCATTGCGCTACACAACTCTAACTTGTTTTCCTTGTT
TAAAAGCATGCTTAGTCCAGTAGATCCGTCAGTTGTAGTCCTTCCCGTGT
TCACCTTTCTTTTCATCTCACCCACCTGACTCCCCTGTCCCCGCATGCAC
AACACCACAGAATACATTTATTACGGATCCCCTCAATCATCACAAAGCGT
GTGTGCGTGATTAAGCGTCAACTTGCGGCGCAAAGCGGTCCAACACTGTG
ACTTACACGTATTGCAGCACCACCAGGGACAAGGGCAGCAGTATTAGTCG
CACCGTTTTGGATGCCCTGAAGGTGGGTGGTAACGCAAAACAGTCATCAG
CCGATACCTTGCTGAGATAGCACACGTGATATAGGATCCTCGCTACCTCT
TTAAAGTCGAACGTTGACTTCCTCTTCGCCCGCCTCCCTTCCCGCCTCCG
CCGCCCCCTCATTTTCCTTGTTCGTCTTTCCATTCCGCCTCCTATCTACT
CCAGCCCTCATCCCCAAAGCTTTCCTACATTTCCTTCCTCTCTTCCTCAG
TCTAAAAGAATGCATGCATAAATCCCCACTCATTCCAACATCATCTTATG
CACCAGCGGCAGCACTAACAAGAACAACAAGAAATAAAGACAAGGAGGAG
GGCGCTGGAGAAGTGAGTCGGGAAACAATCGACCGAAGTCCTCGAAGGAA
GTACAGCAGAGAACAAGAAGAACTGCAACGCAGAAAACACCGGCAGCAAC
GGTAGTACCAGCAAAGGAAAAAAGAGCAACCACTTCAACAGTAACCACAG
TGGCAACGGGCAGAAGACAAAGAAAACAGCAACAGCAACAGCGGGCGTGG
TATCTGAAGCAGGCGAACGAGGAGACGAACGAGGATGCGGAGTCCTATAA
GTTAATTCCATCCGTTTGCGGCATGCTTATGAGTACGACGTCTTTTCCCC
CTTCCCTGCCGATTCCCGCTAGCAGTAGCAACAACAGCAGCAGCAGCAGC
AGCACCATGAGGAGCTCTTGTGAGAAATCCAATCGCATGACGATGACTCG
ACTTGACAGTGATGGTAACGATGAATGGCGGTCTCACTGCGCCGTTTGTG
TGTCACGCGAGGTGACACCGTCAGCAGCAGCAGCAGCAGCAGCAGTAGTA
GCAGCAGCAACCACGACGACAGTCTCGGAAGCCACAGTGGCTGGAAAAAG
CGCGGCTGCGACAGCAACAGCAACACCAGCAACAGCAACAGCGACAGCGG
TAGTAGCAGCAGCAGCAACATCAGCAGCAGCAGCATCATCATCAGCAGAC
GACGGGAAAGCAACAGGTACGGCCTTTGTGGGAAAGTCGGGAGGACACGC
TATTAAAATAGGAAGAAGGGAGGAAGGAAGGGAAGGAGGGAGGGGGCGTC
TCGAAGTGGGCTACCTTACTCGCAGAAACGTTTGGGAGACGGCGGGGTCG
GAGGGAGGGAAGGAGGGAAGGAGGGAAGGAGGGATGCAAGTAAGTATTGA
GGAGTCACCTGTTGAGAAGCAAGAGATGGAAGTGGGAGAGGAAGGGGAGG
AGGAGCAGGACGGAGAGGGCGAAGGGGCAGGAGGAACCGGCTCTGCTGAC
AGCAGCATCTGTTATAATCAAGATCTACCAGAACGATTGCAGCCGCAGCA
GCCGCAGCAGGAGGAGGAGGAGGCGGAGGAGAAGGAAGAGAAAATGGAGG
AGGGGGAATACAAGAGGGCCAAGGAGCAGGAGGAGCAAAATCAAGGAGGA
TGGGAGGAGAGGGGGGAAGAAAGACAGAGCGGAAGGGAAAGGCCTAAAAA
GGAGCTGAGTGGGAGCAGGAGCTTGAGTATTTCGACCTCTGCACGGTGTG
GCAGTTACAGCAGCAGCAGCAGCAGGAGCACGACCAGCACCTCTAGAAGC
AGCAGCAGCAGCCACAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCACTTG
CAGCAGTATGGACATTCCGATCCCCGCACAAAATAGTGGGAGCAGTGGAA
GCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGCAGTAGTAGTAGCAGCAGC
AGCAGGAGAAGTAACAGCAGCAGCAGCAGCAGCAGCTGCACCAACATTCT
CCCTGCCTTCCTCCCTTCTTTCTTCCCTCTCGTCCCTGCAGCCCCCCAAG
GCACCAGCGACTCGAGCATCAGCAGCACCAACAGCAACAGCAGCCCTCCC
CTACTCCCCAACTACCCTCACCGTCAAGCCCCTCATCCTCCCCCTCCCCC
TCTTCCTCAACCTTCCCCCCTCGTCCTCACACCCCTACCGCGACTGGTCT
CCCCCACACCTTCCCTTCTCTCTCGACCGCGGGCACAAACATGA back to topprotein sequence of NO22G02070.2 >NO22G02070.2-protein ID=NO22G02070.2-protein|Name=NO22G02070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=474bp
MLMSTTSFPPSLPIPASSSNNSSSSSSTMRSSCEKSNRMTMTRLDSDGND
EWRSHCAVCVSREVTPSAAAAAAAVVAAATTTTVSEATVAGKSAAATATA
TPATATATAVVAAAATSAAAASSSADDGKATGTAFVGKSGGHAIKIGRRE
EGREGGRGRLEVGYLTRRNVWETAGSEGGKEGRREGGMQVSIEESPVEKQ
EMEVGEEGEEEQDGEGEGAGGTGSADSSICYNQDLPERLQPQQPQQEEEE
AEEKEEKMEEGEYKRAKEQEEQNQGGWEERGEERQSGRERPKKELSGSRS
LSISTSARCGSYSSSSSRSTTSTSRSSSSSHSSSSSSSGSSTCSSMDIPI
PAQNSGSSGSSSSSSSSSSSSSSSSSSRRSNSSSSSSSCTNILPAFLPSF
FPLVPAAPQGTSDSSISSTNSNSSPPLLPNYPHRQAPHPPPPPLPQPSPL
VLTPLPRLVSPTPSLLSRPRAQT* back to topmRNA from alignment at chr22:641602..645496- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO22G02070.2 ID=NO22G02070.2|Name=NO22G02070.2|organism=Nannochloropsis oceanica|type=mRNA|length=3895bp|location=Sequence derived from alignment at chr22:641602..645496- (Nannochloropsis oceanica)
GGGAGGTCCCACCGCCTCAATAAAAATTTTGAAGGACAGGGAGGTCCCAC
CGCCTCCTCCCCCCTCCCAGAGCATTGCATGATCTCTTTATATCTTTATT
ATCCCTGTTGGAATGTGTTCTGCCTGGACAAATGTTAGTAGATGGGTTGG
TTGGCATAGGCCCACATTTTTTGTGGTTCGTAGGCATGCATGCAAAGTGG
CCTTCTGCGAGCTCCATTCAAATAAAAGAAAAGATAGATTTCTGCGAGCA
GTAGAGGCTATGATCGCCACCCAACCCCTCAAAAATCAAATCGAGGGGCT
TGTTGATATGTATTCGATGCTTTTTGAGGGGTTTAAGATGGGACCCCTCA
AACAGAGCTACCAAAGTATGAGGGGTTTGCAGACCCGTCAAAAAGTGAGG
GAAGAATCGCTTTTCGAGGGGTTGCGAACACAGCCTCTACTAGAGGCTAC
ATCGCTGCGTGCATACAGTTCTTCATCACGAGCGATTGACGATTTTACTT
GTTTTGTGACCTTCCCATGTTGGTCGTGCCTGCCTCTTTTTAGCCTCGCA
AGTCCACTCTCTGGTCCTCTTTCATTCATCCCGTAATTTCGCGTTCGAAT
GCGCGCGTATCTGCCCGCCCGTACTCAAGGACAGTGGCATCCTGTACCAT
ATTTCGCTGTAACCCACCCAGTTTCCCTGTGTTTGCCAGCACTACCTCCA
GCCAAGCTCGACCGCAATGGTCGCCGTCAACTATCGATCGTGTCACCGTC
AGTGCTATAATGCGGCCGATCTATGTCCCAGAGCTTCTTCTTGCCTAATC
TTGCCGTGCTTTTCATGAAGCTCTCTTGCCTACTCTTGACACCAAAATTG
TGCCGTAACATTATATTCGTGGAGTTTTCAAAAAAGGCATAGAAATTCGA
GGTGTCACAGCATTTTCTATCTCCCCTTCCGTCCTCTCGTCGGGTCCAAA
CCGACCAAACGGCTTCCCGATTCCACCCTTTCCTTCTCGTGAAAGAATGT
TGTACTTGCACATGTCATTGTTCTTTTCCCCTCGACACTCATCGAGAGTG
ATGAAGTGCACGAGAAGGAAGTCTCTCTCATGGCCATATGGTGCGGCGAC
TATTTAGGCCACATGTTGAAGGCAGCACCAGCGTTCGGACGAGCCTCTCG
CACTTTGACCGCCGTTTGGTCCGTGCCTGGGCATCCCGCCTCTCCGATTC
AGTGTTATTAATAATGTACTGACGCGATGCGGGCCTTTTGTCCAACATTG
CCACCATACTCACAACAGGAAAGGGAAGACTAGAGGGCCTTTAAACCGAA
ATCCCCTAACGACATGACGGAACATCAAATTGCCCGAGCTGTTGGGCTGA
AGCCCGTACTGCAGAGGTGCACAAATGCATGCCTTCTTTCGGCGGGGGCG
CCGTCATGGTCGCTCATTGCGCTACACAACTCTAACTTGTTTTCCTTGTT
TAAAAGCATGCTTAGTCCAGTAGATCCGTCAGTTGTAGTCCTTCCCGTGT
TCACCTTTCTTTTCATCTCACCCACCTGACTCCCCTGTCCCCGCATGCAC
AACACCACAGAATACATTTATTACGGATCCCCTCAATCATCACAAAGCGT
GTGTGCGTGATTAAGCGTCAACTTGCGGCGCAAAGCGGTCCAACACTGTG
ACTTACACGTATTGCAGCACCACCAGGGACAAGGGCAGCAGTATTAGTCG
CACCGTTTTGGATGCCCTGAAGGTGGGTGGTAACGCAAAACAGTCATCAG
CCGATACCTTGCTGAGATAGCACACGTGATATAGGATCCTCGCTACCTCT
TTAAAGTCGAACGTTGACTTCCTCTTCGCCCGCCTCCCTTCCCGCCTCCG
CCGCCCCCTCATTTTCCTTGTTCGTCTTTCCATTCCGCCTCCTATCTACT
CCAGCCCTCATCCCCAAAGCTTTCCTACATTTCCTTCCTCTCTTCCTCAG
TCTAAAAGAATGCATGCATAAATCCCCACTCATTCCAACATCATCTTATG
CACCAGCGGCAGCACTAACAAGAACAACAAGAAATAAAGACAAGGAGGAG
GGCGCTGGAGAAGTGAGTCGGGAAACAATCGACCGAAGTCCTCGAAGGAA
GTACAGCAGAGAACAAGAAGAACTGCAACGCAGAAAACACCGGCAGCAAC
GGTAGTACCAGCAAAGGAAAAAAGAGCAACCACTTCAACAGTAACCACAG
TGGCAACGGGCAGAAGACAAAGAAAACAGCAACAGCAACAGCGGGCGTGG
TATCTGAAGCAGGCGAACGAGGAGACGAACGAGGATGCGGAGTCCTATAA
GTTAATTCCATCCGTTTGCGGCATGCTTATGAGTACGACGTCTTTTCCCC
CTTCCCTGCCGATTCCCGCTAGCAGTAGCAACAACAGCAGCAGCAGCAGC
AGCACCATGAGGAGCTCTTGTGAGAAATCCAATCGCATGACGATGGTAAG
CCTCTATGGGATGGACGAAGGGATGAAAACAGGGATTGAGGGAGTGAGGG
AATGAAAGGCGTTACCCTAAACTTAAGTATTTTTGATCCCTTCCTCCCTC
CCTCCCTCCCTCTCCCCATTTCTCCCTCCCTTCATTCCTTCCTCAGACTC
GACTTGACAGTGATGGTAACGATGAATGGCGGTCTCACTGCGCCGTTTGT
GTGTCACGCGAGGTGACACCGTCAGCAGCAGCAGCAGCAGCAGCAGTAGT
AGCAGCAGCAACCACGACGACAGTCTCGGAAGCCACAGTGGCTGGAAAAA
GCGCGGCTGCGACAGCAACAGCAACACCAGCAACAGCAACAGCGACAGCG
GTAGTAGCAGCAGCAGCAACATCAGCAGCAGCAGCATCATCATCAGCAGA
CGACGGGAAAGCAACAGGTACGGCCTTTGTGGGAAAGTCGGGAGGACACG
CTATTAAAATAGGAAGAAGGGAGGAAGGAAGGGAAGGAGGGAGGGGGCGT
CTCGAAGTGGGCTACCTTACTCGCAGAAACGTTTGGGAGACGGCGGGGTC
GGAGGGAGGGAAGGAGGGAAGGAGGGAAGGAGGGATGCAAGTAAGTATTG
AGGAGTCACCTGTTGAGAAGCAAGAGATGGAAGTGGGAGAGGAAGGGGAG
GAGGAGCAGGACGGAGAGGGCGAAGGGGCAGGAGGAACCGGCTCTGCTGA
CAGCAGCATCTGTTATAATCAAGATCTACCAGAACGATTGCAGCCGCAGC
AGCCGCAGCAGGAGGAGGAGGAGGCGGAGGAGAAGGAAGAGAAAATGGAG
GAGGGGGAATACAAGAGGGCCAAGGAGCAGGAGGAGCAAAATCAAGGAGG
ATGGGAGGAGAGGGGGGAAGAAAGACAGAGCGGAAGGGAAAGGCCTAAAA
AGGAGCTGAGTGGGAGCAGGAGCTTGAGTATTTCGACCTCTGCACGGTGT
GGCAGTTACAGCAGCAGCAGCAGCAGGAGCACGACCAGCACCTCTAGAAG
CAGCAGCAGCAGCCACAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCACTT
GCAGCAGTATGGACATTCCGATCCCCGCACAAAATAGTGGGAGCAGTGGA
AGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGCAGTAGTAGTAGCAGCAG
CAGCAGGAGAAGTAACAGCAGCAGCAGCAGCAGCAGCTGCACCAACATTC
TCCCTGCCTTCCTCCCTTCTTTCTTCCCTCTCGTCCCTGCAGCCCCCCAA
GGCACCAGCGACTCGAGCATCAGCAGCACCAACAGCAACAGCAGCCCTCC
CCTACTCCCCAACTACCCTCACCGTCAAGCCCCTCATCCTCCCCCTCCCC
CTCTTCCTCAACCTTCCCCCCTCGTCCTCACACCCCTACCGCGACTGGTC
TCCCCCACACCTTCCCTTCTCTCTCGACCGCGGGCACAAACATGA back to topCoding sequence (CDS) from alignment at chr22:641602..645496- >NO22G02070.2 ID=NO22G02070.2|Name=NO22G02070.2|organism=Nannochloropsis oceanica|type=CDS|length=1422bp|location=Sequence derived from alignment at chr22:641602..645496- (Nannochloropsis oceanica)
ATGCTTATGAGTACGACGTCTTTTCCCCCTTCCCTGCCGATTCCCGCTAG
CAGTAGCAACAACAGCAGCAGCAGCAGCAGCACCATGAGGAGCTCTTGTG
AGAAATCCAATCGCATGACGATGACTCGACTTGACAGTGATGGTAACGAT
GAATGGCGGTCTCACTGCGCCGTTTGTGTGTCACGCGAGGTGACACCGTC
AGCAGCAGCAGCAGCAGCAGCAGTAGTAGCAGCAGCAACCACGACGACAG
TCTCGGAAGCCACAGTGGCTGGAAAAAGCGCGGCTGCGACAGCAACAGCA
ACACCAGCAACAGCAACAGCGACAGCGGTAGTAGCAGCAGCAGCAACATC
AGCAGCAGCAGCATCATCATCAGCAGACGACGGGAAAGCAACAGGTACGG
CCTTTGTGGGAAAGTCGGGAGGACACGCTATTAAAATAGGAAGAAGGGAG
GAAGGAAGGGAAGGAGGGAGGGGGCGTCTCGAAGTGGGCTACCTTACTCG
CAGAAACGTTTGGGAGACGGCGGGGTCGGAGGGAGGGAAGGAGGGAAGGA
GGGAAGGAGGGATGCAAGTAAGTATTGAGGAGTCACCTGTTGAGAAGCAA
GAGATGGAAGTGGGAGAGGAAGGGGAGGAGGAGCAGGACGGAGAGGGCGA
AGGGGCAGGAGGAACCGGCTCTGCTGACAGCAGCATCTGTTATAATCAAG
ATCTACCAGAACGATTGCAGCCGCAGCAGCCGCAGCAGGAGGAGGAGGAG
GCGGAGGAGAAGGAAGAGAAAATGGAGGAGGGGGAATACAAGAGGGCCAA
GGAGCAGGAGGAGCAAAATCAAGGAGGATGGGAGGAGAGGGGGGAAGAAA
GACAGAGCGGAAGGGAAAGGCCTAAAAAGGAGCTGAGTGGGAGCAGGAGC
TTGAGTATTTCGACCTCTGCACGGTGTGGCAGTTACAGCAGCAGCAGCAG
CAGGAGCACGACCAGCACCTCTAGAAGCAGCAGCAGCAGCCACAGCAGCA
GCAGCAGCAGCAGCGGCAGCAGCACTTGCAGCAGTATGGACATTCCGATC
CCCGCACAAAATAGTGGGAGCAGTGGAAGCAGCAGCAGCAGTAGTAGCAG
CAGCAGCAGCAGTAGTAGTAGCAGCAGCAGCAGGAGAAGTAACAGCAGCA
GCAGCAGCAGCAGCTGCACCAACATTCTCCCTGCCTTCCTCCCTTCTTTC
TTCCCTCTCGTCCCTGCAGCCCCCCAAGGCACCAGCGACTCGAGCATCAG
CAGCACCAACAGCAACAGCAGCCCTCCCCTACTCCCCAACTACCCTCACC
GTCAAGCCCCTCATCCTCCCCCTCCCCCTCTTCCTCAACCTTCCCCCCTC
GTCCTCACACCCCTACCGCGACTGGTCTCCCCCACACCTTCCCTTCTCTC
TCGACCGCGGGCACAAACATGA back to top
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