NO22G01650, NO22G01650 (gene) Nannochloropsis oceanica

Overview
NameNO22G01650
Unique NameNO22G01650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2676
Alignment locationchr22:482381..485056 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:482381..485056 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01650.1NO22G01650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01650.1NO22G01650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01650 ID=NO22G01650|Name=NO22G01650|organism=Nannochloropsis oceanica|type=gene|length=2676bp
GTTCAACTCTCCCCAAAACCCTTAAATAGGCTATTTAAGGATTTTTAGCC
CTTAAATAGCGAATTCGGCGCTTCCATTTAAGGGCTGCCTATTTAAGAGC
AGGGCAGCGCCATAAATAATACTACCGTTAGTATTTAAGGTCTCTTCCTT
CCCAGCTGTCAAATAGCAACATTGCCCTTAAATAGAGAAAACGACCATTT
TAGTCGCTTCACCTTCCTTCATATGCTTGGTACGCCACAGATCACAAGAG
AGCAACACATATGAACCGATTTGTGGTGATGTGGGAGGGTGTGGACATAC
ACCTAAAAATAGAATGACCAAAAAAACACAAAAATCATCATCCCCTTTCT
TCACACTGCCCCCGTCGTTTCCTCGAGGTCTAGCAGCCTTTCATGCATCG
TACCATTAAGTGCGCAGCGCATCAAAGGGACTTCATGGTATATTGCCTTG
ACTGGTGCTTCACAGCGTAGGCTATGGGCGCTTGAGTGACTGGTGGGGGA
GCGAAATAAACACTCACCATTTTCTTCTTTCTTCCCCGTCCTTCCTACTC
ATGCACAGACATGTCAACACAAGCAAGCGACAATTCCTGTCAACCTGGGA
GCAACCTTGTCAACGAGGGGCAAGAGTTTGACTCAGACTCAGACTCTGAC
CCTGGCACCAATTCCCCGGACGCGGACACGAATGGCTCGAGTGACCAGGC
AGCACCCCTGGTCCATAGGGACCACGGGGCGGGGGTGGGGAAGAAACGCG
CCACCAGGAAGCAGACCACCAAAGCTTCCCCATTCCAAAAATTCCACTCC
AACCCTTACATCTTCGCCCTGTTTTTATATCTGAgtaagtgatgatgtgg
ctgtgtgagtgacatgtctgtgcatttgtgtttccattcttaactcacac
aactaccccaccacatcctcagTGGTGGATGGTCCCATTGACCTCACAGA
TGAAACCTTCGAGCATGGCCGAGTGGATTGGTTTTCACCCTTTGATCTAA
ACGGCCGGCGCAACATCGCCCTCCTCAAGTCCTGTGTCCAAAGACTACAG
GCCCTAATCAAAAAACACTACCCTGCTTTTGTGCCTGCCTTCGCTGGGTT
CACGGCGGACAAATGTAAGACCTACACTGACCAAATGTGGGTGAAGAGAA
GCGTCTGTAAGAGGGACGATGGAAAAATTGTACGGCTATGACAGAACACA
AATTACGAAATGGACCAACTACATGCTAGAGTACGTGTTCGATCAATGGG
CCTTCCTTCTGGACTTAAACGAGGAACGTTTGCCCAACAATGCACAGTAC
TCGTTCATCTTGTTTGACAAACGTTCCTCGTTTAAGTCCAGAAGGAAGGC
CCATTGATCGAACACGTACTCTAGCATGTAGTTGGTCCATTTCGTAATTT
GTGTTCTGTCATAGCCGTACAATTTTTCCATCGTCCCTCTTACAGAGTGA
GGATGAGCATTGCAGCCAAGAAGCATCACAAAGACCATTCCTCCACACAT
TTTTGGCATTCTGTCCATGTTGTTAGGCGGGTGATGAGGTAAATGGTAGG
AGAGCGGGAGAGAAAGTTATGGGTCAAGAACCACAGCGTGAGCCATTGGG
AAGAGTAGTACGTGTAAGATAGTCAATATTGGCCATGAGTGCTTACCCTT
CCAACTCGATAACTGTTTCGATGCGGAGTCTGGGGAACATGTACCACACT
TGTTCCTTGGTAAACCGGTGCATTTTCAGGAATAAATCATCGGTAAAGTC
TTCGAAGAGCTGCGGCAATGTACGAGGGCGGTTTGGATCGAGATTCCAAG
ACGTACGGGGAAACTGGTTGCCGCCAATTTCGTACATGTGCATGAAGAGT
AAGCAGAGTACGAGGTTGTTGTCATATTCCACATACATCATGTGTTGGTC
CATGTTGCGCAAACCAGCCCCACTCTGCCTTCGCAGACACTTCTTCAAGA
CAACGCTGTGTATGCGTTTGTGATTGTGTGAGGAGAGAGGGAAGAAGAAG
TCGTGAATGGCATCGTACGGTGAATAAAAGCGTCGTATGTGAGCATTCAA
ATGGTGTACCAGAGTTCAAAATTATTAGCCTCTATGGGCCTATGGGCCTG
TGGAGGCCACATCCCAGCTACCAAAAAAATCTGCCGGTAAATATAAATGA
CAAGAAGCACATGGACCCATTAACAATTGACTTTAGGGTCGCGCTAGTGC
TTGTCAAAAGTTGTTGTGGCTATGTATATAGACTTGCTATCACTATTTAA
GACTTGCTTTCGCTATTTAAGGGTGCTTCGCTATTTAGAGCATATCCGGC
CGGTTGAACACACACCTGGGCCAACAGTTAAATAGAGCTCTTAAATAATT
ATTTAAGAGTGGCTGCTATTTACGGGTGCGGAGTTGAACACACCCCCTCA
AGCAGCGAGTAGTGTTGATGGCGACTTCTGTCGATGGTATGACGTGCCGC
ACCACTTGGAAGTGTGTCTGTGTGATGCATATGACAGGTTTGAAGGTGCT
TTTGCCTTTTTCTACGCGTGATCGAGATATTTGAAGTTCTGGACCACTTG
TAAGGAGTTTTTGACGCTCCATTATTCATTCTGTAGATGTGGAAAGAGTC
TCCACTGTATTAACTTCGCAAAAGCAATGGAAATTCATCTTTAGTCCCAG
AGAGAATCCACAGGGAATTCGGGGGG
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protein sequence of NO22G01650.1

>NO22G01650.1-protein ID=NO22G01650.1-protein|Name=NO22G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MSTQASDNSCQPGSNLVNEGQEFDSDSDSDPGTNSPDADTNGSSDQAAPL
VHRDHGAGVGKKRATRKQTTKASPFQKFHSNPYIFALFLYLMVDGPIDLT
DETFEHGRVDWFSPFDLNGRRNIALLKSCVQRLQALIKKHYPAFVPAFAG
FTADKCKTYTDQMWVKRSVCKRDDGKIVRL*
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Synonyms
Publications