NO22G01680, NO22G01680 (gene) Nannochloropsis oceanica

Overview
NameNO22G01680
Unique NameNO22G01680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length561
Alignment locationchr22:488881..489441 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:488881..489441 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR000182GNAT_dom
Homology
BLAST of NO22G01680 vs. NCBI_GenBank
Match: EWM21526.1 (hypothetical protein Naga_100204g9 [Nannochloropsis gaditana])

HSP 1 Score: 195.3 bits (495), Expect = 1.700e-46
Identity = 105/179 (58.66%), Postives = 125/179 (69.83%), Query Frame = 0
Query:   14 LSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNF---------CNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARLSRGLGTKLVVMEL 184
            L FR GLPTD PLIRQSM +ARMNP FL P+ F +AE    G    TG AT  GFGQ+RP+ G    V ELASVYVLPA+R+Q +GS+I+++LV+NF           +  +     RLVLLTLADTA FY  H F V+PDPV+A+PPLP + VLE+LAGSVVARLSRG  TKLV MEL
Sbjct:   33 LHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEH--PGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMEL 209          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: XP_005854123.1 (hypothetical protein NGA_2041000 [Nannochloropsis gaditana CCMP526] >EKU22234.1 hypothetical protein NGA_2041000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 195.3 bits (495), Expect = 1.700e-46
Identity = 105/179 (58.66%), Postives = 125/179 (69.83%), Query Frame = 0
Query:   14 LSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNF---------CNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARLSRGLGTKLVVMEL 184
            L FR GLPTD PLIRQSM +ARMNP FL P+ F +AE    G    TG AT  GFGQ+RP+ G    V ELASVYVLPA+R+Q +GS+I+++LV+NF           +  +     RLVLLTLADTA FY  H F V+PDPV+A+PPLP + VLE+LAGSVVARLSRG  TKLV MEL
Sbjct:   33 LHFRPGLPTDNPLIRQSMLEARMNPAFLKPEYFTIAEH--PGPNAGTGRATTAGFGQIRPILGTGGQVCELASVYVLPASRKQRIGSRIIARLVENFRADNSRARQVPSSSQSVPTPRLVLLTLADTAPFYSSHGFFVLPDPVRAKPPLPMLFVLEYLAGSVVARLSRGPATKLVCMEL 209          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: CBN74296.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 85.9 bits (211), Expect = 1.500e-13
Identity = 62/180 (34.44%), Postives = 91/180 (50.56%), Query Frame = 0
Query:    3 HARCSASCPLELSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARLSRGLGTKLVVME 183
            +A    + P EL FR    T+   I++ +    MNP  ++  NFI AEQ             +VGFGQVRP+ G++   +ELAS++V  + R +G+GS +V +LV+ + +T  EG   R L LLTL  T  FY  + F V P        +P +L  E   GS+   L    G  +V M+
Sbjct:   39 YASQEPTTPGELHFRPAAKTEQGTIQKILVGMLMNPMSIDISNFICAEQ----------EGALVGFGQVRPIGGSS---YELASLHVDESYRGRGIGSSVVRQLVKGYVSTHGEG-QIRNLFLLTLESTVPFYEKNGFAVAP-----ANEIPTVLKAERAVGSL---LQSFFGNSVVCMQ 196          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: PSC69945.1 (GNAT family N-acetyltransferase [Micractinium conductrix])

HSP 1 Score: 79.0 bits (193), Expect = 1.800e-11
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 0
Query:    9 SCPLELSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARL 171
            S P  +  R G P+DA  +R ++   R+NP  L+P+ F VAE     +++ +G   ++GFGQ++PV+G      ELAS+ V    R +G+G+ +V  LV       + G +P  L L+T+   A+ Y    F  VP     Q  +P  ++ E LAG VVA L
Sbjct:    8 SLPQGVRLRPGSPSDAAFLRSAVLRERLNPLGLHPERFTVAE-----RQRPSGVVEIIGFGQIKPVSGG--AALELASLVVEKGERGRGLGAALVRDLV------GRAGGTP--LFLMTIQSRAALYNRCGFEEVPASSLLQ--VPAFMLAEALAGVVVAYL 152          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: XP_002178633.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50298.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 77.4 bits (189), Expect = 5.200e-11
Identity = 61/181 (33.70%), Postives = 90/181 (49.72%), Query Frame = 0
Query:    1 MIHARCSASCPLELSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARLSRGLGTKLVVM 182
            MI   C A     + +R     D  + R+ +    MNP  +   + +VA       +   G  T++GFGQ+RPV   +E   ELAS++V P  R QG+G+ +V +L+Q     D+       + LLTL  T+ FY  H F  + +  + +  LPP L  EF AGS+   LS  LG +LV M
Sbjct:   17 MIIVPCFA---FSVRYRSANANDVLVARKILFQEAMNPLSVTQNHLVVAFD-----QDRDGEDTLLGFGQIRPV---DERFAELASLFVHPDWRGQGIGTALVFELLQRH---DQCSNPDTDVCLLTLRSTSQFYKLHGFMTIEES-EVKINLPPALRFEFAAGSL---LSTFLGNELVCM 179          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: PRW44440.1 (GCN5 family acetyltransferase [Chlorella sorokiniana])

HSP 1 Score: 74.7 bits (182), Expect = 3.400e-10
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 0
Query:   14 LSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARL 171
            L  R G P+D   + + +   ++NPT L+P  F VAE     +    GS+ +VG GQ++P++G      ELAS+ V P  R  GVGSQ++  LVQ      + G++P  + L T++   + Y    F  VP     +  +P  L LE+  G V+ARL
Sbjct:   16 LRLRPGQPSDRGTLWRMVLGEKLNPTGLDPARFTVAE-----RTAADGSSRIVGVGQLKPLSGG--AALELASLVVAPEERGNGVGSQLIRSLVQ------RAGSTP--IYLTTISQRMALYQRCGFQEVP-----RSEVPLYLQLEYFLGIVLARL 152          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: XP_005760880.1 (hypothetical protein EMIHUDRAFT_249102 [Emiliania huxleyi CCMP1516] >EOD08451.1 hypothetical protein EMIHUDRAFT_249102 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 73.6 bits (179), Expect = 7.500e-10
Identity = 56/161 (34.78%), Postives = 79/161 (49.07%), Query Frame = 0
Query:   14 LSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNTDKEGA-SPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARLSRG 174
            L+ R   P++AP++   +   RMNP  ++P+ F+VA     G         +  FGQ+RP+        ELAS+ V P  R  GVG+ + +KL+       + GA S + L L+TL  T  FY    F  V  P       P  + LE  AGSVVARL+ G
Sbjct:   26 LAVRPAAPSEAPVLLSRLVRERMNPLSVDPERFLVAWDEPNG---------IAAFGQIRPL---GSDASELASLVVEPRYRGLGVGTMLAAKLLAR----HRSGADSSKPLYLVTLQRTQPFYERLGFAPVSSP-------PTEMRLEVAAGSVVARLAAG 163          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: XP_005792994.1 (hypothetical protein EMIHUDRAFT_222679 [Emiliania huxleyi CCMP1516] >EOD40565.1 hypothetical protein EMIHUDRAFT_222679 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 73.6 bits (179), Expect = 7.500e-10
Identity = 56/161 (34.78%), Postives = 79/161 (49.07%), Query Frame = 0
Query:   14 LSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNTDKEGA-SPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARLSRG 174
            L+ R   P++AP++   +   RMNP  ++P+ F+VA     G         +  FGQ+RP+        ELAS+ V P  R  GVG+ + +KL+       + GA S + L L+TL  T  FY    F  V  P       P  + LE  AGSVVARL+ G
Sbjct:   25 LAVRPAAPSEAPVLLSRLVRERMNPLSVDPERFLVAWDEPNG---------IAAFGQIRPL---GSDASELASLVVEPRYRGLGVGTMLAAKLLAR----HRSGADSSKPLYLVTLQRTQPFYERLGFAPVSSP-------PTEMRLEVAAGSVVARLAAG 162          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: CEM31012.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 72.0 bits (175), Expect = 2.200e-9
Identity = 60/165 (36.36%), Postives = 85/165 (51.52%), Query Frame = 0
Query:   17 RQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQPPLPPILVLEFLAGSVVARLSRGLGTKLVVM 182
            RQG  +D   IR  +    MNP FL  + F+ AE   +          ++GFGQVRP+ G     +E+AS++V  A R +G+GS IV +L+      ++ GA    L LLTL+ T  F+    F +V     A   LP +L LE  AG++VA     LG  +VVM
Sbjct:   60 RQGDESDLSKIRLVLASQLMNPLFLQAERFVCAEMDGR----------LIGFGQVRPLDGGGGS-FEVASLFVDEAERGKGIGSAIVRRLL------ERHGAK-GTLYLLTLSKTTPFWERFGFRLVGSDEDAS--LPALLRLERSAGTLVA--GGLLGQTVVVM 202          
BLAST of NO22G01680 vs. NCBI_GenBank
Match: XP_005539266.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM83230.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 68.9 bits (167), Expect = 1.800e-8
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 0
Query:   17 RQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAEQGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGSQIVSKLVQNFCNT--DKEGASPRRLVLLTLADTASFYIPHSFGVVP--DPVQAQPPLPPILVLEFLAGSVVARL 171
            R+G P D  +I +S+    MNP  +  + F+V E+    K+ ++    +VGFGQ+RP++  +    ELASVYV PA R +G+ S+IV+ L++    +     G   RR+  LT+ +  S Y    F   P          +P  L  E LAG VVA L
Sbjct:   48 RRGSPADRGVIFRSILSEGMNPLGIRTERFLVVEE----KDFQSQKNQIVGFGQLRPLSATD---LELASVYVAPAYRRRGIASRIVAHLLEEQRRSLHSVSGPKKRRIFCLTVGN-ESLYSRAGFTRFPLDQNFIWNSDIPCGLRFEMLAGRVVAAL 197          
The following BLAST results are available for this feature:
BLAST of NO22G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 12
Match NameE-valueIdentityDescription
EWM21526.11.700e-4658.66hypothetical protein Naga_100204g9 [Nannochloropsi... [more]
XP_005854123.11.700e-4658.66hypothetical protein NGA_2041000 [Nannochloropsis ... [more]
CBN74296.11.500e-1334.44conserved unknown protein [Ectocarpus siliculosus][more]
PSC69945.11.800e-1134.57GNAT family N-acetyltransferase [Micractinium cond... [more]
XP_002178633.15.200e-1133.70predicted protein [Phaeodactylum tricornutum CCAP ... [more]
PRW44440.13.400e-1034.39GCN5 family acetyltransferase [Chlorella sorokinia... [more]
XP_005760880.17.500e-1034.78hypothetical protein EMIHUDRAFT_249102 [Emiliania ... [more]
XP_005792994.17.500e-1034.78hypothetical protein EMIHUDRAFT_222679 [Emiliania ... [more]
CEM31012.12.200e-936.36unnamed protein product [Vitrella brassicaformis C... [more]
XP_005539266.11.800e-834.18hypothetical protein, conserved [Cyanidioschyzon m... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004093NSK004093Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01680.1NO22G01680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595895gene_7178Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100204g9gene8909Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01680.1NO22G01680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01680 ID=NO22G01680|Name=NO22G01680|organism=Nannochloropsis oceanica|type=gene|length=561bp
ATGATCCATGCCCGCTGTTCGGCCTCATGTCCTTTGGAGCTCAGCTTTCG
CCAAGGCCTCCCTACGGATGCACCACTCATCCGCCAAAGTATGCGAGATG
CGCGTATGAATCCTACATTTCTCAACCCCCAAAATTTTATCGTGGCGGAG
CAGGGCAGCCAAGGGAAAGAGAAAGAGACGGGTAGTGCGACGGTAGTCGG
GTTCGGACAAGTCCGTCCTGTTGCCGGCGCAAACGAGCATGTGTGGGAGC
TGGCGTCTGTGTATGTTCTCCCTGCAGCACGAGAACAAGGCGTGGGCTCC
CAGATTGTCTCAAAATTAGTGCAGAATTTCTGCAATACCGACAAGGAAGG
AGCCTCACCCCGTCGGCTGGTCCTCCTCACACTGGCTGACACCGCCTCTT
TCTACATCCCCCATTCCTTTGGGGTGGTACCTGACCCGGTGCAAGCACAA
CCACCATTACCACCCATCTTAGTCCTTGAATTTCTGGCTGGCTCGGTGGT
GGCTCGATTGTCAAGAGGGCTGGGCACGAAGTTGGTGGTCATGGAGCTGG
TCGGGAAGTAG
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protein sequence of NO22G01680.1

>NO22G01680.1-protein ID=NO22G01680.1-protein|Name=NO22G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=187bp
MIHARCSASCPLELSFRQGLPTDAPLIRQSMRDARMNPTFLNPQNFIVAE
QGSQGKEKETGSATVVGFGQVRPVAGANEHVWELASVYVLPAAREQGVGS
QIVSKLVQNFCNTDKEGASPRRLVLLTLADTASFYIPHSFGVVPDPVQAQ
PPLPPILVLEFLAGSVVARLSRGLGTKLVVMELVGK*
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Synonyms
Publications