NO22G01420, NO22G01420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO22G01420 vs. NCBI_GenBank
Match: EWM21487.1 (hypothetical protein Naga_100019g62 [Nannochloropsis gaditana]) HSP 1 Score: 492.7 bits (1267), Expect = 1.200e-135 Identity = 261/373 (69.97%), Postives = 313/373 (83.91%), Query Frame = 0 Query: 4 SSSSAQGQALSPPSDEEATNGPGASLHGVSAHGLVSLERAEHILQRVIDTVNDQGLQISSLYLLLQTLVGTETNPLPRSLLNVEGNFSRLNHRLDRVEKAIHVPGVAPSVPIGEVVSTNGVELNHALDVLHKKANQADVEARQHKLEEEVAEVYAWAGARELVERLEESNRATRTQVQAMEAALGCKVDKVEMAGMEATLNRIKIYNSRMEGLEQGQAQDMARVRAEVQLLQERRIAADQQLEVTRKALGALEEKHGAWKRETLELMKEVDGELAQMASLSQLEGKLDARVWEREWRLACERLDSKVDLPEMAAMAERVGGVEEDVVRLGRESDQYSRFVAWFYSRGEAYEHNLNALDRTIGRLAKESLGKYL 377 S+SSA + P SD N P ASL GVSA GLVSLERAE ILQR+IDTVN+QGLQISS++LLLQTLVGT+T PLPRSLL+VEG FSRL+HRL+R+E+AI VPG+AP V IGEVV+ NGVELNHA + L KA++ADVE RQHKLEEEVA VYAWAGARELVERLEESNRATR QV AME ALGCK+DK E+AGMEAT+NR+K +++RME LE+G Q+MA V+A+VQ L+E R+ D+ + TR+A+G LEE+HGAWK ETLEL+KEVD ELA AS++QLE KLDARVWEREWR ACERLD KVD+PEM A+AER+ V D+V+L RESDQYSRFVAW+YSRG+AYEHN+ L+RT+GRLA++SL K++ Sbjct: 3 SASSASIASALPASD---PNFP-ASLQGVSARGLVSLERAEQILQRLIDTVNEQGLQISSIFLLLQTLVGTDTQPLPRSLLDVEGKFSRLSHRLERIEQAIQVPGLAPGVSIGEVVNANGVELNHAAEALLTKADKADVEVRQHKLEEEVAGVYAWAGARELVERLEESNRATRVQVHAMETALGCKLDKSELAGMEATVNRLKAFDARMETLERGHVQNMADVQAKVQALEEHRMETDRLVGATRRAVGELEERHGAWKMETLELLKEVDKELAATASVTQLERKLDARVWEREWRSACERLDQKVDVPEMVALAERLESVAGDLVKLSRESDQYSRFVAWYYSRGQAYEHNMQTLNRTLGRLARDSLLKHV 371
BLAST of NO22G01420 vs. NCBI_GenBank
Match: XP_008873725.1 (hypothetical protein H310_09433 [Aphanomyces invadans] >ETV97516.1 hypothetical protein H310_09433 [Aphanomyces invadans]) HSP 1 Score: 75.9 bits (185), Expect = 3.600e-10 Identity = 87/382 (22.77%), Postives = 155/382 (40.58%), Query Frame = 0 Query: 37 LVSLERAEHILQRVIDTVNDQGLQISSL-----YLLLQTLVGTETNPLPRSLLNVEGNFSRLNHRLDRVEKAIHVPGVAPSVPIGEVVSTNGVELNHALDVLHKKANQADVEARQHKLEEEVAEVYAW----AGARELVERLEESNRATRTQVQAMEAALGCKVDKVEMAGMEATLNRIKIYNSRMEGLEQG-----------------------------------QAQDMARVRAEVQLLQERRIAADQ----QLEVTRKALGALEEKHGAWKRETLELMKEV--DGELAQMASLSQLEGKLDARVWEREWRLACERLDSKVDLPEMAAMAERVGGVEEDVVRLGRESDQYSRFVAWFYSRGEAYEHNLNALDRTIGRLA 369 LV + AE + ++DT+ Q +I L L+LQ V + N NV + L R+D +E AI +P V + +G +V+ N E+ + L +K + A VE ++E +++ EL+ RL T++ +EA + K+DK E M+A + + R +E Q +D+ +RAE Q AA Q + + L + + H + T ++++ GE + +L+GK+ W+ + R + +K L AA V ++E V R RF+ W+++RG+AYEHN+ ++ + +L+ Sbjct: 14 LVDMRAAESTFKCLMDTLEAQANEIGQLKASVAALVLQNSVQSAWND------NVTITQATLMPRIDALEAAIKLPNVR-NATLGSIVAANYKEIVSMREKLQRKIDAAVVEDACRRVETKLSSALDTLRKDCVTLELISRLHMDQDELHTKLATVEAQIDSKMDKTEATRMDAVATTMHAFIPRCSEIEHSLQQLHEKLAASNAKCRQHDQHVSTETAHLRQLVSQQHRDVGALRAETTAGQATIEAAVQACKENISLCHNKLQTIRQAHADFAASTRSSLRQLTQTGERNFQSLRDELDGKVSRTDWDAQRREMEALVQTKTPLAVTAATKAVVDKLDEWVTRCDAHVQLSLRFIDWYFNRGDAYEHNMQVMEAQLKQLS 388
BLAST of NO22G01420 vs. NCBI_GenBank
Match: XP_009844582.1 (hypothetical protein H257_17476 [Aphanomyces astaci] >ETV65927.1 hypothetical protein H257_17476 [Aphanomyces astaci]) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 85/389 (21.85%), Postives = 157/389 (40.36%), Query Frame = 0 Query: 32 VSAHGLVSLERAEHILQRVIDTVNDQGLQISSLYLLLQTLVGTETNPLPRSLLN--VEGNFSRLNHRLDRVEKAIHVPGVAPSVPIGEVVSTNGVELNHALDVLHKKANQADVEARQHKLEEEVAEVYAWAGAR----ELVERLEESNRATRTQVQAMEAALGCKVDKVEMAGMEATLNRIKIYNSRMEGLEQGQAQ----------------------------DMARVRAEVQLLQERRIAA-----------DQQLEVTRKALGALEEKHGAWKRETLELMKEVDGELAQMASLSQLEGKLDARVWEREWRLACERLDSKVDLPEMAAMAERVGGVEEDVVR----LGRESDQYS---RFVAWFYSRGEAYEHNLNALDRTIGRLA 369 +S LV + AE QR++DT+ Q I L T+ E + ++ N + G + L R+D VE AI +P V + +G +V+ N E+ + LH+K VE ++E + + EL+ L A ++ A+E + K+DK+E+ +EA +++ + R +E+ Q +A RA++ L+ AA + + + + + H + T + E+ L A +++ +L +V +W+ L++ + E A + V +++DV + GR RF+ WF+ RGEAYE NL ++ + L+ Sbjct: 4 MSLADLVDMRAAESTFQRLLDTLEHQAKDIDE---LKTTVAALERENVIQTAWNKDLHGTLASLTPRVDAVEAAIRLPNVR-NASLGSIVAANYKEIVSMREKLHRKVEPDVVEEACRRVETNMFSAFESLRKECVNLELLSSLHMDQDALHAKMAALEGQIDSKMDKMEVTRVEAMASKLHAFIPRCSEIERSLQQLDEKLTASSATCRHHEQLAALETAQLGHRLADHRADLTTLRTDTTAAHDAMDAVIQKCQRNIHLCLSKVQVAQRSHSEFAASTRTSVHELADALE--AHAQRIQNELGLKVNSCDWQTRANELEAAL---ETKAPLQAVTSLKKDVDKWADWAGRCDSHVQLSVRFIEWFFERGEAYEANLQLMEAQLKHLS 383 The following BLAST results are available for this feature:
BLAST of NO22G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01420 ID=NO22G01420|Name=NO22G01420|organism=Nannochloropsis oceanica|type=gene|length=2116bpback to top protein sequence of NO22G01420.1 >NO22G01420.1-protein ID=NO22G01420.1-protein|Name=NO22G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=445bpback to top Synonyms
Publications
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