NO22G01800, NO22G01800 (gene) Nannochloropsis oceanica

Overview
NameNO22G01800
Unique NameNO22G01800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2400
Alignment locationchr22:528175..530574 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:528175..530574 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01800.1NO22G01800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|106187gene_7191Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01800.1NO22G01800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01800 ID=NO22G01800|Name=NO22G01800|organism=Nannochloropsis oceanica|type=gene|length=2400bp
ATGGACCAAGAAGAAAAAAATCTTGCACGGGCCAGCACTTTGATGAGCTC
TGCCCCTCACTTTCTTACGAGGGAGGAGGAGAAAGCGATGGCGCAAGAGC
AGCAGCAGGAAAAGCCGGAAGAGGAGCAGGAGCATTGGGATGGGGAGGGG
GATTCCCAGGGAGCCTTTCCGTCGCTATCCGCCACATCATCGTCTTCCTT
CACCTATTCCTCGTCTTTGCAGCATGTGTGGTCATCAGCTGGAGTGAGGA
TCGCAGGGCTCTCGCCAGTGTACGACAAAAAAGAGGAGGTTGCGGTAACA
CCTCCTTCCTCCTCTTCCTCCTCCTCCCCCTCCACTCTCACCGACACCTC
GATTTCTGCGATTTCTGCCGCTCTGGAGCAGGAAGACGAGAGCATCACAT
GGACAGCAGCAACAGAAACAACCACAGAAGCGACTCCCCTGGTCGATGGA
AGTGTCGTGCGTCTCCTCCTTGATCCTCCTGATGAGAAGGACGTTGTCGA
TGCGAGGGATGTGGACGGAGCCAGCATAGAGTCAGTGAGAGGAGATGAAG
AAAGCGAGGATCTAGAGAGAGAAATAGCGTACATGGAGCAGAGCCAGAAA
AGTCAGGAGGAGGAAGGGGAGGATGAAGGGAGACAGAGAAGGGCGGCACG
GGTCGTCGGCTGGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGGAGG
ATGAGGAGGAGGAGGAGAGGGAGAGGGAGGAAGGGAGGGATGCTGGAGGT
GGGCTGCCAGTTGTGATGACATCGATGGAGGTAAAAAGAGAAGAAGAGAG
GGAAGAGAAGGATGACGAAGTGGCAGCAGCAGCAACAGCAGCAGCAGCAG
CACCACCACCACCACCACCATCATTATCATCATCAGTAGCGACGACGACG
ACCAAAGTGGCCAAGACCTTTGAGGAAGAGGAGGACAAACAGAAGGAAGA
GAAGGAGAAGGAATGCAAGGAAGAAGGGAAGGAAGAAGGGAAGGGGGAAA
GGGAGGAGGCCATGGCCATAGCAGTGCAAGGAAAAGAAGGAGAAAACGAC
GTTAGCCGCGCGCTGTTCAGGGATGAAGAGGAAGTGGAAGAGGTGGAAGA
AAAGGAGGGAGAAGGCGATCCCGCCGTAATCCAGCAGCAGGCCCGTCATG
AAGCTTACATTCTCCTCGTCCTCACCCTCTACCTCCCCTTCTTCTTACTG
GTCAAGGCCTCTAGATGGACTCCAATCTTCCTTAAGATGGTTGCGTTGGG
CACCCTGGCGTTGCTGTTTCGCCTCGTGCATGCGATTAATCGTTCGGGTA
TAGGTGGGGAAAAAGGGGAGGGAGGGAGGGAGGGAGGGATGGTGCTGAGG
AGGGGGGAAGGAGGGAGAGAAGGGCGGCAGGAGGAGCAGGAGGAGACGCA
GCAGGGTTTTCCTTTCTTTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTG
GTGCTGCTGCTGGTGCTGCTGCTGCCACTAGTGCCCCCGAAGGAGGGACA
GTCTCTCCCGTGAAGTCCTCCTCTTTTTCATCTGCTGTCGTCACTCCTTC
TCCTGTCAACAGCAAAAGCAGCAGTCGCAGTCGCAGCAGCAGCGGCAGCC
ACAGCAGTAGCAGCCGCAGCAGCAGCAGCAGAGATCGAAATGCCTCGCTC
TCTCCGTTTTCCTCCCCTAATTTCTCCTTCTCCATCTATTCCTCCTCCGC
CGCTTCGACTCAGCCACAGAATGAGCCTTGCTCCTCCAAGGGAGGGAAGG
AAAGGAGGGAGGGAGGGAGGAAGGAAGGGAAGGATTGGGTGGAGCAGGTG
ACCTCTGTGTGGACCCTCTCTCCTATTTCTGAGGGAGGATCTCCGGAGGC
GAGGAAAAGAGGGGGGAAGGATGAAATGGAGGAGGAGGGGGAAGAGGGGG
AGGGAGTAGAAGAGGAGGGGAGGGACGAGGTGGAGGAGGAGGGAGAGGAG
GGGTGGGGGCAGGGATGGAGGGAAAGTGGGAAGGGGAGGGAGGGAGGGAA
GGAGAAGAAGGGAAGATTTTTGCAGTTGGCCTCGCTGCTGAAGGAGAAAA
ACAATGAGCACCACCACTATCAGCAGCAGCAGCAGCAGACGCGCCATGAG
CAGCAGCAGCAGACGCAGCAGAGGAAAAAGGGACTGGTGGTCGTATTTGA
CAAGATCAAGAAAAGCGCCGCCTCCTCCTCCTCCTCCTCCCCCTCCTTCC
CCCCCTGGTCCTCTTCCACCTCCTCTGTACCCTCCTCACTTTCCTCCATT
CCACCCTCCTCTCTTGCACGAGCAGCAGCTGTGTGCACGTCTCTTTCCTC
CCCTGCTGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGACGAGCAGCAGCC
GCAATATGGGCGGAGGCTTGGGAGCGCGCTTGTTAAGGAAGAAGGGCTAG
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protein sequence of NO22G01800.1

>NO22G01800.1-protein ID=NO22G01800.1-protein|Name=NO22G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=800bp
MDQEEKNLARASTLMSSAPHFLTREEEKAMAQEQQQEKPEEEQEHWDGEG
DSQGAFPSLSATSSSSFTYSSSLQHVWSSAGVRIAGLSPVYDKKEEVAVT
PPSSSSSSSPSTLTDTSISAISAALEQEDESITWTAATETTTEATPLVDG
SVVRLLLDPPDEKDVVDARDVDGASIESVRGDEESEDLEREIAYMEQSQK
SQEEEGEDEGRQRRAARVVGWEEEEEEEEEQEEDEEEEEREREEGRDAGG
GLPVVMTSMEVKREEEREEKDDEVAAAATAAAAAPPPPPPSLSSSVATTT
TKVAKTFEEEEDKQKEEKEKECKEEGKEEGKGEREEAMAIAVQGKEGEND
VSRALFRDEEEVEEVEEKEGEGDPAVIQQQARHEAYILLVLTLYLPFFLL
VKASRWTPIFLKMVALGTLALLFRLVHAINRSGIGGEKGEGGREGGMVLR
RGEGGREGRQEEQEETQQGFPFFGAGAGAGAGAGAAAGAAAATSAPEGGT
VSPVKSSSFSSAVVTPSPVNSKSSSRSRSSSGSHSSSSRSSSSRDRNASL
SPFSSPNFSFSIYSSSAASTQPQNEPCSSKGGKERREGGRKEGKDWVEQV
TSVWTLSPISEGGSPEARKRGGKDEMEEEGEEGEGVEEEGRDEVEEEGEE
GWGQGWRESGKGREGGKEKKGRFLQLASLLKEKNNEHHHYQQQQQQTRHE
QQQQTQQRKKGLVVVFDKIKKSAASSSSSSPSFPPWSSSTSSVPSSLSSI
PPSSLARAAAVCTSLSSPAGREGGREGGKTSSSRNMGGGLGARLLRKKG*
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Synonyms
Publications