NO22G01650.1, NO22G01650.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G01650.1
Unique NameNO22G01650.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2588
Alignment locationchr22:482381..485056 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:482381..485056 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01650.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01650NO22G01650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G01650.1NO22G01650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G01650.1.cds1NO22G01650.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G01650.1.cds2NO22G01650.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G01650.1 ID=NO22G01650.1|Name=NO22G01650.1|organism=Nannochloropsis oceanica|type=mRNA|length=2588bp
GTTCAACTCTCCCCAAAACCCTTAAATAGGCTATTTAAGGATTTTTAGCC
CTTAAATAGCGAATTCGGCGCTTCCATTTAAGGGCTGCCTATTTAAGAGC
AGGGCAGCGCCATAAATAATACTACCGTTAGTATTTAAGGTCTCTTCCTT
CCCAGCTGTCAAATAGCAACATTGCCCTTAAATAGAGAAAACGACCATTT
TAGTCGCTTCACCTTCCTTCATATGCTTGGTACGCCACAGATCACAAGAG
AGCAACACATATGAACCGATTTGTGGTGATGTGGGAGGGTGTGGACATAC
ACCTAAAAATAGAATGACCAAAAAAACACAAAAATCATCATCCCCTTTCT
TCACACTGCCCCCGTCGTTTCCTCGAGGTCTAGCAGCCTTTCATGCATCG
TACCATTAAGTGCGCAGCGCATCAAAGGGACTTCATGGTATATTGCCTTG
ACTGGTGCTTCACAGCGTAGGCTATGGGCGCTTGAGTGACTGGTGGGGGA
GCGAAATAAACACTCACCATTTTCTTCTTTCTTCCCCGTCCTTCCTACTC
ATGCACAGACATGTCAACACAAGCAAGCGACAATTCCTGTCAACCTGGGA
GCAACCTTGTCAACGAGGGGCAAGAGTTTGACTCAGACTCAGACTCTGAC
CCTGGCACCAATTCCCCGGACGCGGACACGAATGGCTCGAGTGACCAGGC
AGCACCCCTGGTCCATAGGGACCACGGGGCGGGGGTGGGGAAGAAACGCG
CCACCAGGAAGCAGACCACCAAAGCTTCCCCATTCCAAAAATTCCACTCC
AACCCTTACATCTTCGCCCTGTTTTTATATCTGATGGTGGATGGTCCCAT
TGACCTCACAGATGAAACCTTCGAGCATGGCCGAGTGGATTGGTTTTCAC
CCTTTGATCTAAACGGCCGGCGCAACATCGCCCTCCTCAAGTCCTGTGTC
CAAAGACTACAGGCCCTAATCAAAAAACACTACCCTGCTTTTGTGCCTGC
CTTCGCTGGGTTCACGGCGGACAAATGTAAGACCTACACTGACCAAATGT
GGGTGAAGAGAAGCGTCTGTAAGAGGGACGATGGAAAAATTGTACGGCTA
TGACAGAACACAAATTACGAAATGGACCAACTACATGCTAGAGTACGTGT
TCGATCAATGGGCCTTCCTTCTGGACTTAAACGAGGAACGTTTGCCCAAC
AATGCACAGTACTCGTTCATCTTGTTTGACAAACGTTCCTCGTTTAAGTC
CAGAAGGAAGGCCCATTGATCGAACACGTACTCTAGCATGTAGTTGGTCC
ATTTCGTAATTTGTGTTCTGTCATAGCCGTACAATTTTTCCATCGTCCCT
CTTACAGAGTGAGGATGAGCATTGCAGCCAAGAAGCATCACAAAGACCAT
TCCTCCACACATTTTTGGCATTCTGTCCATGTTGTTAGGCGGGTGATGAG
GTAAATGGTAGGAGAGCGGGAGAGAAAGTTATGGGTCAAGAACCACAGCG
TGAGCCATTGGGAAGAGTAGTACGTGTAAGATAGTCAATATTGGCCATGA
GTGCTTACCCTTCCAACTCGATAACTGTTTCGATGCGGAGTCTGGGGAAC
ATGTACCACACTTGTTCCTTGGTAAACCGGTGCATTTTCAGGAATAAATC
ATCGGTAAAGTCTTCGAAGAGCTGCGGCAATGTACGAGGGCGGTTTGGAT
CGAGATTCCAAGACGTACGGGGAAACTGGTTGCCGCCAATTTCGTACATG
TGCATGAAGAGTAAGCAGAGTACGAGGTTGTTGTCATATTCCACATACAT
CATGTGTTGGTCCATGTTGCGCAAACCAGCCCCACTCTGCCTTCGCAGAC
ACTTCTTCAAGACAACGCTGTGTATGCGTTTGTGATTGTGTGAGGAGAGA
GGGAAGAAGAAGTCGTGAATGGCATCGTACGGTGAATAAAAGCGTCGTAT
GTGAGCATTCAAATGGTGTACCAGAGTTCAAAATTATTAGCCTCTATGGG
CCTATGGGCCTGTGGAGGCCACATCCCAGCTACCAAAAAAATCTGCCGGT
AAATATAAATGACAAGAAGCACATGGACCCATTAACAATTGACTTTAGGG
TCGCGCTAGTGCTTGTCAAAAGTTGTTGTGGCTATGTATATAGACTTGCT
ATCACTATTTAAGACTTGCTTTCGCTATTTAAGGGTGCTTCGCTATTTAG
AGCATATCCGGCCGGTTGAACACACACCTGGGCCAACAGTTAAATAGAGC
TCTTAAATAATTATTTAAGAGTGGCTGCTATTTACGGGTGCGGAGTTGAA
CACACCCCCTCAAGCAGCGAGTAGTGTTGATGGCGACTTCTGTCGATGGT
ATGACGTGCCGCACCACTTGGAAGTGTGTCTGTGTGATGCATATGACAGG
TTTGAAGGTGCTTTTGCCTTTTTCTACGCGTGATCGAGATATTTGAAGTT
CTGGACCACTTGTAAGGAGTTTTTGACGCTCCATTATTCATTCTGTAGAT
GTGGAAAGAGTCTCCACTGTATTAACTTCGCAAAAGCAATGGAAATTCAT
CTTTAGTCCCAGAGAGAATCCACAGGGAATTCGGGGGG
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protein sequence of NO22G01650.1

>NO22G01650.1-protein ID=NO22G01650.1-protein|Name=NO22G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MSTQASDNSCQPGSNLVNEGQEFDSDSDSDPGTNSPDADTNGSSDQAAPL
VHRDHGAGVGKKRATRKQTTKASPFQKFHSNPYIFALFLYLMVDGPIDLT
DETFEHGRVDWFSPFDLNGRRNIALLKSCVQRLQALIKKHYPAFVPAFAG
FTADKCKTYTDQMWVKRSVCKRDDGKIVRL*
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mRNA from alignment at chr22:482381..485056-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G01650.1 ID=NO22G01650.1|Name=NO22G01650.1|organism=Nannochloropsis oceanica|type=mRNA|length=2676bp|location=Sequence derived from alignment at chr22:482381..485056- (Nannochloropsis oceanica)
GTTCAACTCTCCCCAAAACCCTTAAATAGGCTATTTAAGGATTTTTAGCC
CTTAAATAGCGAATTCGGCGCTTCCATTTAAGGGCTGCCTATTTAAGAGC
AGGGCAGCGCCATAAATAATACTACCGTTAGTATTTAAGGTCTCTTCCTT
CCCAGCTGTCAAATAGCAACATTGCCCTTAAATAGAGAAAACGACCATTT
TAGTCGCTTCACCTTCCTTCATATGCTTGGTACGCCACAGATCACAAGAG
AGCAACACATATGAACCGATTTGTGGTGATGTGGGAGGGTGTGGACATAC
ACCTAAAAATAGAATGACCAAAAAAACACAAAAATCATCATCCCCTTTCT
TCACACTGCCCCCGTCGTTTCCTCGAGGTCTAGCAGCCTTTCATGCATCG
TACCATTAAGTGCGCAGCGCATCAAAGGGACTTCATGGTATATTGCCTTG
ACTGGTGCTTCACAGCGTAGGCTATGGGCGCTTGAGTGACTGGTGGGGGA
GCGAAATAAACACTCACCATTTTCTTCTTTCTTCCCCGTCCTTCCTACTC
ATGCACAGACATGTCAACACAAGCAAGCGACAATTCCTGTCAACCTGGGA
GCAACCTTGTCAACGAGGGGCAAGAGTTTGACTCAGACTCAGACTCTGAC
CCTGGCACCAATTCCCCGGACGCGGACACGAATGGCTCGAGTGACCAGGC
AGCACCCCTGGTCCATAGGGACCACGGGGCGGGGGTGGGGAAGAAACGCG
CCACCAGGAAGCAGACCACCAAAGCTTCCCCATTCCAAAAATTCCACTCC
AACCCTTACATCTTCGCCCTGTTTTTATATCTGAGTAAGTGATGATGTGG
CTGTGTGAGTGACATGTCTGTGCATTTGTGTTTCCATTCTTAACTCACAC
AACTACCCCACCACATCCTCAGTGGTGGATGGTCCCATTGACCTCACAGA
TGAAACCTTCGAGCATGGCCGAGTGGATTGGTTTTCACCCTTTGATCTAA
ACGGCCGGCGCAACATCGCCCTCCTCAAGTCCTGTGTCCAAAGACTACAG
GCCCTAATCAAAAAACACTACCCTGCTTTTGTGCCTGCCTTCGCTGGGTT
CACGGCGGACAAATGTAAGACCTACACTGACCAAATGTGGGTGAAGAGAA
GCGTCTGTAAGAGGGACGATGGAAAAATTGTACGGCTATGACAGAACACA
AATTACGAAATGGACCAACTACATGCTAGAGTACGTGTTCGATCAATGGG
CCTTCCTTCTGGACTTAAACGAGGAACGTTTGCCCAACAATGCACAGTAC
TCGTTCATCTTGTTTGACAAACGTTCCTCGTTTAAGTCCAGAAGGAAGGC
CCATTGATCGAACACGTACTCTAGCATGTAGTTGGTCCATTTCGTAATTT
GTGTTCTGTCATAGCCGTACAATTTTTCCATCGTCCCTCTTACAGAGTGA
GGATGAGCATTGCAGCCAAGAAGCATCACAAAGACCATTCCTCCACACAT
TTTTGGCATTCTGTCCATGTTGTTAGGCGGGTGATGAGGTAAATGGTAGG
AGAGCGGGAGAGAAAGTTATGGGTCAAGAACCACAGCGTGAGCCATTGGG
AAGAGTAGTACGTGTAAGATAGTCAATATTGGCCATGAGTGCTTACCCTT
CCAACTCGATAACTGTTTCGATGCGGAGTCTGGGGAACATGTACCACACT
TGTTCCTTGGTAAACCGGTGCATTTTCAGGAATAAATCATCGGTAAAGTC
TTCGAAGAGCTGCGGCAATGTACGAGGGCGGTTTGGATCGAGATTCCAAG
ACGTACGGGGAAACTGGTTGCCGCCAATTTCGTACATGTGCATGAAGAGT
AAGCAGAGTACGAGGTTGTTGTCATATTCCACATACATCATGTGTTGGTC
CATGTTGCGCAAACCAGCCCCACTCTGCCTTCGCAGACACTTCTTCAAGA
CAACGCTGTGTATGCGTTTGTGATTGTGTGAGGAGAGAGGGAAGAAGAAG
TCGTGAATGGCATCGTACGGTGAATAAAAGCGTCGTATGTGAGCATTCAA
ATGGTGTACCAGAGTTCAAAATTATTAGCCTCTATGGGCCTATGGGCCTG
TGGAGGCCACATCCCAGCTACCAAAAAAATCTGCCGGTAAATATAAATGA
CAAGAAGCACATGGACCCATTAACAATTGACTTTAGGGTCGCGCTAGTGC
TTGTCAAAAGTTGTTGTGGCTATGTATATAGACTTGCTATCACTATTTAA
GACTTGCTTTCGCTATTTAAGGGTGCTTCGCTATTTAGAGCATATCCGGC
CGGTTGAACACACACCTGGGCCAACAGTTAAATAGAGCTCTTAAATAATT
ATTTAAGAGTGGCTGCTATTTACGGGTGCGGAGTTGAACACACCCCCTCA
AGCAGCGAGTAGTGTTGATGGCGACTTCTGTCGATGGTATGACGTGCCGC
ACCACTTGGAAGTGTGTCTGTGTGATGCATATGACAGGTTTGAAGGTGCT
TTTGCCTTTTTCTACGCGTGATCGAGATATTTGAAGTTCTGGACCACTTG
TAAGGAGTTTTTGACGCTCCATTATTCATTCTGTAGATGTGGAAAGAGTC
TCCACTGTATTAACTTCGCAAAAGCAATGGAAATTCATCTTTAGTCCCAG
AGAGAATCCACAGGGAATTCGGGGGG
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Coding sequence (CDS) from alignment at chr22:482381..485056-

>NO22G01650.1 ID=NO22G01650.1|Name=NO22G01650.1|organism=Nannochloropsis oceanica|type=CDS|length=543bp|location=Sequence derived from alignment at chr22:482381..485056- (Nannochloropsis oceanica)
ATGTCAACACAAGCAAGCGACAATTCCTGTCAACCTGGGAGCAACCTTGT
CAACGAGGGGCAAGAGTTTGACTCAGACTCAGACTCTGACCCTGGCACCA
ATTCCCCGGACGCGGACACGAATGGCTCGAGTGACCAGGCAGCACCCCTG
GTCCATAGGGACCACGGGGCGGGGGTGGGGAAGAAACGCGCCACCAGGAA
GCAGACCACCAAAGCTTCCCCATTCCAAAAATTCCACTCCAACCCTTACA
TCTTCGCCCTGTTTTTATATCTGATGGTGGATGGTCCCATTGACCTCACA
GATGAAACCTTCGAGCATGGCCGAGTGGATTGGTTTTCACCCTTTGATCT
AAACGGCCGGCGCAACATCGCCCTCCTCAAGTCCTGTGTCCAAAGACTAC
AGGCCCTAATCAAAAAACACTACCCTGCTTTTGTGCCTGCCTTCGCTGGG
TTCACGGCGGACAAATGTAAGACCTACACTGACCAAATGTGGGTGAAGAG
AAGCGTCTGTAAGAGGGACGATGGAAAAATTGTACGGCTATGA
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Synonyms
Publications