NO22G01500, NO22G01500 (gene) Nannochloropsis oceanica

Overview
NameNO22G01500
Unique NameNO22G01500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length386
Alignment locationchr22:444939..445324 +

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Properties
Property NameValue
DescriptionUncharacterised protein family SERF
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:444939..445324 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO22G01500 vs. NCBI_GenBank
Match: KUI58687.1 (hypothetical protein VP1G_05982 [Valsa mali var. pyri] >KUI70678.1 hypothetical protein VM1G_06120 [Valsa mali])

HSP 1 Score: 76.3 bits (186), Expect = 4.800e-11
Identity = 44/77 (57.14%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFPTLDA 78
            MGGGNGAKSA KRERNAK  G EAKS LK   +     C +C +TF+ T + P L  HA+ KH K TLA+CFPT  A
Sbjct:    1 MGGGNGAKSAQKRERNAKNAGKEAKSQLKVNEQAKDIQCKVCFSTFLKTTRGPALTEHAANKHSK-TLAECFPTYTA 76          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: ERS99711.1 (hypothetical protein HMPREF1624_03075 [Sporothrix schenckii ATCC 58251] >KIH91891.1 hypothetical protein SPBR_02098 [Sporothrix brasiliensis 5110])

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-10
Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFPTLDA 78
            MGGGNGAK+A KRERNAK K   AKS LK   K ++  C +C+ATF+ T +   L  HA+ KH K TLA CFP   A
Sbjct:    1 MGGGNGAKAAQKRERNAKDKAGAAKSQLKTNEKALNIQCFVCKATFLSTTRENALNDHATNKHSK-TLADCFPDFKA 76          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: OAA54979.1 (putative protein family SERF [Sporothrix insectorum RCEF 264])

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-10
Identity = 43/77 (55.84%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFPTLDA 78
            MGGGNGAK+A KRERNAK K   AKS LK   K ++  C  C+ATF+ T +   L  HAS KH K TLA CFP+  A
Sbjct:    1 MGGGNGAKAAQKRERNAKEKAGGAKSQLKANEKALNIQCQTCKATFLSTTRENALTDHASNKHSK-TLADCFPSFKA 76          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: KIM32736.1 (hypothetical protein M408DRAFT_326478 [Serendipita vermifera MAFF 305830])

HSP 1 Score: 73.6 bits (179), Expect = 3.100e-10
Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFPTLDA 78
            MGGGNGAK+A KR RNAK  G  AKS LK      S +C +C+ +F  T + P LE HA+ +H K TLA+CFP+ +A
Sbjct:    1 MGGGNGAKAAQKRARNAKEAGTSAKSSLKSNEAAKSIICGVCKQSFFITTRAPALEEHATNRHSK-TLAECFPSFNA 76          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: SAM82082.1 (uncharacterized protein UBRO_04358 [Ustilago bromivora])

HSP 1 Score: 72.8 bits (177), Expect = 5.300e-10
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    4 GNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFPT 75
            GNGAK+  KRERNAKA G EAKS  K      + MCM CR TF+ T + P L+ HAS +H K TLA+CFPT
Sbjct:    2 GNGAKAQQKRERNAKAAGGEAKSQKKVNEAAKNVMCMTCRQTFLLTVREPALQQHASDRHNK-TLAECFPT 71          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: XP_003346224.1 (uncharacterized protein SMAC_05761 [Sordaria macrospora k-hell] >CCC08516.1 unnamed protein product [Sordaria macrospora k-hell])

HSP 1 Score: 71.2 bits (173), Expect = 1.600e-9
Identity = 41/73 (56.16%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFP 74
            MGGGNGAK+A KRERNAK      KS LK  A  M+ +C  CRATF+ T++   L+ HA  KH K TLA CFP
Sbjct:    1 MGGGNGAKAAQKRERNAKNAAAGPKSQLKTNAAAMNIICQTCRATFLSTSRAKALDEHAQNKHSK-TLADCFP 72          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: CDP22572.1 (Putative protein of unknown function [Podospora anserina S mat+])

HSP 1 Score: 71.2 bits (173), Expect = 1.600e-9
Identity = 40/75 (53.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHAST-KHP-KDTLAKCFP 74
            MGGGNGAK+A KR RNAK   P+A S LK   K M+ +C IC+ TF+ T+++P+LE H+S+ KH  K T  +CFP
Sbjct:    1 MGGGNGAKAAQKRARNAKDAAPKAASQLKSNEKAMNIICNICKQTFLSTSRKPQLEQHSSSGKHAGKHTFEQCFP 75          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: KNE91168.1 (hypothetical protein PSTG_15424 [Puccinia striiformis f. sp. tritici PST-78])

HSP 1 Score: 71.2 bits (173), Expect = 1.600e-9
Identity = 40/73 (54.79%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFP 74
            MGGGNGAK+A KRERNAKA G  AKS LK     M+  C +C  TF+ T++ P L+ HA  KH K  L +CFP
Sbjct:    1 MGGGNGAKAAQKRERNAKASGATAKSQLKVNEAAMNIQCKVCFQTFLQTSREPALKEHAENKHSK-ALLECFP 72          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: CBQ73127.1 (conserved hypothetical protein [Sporisorium reilianum SRZ2] >SJX62964.1 uncharacterized protein SRS1_13788 [Sporisorium reilianum f. sp. reilianum])

HSP 1 Score: 70.9 bits (172), Expect = 2.000e-9
Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    4 GNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFP 74
            GNGAK+  KRERNAKA G EAKS  K      + MCM CR TF+ T + P L+ HAS +H K TLA+CFP
Sbjct:    2 GNGAKAQQKRERNAKAAGGEAKSQKKVNEAAKNVMCMTCRQTFLLTVREPALQQHASDRHNK-TLAECFP 70          
BLAST of NO22G01500 vs. NCBI_GenBank
Match: XP_024327851.1 (hypothetical protein VC83_01299 [Pseudogymnoascus destructans] >ELR06169.1 hypothetical protein GMDG_07824 [Pseudogymnoascus destructans 20631-21] >OAF62579.1 hypothetical protein VC83_01299 [Pseudogymnoascus destructans])

HSP 1 Score: 70.9 bits (172), Expect = 2.000e-9
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTAKRPELEAHASTKHPKDTLAKCFP 74
            MGGGNGAK+ASKRER AK   P AKS  K   + M   C IC+ATF+ T++ P L  HA+ KH K TL +CFP
Sbjct:    1 MGGGNGAKAASKRERAAKDAKPAAKSQKKVNERAMDVQCNICKATFLKTSRAPALTEHATNKHSK-TLPECFP 72          
The following BLAST results are available for this feature:
BLAST of NO22G01500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KUI58687.14.800e-1157.14hypothetical protein VP1G_05982 [Valsa mali var. p... [more]
ERS99711.11.400e-1054.55hypothetical protein HMPREF1624_03075 [Sporothrix ... [more]
OAA54979.11.400e-1055.84putative protein family SERF [Sporothrix insectoru... [more]
KIM32736.13.100e-1051.95hypothetical protein M408DRAFT_326478 [Serendipita... [more]
SAM82082.15.300e-1057.75uncharacterized protein UBRO_04358 [Ustilago bromi... [more]
XP_003346224.11.600e-956.16uncharacterized protein SMAC_05761 [Sordaria macro... [more]
CDP22572.11.600e-953.33Putative protein of unknown function [Podospora an... [more]
KNE91168.11.600e-954.79hypothetical protein PSTG_15424 [Puccinia striifor... [more]
CBQ73127.12.000e-957.14conserved hypothetical protein [Sporisorium reilia... [more]
XP_024327851.12.000e-956.16hypothetical protein VC83_01299 [Pseudogymnoascus ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004111NSK004111Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01500.1NO22G01500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595827gene_7161Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01500.1NO22G01500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01500 ID=NO22G01500|Name=NO22G01500|organism=Nannochloropsis oceanica|type=gene|length=386bp
ATGGGTGGAGGCAACGGTGCGAAGTCAGCTTCGAAGCGCGAACGAAACGC
CAAGGCCAAGGGCCCCGAGGCGAAGTCTATCCTGAAGGAGAAGGCAAAGA
TGATGAGCCAGATGTGCATGATTTGCCGAgtaagtaatgccttgagaagg
aattggagagggggtatcgggaggaatagggtctaagagaacttttgtgt
taggtgaatataattttgtgaggtttctttcttcctcttaactttcctcc
ttccctcatcaatctacccacccacacatagGCCACTTTCATGTGCACGG
CAAAGCGACCCGAACTGGAGGCACACGCCTCGACCAAGCACCCCAAGGAC
ACCCTTGCCAAGTGCTTTCCTACTCTGGACGCGTAA
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protein sequence of NO22G01500.1

>NO22G01500.1-protein ID=NO22G01500.1-protein|Name=NO22G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=78bp
MGGGNGAKSASKRERNAKAKGPEAKSILKEKAKMMSQMCMICRATFMCTA
KRPELEAHASTKHPKDTLAKCFPTLDA*
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Synonyms
Publications