NO22G01470, NO22G01470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01470 vs. NCBI_GenBank
Match: EWM21502.1 (Alanyl-tRNA synthetase, class IIc [Nannochloropsis gaditana]) HSP 1 Score: 301.6 bits (771), Expect = 2.700e-78 Identity = 162/288 (56.25%), Postives = 203/288 (70.49%), Query Frame = 0 Query: 9 TERLYLDDTHLYTTTSTVLAVEPV---TVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGGNLCLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL-KVGAEEEV 293 T+R YL+DT+LY +ST+LAVEP+ T G F +V TVFHPQGGGQPSDVG +V G+ GVTF VD+VR GE +IYH+GT ++EDG +PF G+ V LEIDA RRLH+RLHSAGHALDVAVL+LG++LRP+KGYHF+D P+VEY GRL + G++ + ALT K++ L+E DI E+ TSK +AA +L GG DVAHF E A VRLVSVGGN+C CGGTHVKST EL VE+T+IKTKK+VT+ISYR+ K G E ++ Sbjct: 9 TQRRYLNDTYLYDISSTILAVEPMPPDTSAGSNKMPYFGLVIAETVFHPQGGGQPSDVGRVV--GENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDG------------ARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQI 282
BLAST of NO22G01470 vs. NCBI_GenBank
Match: XP_005856270.1 (alanyl-trna synthetase, partial [Nannochloropsis gaditana CCMP526] >EKU20086.1 alanyl-trna synthetase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 273.1 bits (697), Expect = 1.000e-69 Identity = 143/244 (58.61%), Postives = 177/244 (72.54%), Query Frame = 0 Query: 50 TVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGGNLCLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL-KVGAEEEV 293 TVFHPQGGGQPSDVG +V G+ GVTF VD+VR GE +IYH+GT ++EDG +PF G+ V LEIDA RRLH+RLHSAGHALDVAVL+LG++LRP+KGYHF+D P+VEY GRL + G++ + ALT K++ L+E DI E+ TSK +AA +L GG DVAHF E A VRLVSVGGN+C CGGTHVKST EL VE+T+IKTKK+VT+ISYR+ K G E ++ Sbjct: 3 TVFHPQGGGQPSDVGRVV--GENGVTFFVDNVRVGENAIIYHYGTFQHEMSENEDG------------ARCIPFRSGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLELRPTKGYHFEDHPFVEYLGRLPADKGSSERLIEALTLKIQELIEEDIATELYSTSKAEAASILSGGVKDVAHFPEGAQVRLVSVGGNICPCGGTHVKSTKELRGVEITRIKTKKNVTKISYRISKEGKERQI 232
BLAST of NO22G01470 vs. NCBI_GenBank
Match: AML47757.1 (putative alanyl-tRNA synthase [Triticum aestivum] >AOZ21501.1 putative alanyl-tRNA synthetase [Triticum aestivum]) HSP 1 Score: 167.5 bits (423), Expect = 6.100e-38 Identity = 107/283 (37.81%), Postives = 145/283 (51.24%), Query Frame = 0 Query: 3 SCPLRPTERLYLDDTHLYTTTSTVLAVEPVTVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGGNL-CLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL 285 + P PT Y DD T+TVL++ ++ R VV +ATVFHPQGGGQP+D G IV AG F+V+ VR + GV H+G G F GQ+VTLE+DA+ R+L+SRLHSAGH LD + LG+ L P KGYHF D P VEY G + A + L ++ L+ V V +AAKL G ++ +++ R+V G C CGGTHV ++G V+VT I+ KK VT++SY + Sbjct: 2 AAPAGPTRLAYFDDMWALRATTTVLSLH------QEEGGRRAVVLDATVFHPQGGGQPADTGVIVSASGAGARFLVEDVRV-KDGVALHYGRFEDAAAGDGCG---------------ADFTQGQSVTLEVDAERRKLNSRLHSAGHLLDSCMTNLGLHLEPGKGYHFPDGPSVEYKG--VVPADQLQDKKIQLEKEANELISKGSKVLVSVFPYEEAAKLCGGALP--SYILQDSTPRIVKFGNYPGCPCGGTHVADIADIGNVKVTNIRVKKGVTKVSYSI 258
BLAST of NO22G01470 vs. NCBI_GenBank
Match: CBH32647.1 (alanyl-tRNA synthetase, putative, expressed [Triticum aestivum] >CDM80421.1 unnamed protein product [Triticum aestivum]) HSP 1 Score: 164.1 bits (414), Expect = 6.800e-37 Identity = 103/283 (36.40%), Postives = 144/283 (50.88%), Query Frame = 0 Query: 3 SCPLRPTERLYLDDTHLYTTTSTVLAVEPVTVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGGNL-CLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL 285 + P PT Y DD +TVL++ ++ R VV +ATVFHPQGGGQP+D G IV G F+V+ VR + GV++H+G E GQ+V+LEIDA+ R+L+SRLHSAGH LD + LG+ L P KGYHF D P VEY G + A + L ++ L+ V V +AAKL G ++ +++ R+V G C CGGTHV ++G ++VT I+ KK VT++SY + Sbjct: 2 AAPAGPTRLAYFDDMWALRAPATVLSLH------QEEGGRRAVVLDATVFHPQGGGQPADTGAIVSAAGTGARFLVEDVRV-KDGVVFHYGRFEDAAAGEE-------------------LSQGQSVSLEIDAERRKLNSRLHSAGHLLDSCMTNLGLHLEPGKGYHFPDGPSVEYKG--VVPADQLQDKKIQLEKEANELISKGSKVLVSVFPYEEAAKLCGGALP--SYIPQDSTPRIVKFGNYPGCPCGGTHVADIADIGNLKVTNIRVKKGVTKVSYSI 254
BLAST of NO22G01470 vs. NCBI_GenBank
Match: XP_004339020.1 (threonine/alanine tRNA ligase subfamily protein [Acanthamoeba castellanii str. Neff] >ELR17007.1 threonine/alanine tRNA ligase subfamily protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 163.7 bits (413), Expect = 8.800e-37 Identity = 114/285 (40.00%), Postives = 143/285 (50.18%), Query Frame = 0 Query: 7 RPTERLYLDDTHLYTTTSTVLAV--EPVTVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSG-EGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQL--GMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVT-SKVDAAKLLPGGKDDVAHFAEEALVRLVSVGGNL-CLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL 285 R TE+ Y +DT+ + T+ V+ V P + F VV + T+FHPQGGGQP D G + AGV F V VR+ E GVI H GT A F G V L+ID RRLH+RLHSAGH LD AV L L P KGYHF DAPYVEY G +P A L ++ L+ V+V SK + +L D A+ E VR+V+V L C CGGTHV++TGE+G + + K+ KK V RISY L Sbjct: 4 RRTEQAYWEDTYRFRDTAHVVQVAEHPPPRGSAAGASYFAVVLDRTIFHPQGGGQPFDTGVVA--SAAGVKFTVSEVRANREDGVIQHIGTFAEA---------------------GTTFQAGDEVELQIDEAKRRLHARLHSAGHLLDKAVANLFPEYNLIPDKGYHFADAPYVEYKGTFVP-ADKRQSALKRLEDECNRLIAEGSEVTVQVVHSKEEVERLCGSASDSGANPTEP--VRVVTVCAPLGCPCGGTHVQNTGEIGRIAIPKMSAKKGVVRISYTL 262
BLAST of NO22G01470 vs. NCBI_GenBank
Match: GBG35074.1 (Cysteine desulfurase, mitochondrial, partial [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 160.6 bits (405), Expect = 7.500e-36 Identity = 106/284 (37.32%), Postives = 141/284 (49.65%), Query Frame = 0 Query: 8 PTERLYLDDTHLY-TTTSTVLAVEPVTV------PGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEAL-VRLVSVGGNL-CLCGGTHVKSTGELGMVEVTKIKTKKDVTRISY 283 PT Y+DDTH + + VL VE V P + RF ++ AT+FHPQGGGQPSDVG I+ D +G FVVD V G + H G + VG V L ID RR H+R+HSAGH LD A+ G L P+KGYHF P V+Y G + A + A+ + L++ IP V T +A + G + ++A +RLV VGG+ C CGGTHVK+T E+G V + K+++KK RISY Sbjct: 372 PTRLAYMDDTHCFKMDDAQVLKVEAVESAPKTDDPSTPTNERFCIILNATIFHPQGGGQPSDVGEII-DVASGTRFVVDHVEKDANGCVRHLGEFQGSQPS--------------------AIVVGSQVNLVIDERKRRFHARIHSAGHVLDQAMRLAGCSLLPTKGYHFPSGPSVDYAGSV--PAAERAALQDAVEKHANALIQQAIPTRVLQTRIAEAGEYCLDGLAPSSDGIDDAKDIRLVLVGGDRGCPCGGTHVKNTSEIGAVRIRKLQSKKGNLRISY 632
BLAST of NO22G01470 vs. NCBI_GenBank
Match: BAJ95202.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 159.8 bits (403), Expect = 1.300e-35 Identity = 101/283 (35.69%), Postives = 146/283 (51.59%), Query Frame = 0 Query: 3 SCPLRPTERLYLDDTHLYTTTSTVLAVEPVTVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGG-NLCLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL 285 + P PT Y DD + VL+V ++ R VV +AT+FHPQGGGQP+D G IV + F+V+ VR + GV++H+G + DG GQ+V++EIDAD R+L+SRLHSAGH LD + LG+ + P KGYHF D P+VEY G + + L ++ L+ V V +AAKL G ++ +E++ R+V G C CGGTHV ++G ++VT I+ KK VT++SY + Sbjct: 2 AAPAGPTRLAYFDDMWALRAPAAVLSVHQAPGCPQEEGGRRAVVLDATIFHPQGGGQPADTGVIV----SAARFLVEDVRV-KDGVVFHYGRF-----EDADGE---------------ELSQGQSVSMEIDADRRKLNSRLHSAGHLLDSCMTNLGLHMEPGKGYHFPDGPFVEYKG--VVPTDQLQDTKIQLEKEANELISKGAKVLVSVFPYEEAAKLCGGALP--SYISEDSTPRIVKFGDCPGCPCGGTHVADITDIGNLKVTNIRVKKGVTKVSYSI 255
BLAST of NO22G01470 vs. NCBI_GenBank
Match: BAJ98165.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 157.5 bits (397), Expect = 6.300e-35 Identity = 101/283 (35.69%), Postives = 146/283 (51.59%), Query Frame = 0 Query: 3 SCPLRPTERLYLDDTHLYTTTSTVLAVEPVTVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGG-NLCLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL 285 + P PT Y DD + VL+V ++ R VV +AT+FHPQGGGQP+D G IV + F+V+ VR + GV++H+G + DG GQ+V++EIDAD R+L+SRLHSAGH LD + LG+ + P KGYHF D P+VEY G + + L ++ L+ V V +AAKL G ++ +E++ R+V G C CGGTHV ++G ++VT I+ KK VT++SY + Sbjct: 2 AAPAGPTRLAYFDDMWALRAPAAVLSVH------QEEGGRRAVVLDATIFHPQGGGQPADTGVIV----SAARFLVEDVRV-KDGVVFHYGRF-----EDADGE---------------ELSQGQSVSMEIDADRRKLNSRLHSAGHLLDSCMTNLGLHMEPGKGYHFPDGPFVEYKG--VVPTDQLQDTKIQLEKEANELISKGAKVLVSVFPYEEAAKLCGGALP--SYISEDSTPRIVKFGDCPGCPCGGTHVADITDIGNLKVTNIRVKKGVTKVSYSI 249
BLAST of NO22G01470 vs. NCBI_GenBank
Match: XP_003567700.1 (uncharacterized protein LOC100840915 [Brachypodium distachyon] >KQK02451.1 hypothetical protein BRADI_2g01511v3 [Brachypodium distachyon]) HSP 1 Score: 157.1 bits (396), Expect = 8.300e-35 Identity = 105/287 (36.59%), Postives = 150/287 (52.26%), Query Frame = 0 Query: 8 PTERL-YLDDTHLYTTTSTVLAVEPVTVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDG-DAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPE-----AGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGGNL-CLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRLKV 287 PT RL Y DD + + VL++ ++ R VV +AT+FHPQGGGQP+D G I G AG F+V+ VR + GV++H+G D DG GQ VTLEID + R L+SRLHSAGH LD V G+ P KGYHF D P+VEY G + P+ +VA L K + ++ + P+E +AAKL G ++ E++ R+V G + C CGGTHV ++G ++VT ++ KK +T++SY + + Sbjct: 7 PTTRLAYFDDMWAVHSQAAVLSLH------QEEGGRRAVVLDATIFHPQGGGQPADTGVISAAGAGAGARFLVEDVRM-KDGVVFHYGRF---EDAAGDGCRTELIE-------------GQNVTLEIDVERRNLNSRLHSAGHLLDFCVSNAGLHFEPGKGYHFPDGPFVEYKGVVPPDQLQVKKQELEKVANELISKGEKVLVSVFPYE-------EAAKLCGGALP--SYIPEDSTPRIVKFGDHPGCPCGGTHVADIADIGNLKVTNMRVKKGITKVSYSISL 261
BLAST of NO22G01470 vs. NCBI_GenBank
Match: XP_020190630.1 (uncharacterized protein LOC109776404 [Aegilops tauschii subsp. tauschii] >CCG48002.1 alanyl-tRNA synthetase, putative, expressed [Triticum aestivum]) HSP 1 Score: 156.8 bits (395), Expect = 1.100e-34 Identity = 102/283 (36.04%), Postives = 145/283 (51.24%), Query Frame = 0 Query: 3 SCPLRPTERLYLDDTHLYTTTSTVLAVEPVTVPGDKDSMRFTVVTEATVFHPQGGGQPSDVGCIVCDGDAGVTFVVDSVRSGEGGVIYHFGTLASTTDQHEDGXXXXXXXXXXXXXXXLPFHVGQAVTLEIDADSRRLHSRLHSAGHALDVAVLQLGMQLRPSKGYHFQDAPYVEYFGRLLPEAGTAVEVATALTEKMKTLVEADIPFEVKVTSKVDAAKLLPGGKDDVAHFAEEALVRLVSVGGNL-CLCGGTHVKSTGELGMVEVTKIKTKKDVTRISYRL 285 + P T Y +D +TVL++ ++ R VV +ATVFHPQGGGQP+D G IV G F+V+ VR + GV++H+G G F GQ+VTLE+DA+ R+L+SRLHSAGH LD + LG+ L P KGYHF D P VEY G + A + L ++ L+ V V +AAKL G ++ ++++ R+V G C CGGTHV ++G ++VT I+ KK VT++SY + Sbjct: 2 AAPAGHTRLAYFEDMWALRAPATVLSLH------QEEGGRRAVVLDATVFHPQGGGQPADTGVIV-SASGGARFLVEDVRV-KDGVVFHYGRFEDAAAGDGCG---------------AEFTKGQSVTLEVDAERRKLNSRLHSAGHLLDSCMTNLGLHLEPGKGYHFPDGPSVEYKG--VVPADQLQDKKIQLEKEANELILKGSKVLVSVFPYEEAAKLCGGALP--SYISQDSTPRIVKFGDYPGCPCGGTHVADIADIGNLKVTNIRVKKGVTKVSYSI 257 The following BLAST results are available for this feature:
BLAST of NO22G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01470 ID=NO22G01470|Name=NO22G01470|organism=Nannochloropsis oceanica|type=gene|length=1187bpback to top protein sequence of NO22G01470.1 >NO22G01470.1-protein ID=NO22G01470.1-protein|Name=NO22G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=299bpback to top Synonyms
Publications
|