NO22G01170, NO22G01170 (gene) Nannochloropsis oceanica

Overview
NameNO22G01170
Unique NameNO22G01170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2996
Alignment locationchr22:348640..351635 +

Link to JBrowse

Properties
Property NameValue
DescriptionEndonuclease exonuclease phosphatase family
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:348640..351635 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003963RNA-3'-phosphate cyclase activity
GO:0004527exonuclease activity
GO:0004519endonuclease activity
GO:0003963RNA-3'-phosphate cyclase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0090305nucleic acid phosphodiester bond hydrolysis
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR009097RNA_ligase/cNuc_Pdiesterase
IPR013792RNA3'P_cycl/enolpyr_Trfase_a/b
IPR000228RNA3'_term_phos_cyc
IPR017770RNA3'_term_phos_cyc_type_1
IPR023797RNA3'_phos_cyclase_dom
Homology
BLAST of NO22G01170 vs. NCBI_GenBank
Match: EWM21499.1 (endonuclease exonuclease phosphatase family [Nannochloropsis gaditana])

HSP 1 Score: 462.6 bits (1189), Expect = 2.400e-126
Identity = 297/716 (41.48%), Postives = 391/716 (54.61%), Query Frame = 0
Query:   54 RMSFSSTAAAGASSPPFSGRKVHQSALALLPDPATPLYSSIQATRQAHDKHFRRWPPHINILYPFVPESEFEVVAQVLHQALASFTPIEDDCIMARVGYFEHYKSSCTAWLAPQTPEAAAVSNITNVGRKDFRPTPHPGIIELQATCQSAVPHCSDLSSSFGGQFTPHLSLGQFRTKGDVQKFIDSLNWEAQSFPVRNLFLLSREGPHDTFCVRFIVPLGGLGEIIKVD---RPAFASLSVPPSTFKEGKNSTMKKNTGIPVTTIATHSLSPPDAEVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTAMSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLLARIGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRILAFVAGIVNAGGEAQAQILDGLQATLAMAVGEVFGQSLPLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGI----------EKAEQRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDGTVVIEVAEGRAFT 757
            +MS  STA    S   FSGRKVHQSALAL+PD  + L+++IQ+ R++HDKH+RRWPPH+NI+YPFVPE EF+V A+VL +AL+SF  I DDC MAR+GYFEH +SSCTAWLAPQ  EA           +   P PHP II+LQA CQ+A+PHC+DL++SFGG+FTPHLS+GQF+ +   + FIDS++W A+ FPVR L+LL+R GP D F VR+IV L G G + +V+    P  A  +V    F   + S   KN   P        ++P + EVDGSLLEGGGQ+LR S+AL+ LL K LRI SIR+GR+KPGLQPQHLAGV L AEI +S ++   +GS +                                                                                                                                   R+LAF  GIV AG  A  ++++GL   L   + EVFG  + +++ DNVW Q  P + ++        XXXXXXXXXXX               V H+LLVLE+++GCRLGAD+LL+DLR+F N   G  +G           ++ EQR  C  LASTL    +AGACVDEH LDQ+++YMALA+GTSRV GPPR  ++S H+ TAI + ++LLGV+F     +   G + +E+A+G AFT
Sbjct:   75 KMSAMSTADENLSD-FFSGRKVHQSALALMPDMDSSLFTAIQSIRRSHDKHYRRWPPHVNIIYPFVPEYEFDVAARVLQKALSSFAVI-DDCTMARMGYFEHGRSSCTAWLAPQ--EARLSDAELRHEEELASPAPHPRIIQLQAACQAAIPHCADLTASFGGRFTPHLSIGQFQDRKGAKDFIDSVDWVAEVFPVRQLYLLARNGPTDPFSVRYIVRLAG-GSVTRVEPGTLPRHAGATVADQGF--FRLSAGTKNATPPA------RINPAEVEVDGSLLEGGGQVLRTSLALSILLRKRLRISSIRSGRSKPGLQPQHLAGVRLVAEIGRSSVEGANLGSME-----------------------------------------------------------------------------------------------------------------------------------RVLAFATGIVTAGSGADKRLVEGLGDVLGNVLEEVFGGQIAIEYRDNVWRQ-EPFSGRE--------XXXXXXXXXXXGFATRKRARGRLKREVFHLLLVLESTSGCRLGADMLLEDLRQFQNHTNGKPDGSGDHNGDRHFEKEGEQRRVCSELASTLRKCQAAGACVDEHTLDQLVMYMALAQGTSRVLGPPRSFLSSNHVATAIRITEQLLGVSF-KMWSDKSYGPLTVEIAQGHAFT 636          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: XP_005856273.1 (endonuclease exonuclease phosphatase family, partial [Nannochloropsis gaditana CCMP526] >EKU20089.1 endonuclease exonuclease phosphatase family, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 334.7 bits (857), Expect = 7.400e-88
Identity = 178/327 (54.43%), Postives = 231/327 (70.64%), Query Frame = 0
Query:   48 ITSTFLRMSFSSTAAA-GASSPPFSGRKVHQSALALLPDPATPLYSSIQATRQAHDKHFRRWPPHINILYPFVPESEFEVVAQVLHQALASFTPIEDDCIMARVGYFEHYKSSCTAWLAPQTPEAAAVSNITNVGRKDFRPTPHPGIIELQATCQSAVPHCSDLSSSFGGQFTPHLSLGQFRTKGDVQKFIDSLNWEAQSFPVRNLFLLSREGPHDTFCVRFIVPLGGLGEIIKVD---RPAFASLSVPPSTFKEGKNSTMKKNTGIPVTTIATHSLSPPDAEVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQ 371
            + ST  R + S+ + A G  S  FSGRKVHQSALAL+PD  + L+++IQ+ R++HDKH+RRWPPH+NI+YPFVPE EF+V A+VL +AL+SF  I DDC MAR+GYFEH +SSCTAWLAPQ  EA           +   P PHP II+LQA CQ+A+PHC+DL++SFGG+FTPHLS+GQF+ +   + FIDS++W A++FPVR L+LL+R GP D F VR+IV L G G + +V+    P  A  +V    F   + S   KN   P        ++P + EVDGSLLEGGGQ+LR S+AL+ LL K LRI SIR+GR+KPGLQPQ
Sbjct:   32 LASTTSRGTMSAMSTADGNLSDFFSGRKVHQSALALMPDMDSSLFTAIQSIRRSHDKHYRRWPPHVNIIYPFVPEYEFDVAARVLQKALSSFAVI-DDCTMARMGYFEHGRSSCTAWLAPQ--EARLSDAELRHEEELASPAPHPRIIQLQAACQAAIPHCADLTASFGGRFTPHLSIGQFQDRKGAKDFIDSVDWVAEAFPVRQLYLLARNGPTDPFSVRYIVRLAG-GSVTRVEPGTLPRHAGATVADQGF--FRLSADTKNATPPA------RINPAEVEVDGSLLEGGGQVLRTSLALSILLRKRLRISSIRSGRSKPGLQPQ 346          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: XP_005856271.1 (rna 3 -terminal phosphate cyclase, partial [Nannochloropsis gaditana CCMP526] >EKU20087.1 rna 3 -terminal phosphate cyclase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 189.5 bits (480), Expect = 3.800e-44
Identity = 102/181 (56.35%), Postives = 132/181 (72.93%), Query Frame = 0
Query:  367 LQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTAM--SSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPP------IKLTLRGGTTVSHSPSIDYFIHITAPLLARIGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRILAFVAGIVNAG 540
            +QPQHLAGV L AEI +S ++   +GS ++ ++PP   ++  S  P+  F+A PGTAGSVTLLLQA+LPLLAF +    +A P P      + LTL+GGTTVSHSPSIDYF+H+TAP+LAR+GL   T ++ RGFFPQGGGQ++V+V+     SPL PL LTDPG+P R+LAF  GIV AG
Sbjct:    1 MQPQHLAGVRLVAEIGRSSVEGANLGSMEVCVHPPLSPSLDASPSPQRHFKADPGTAGSVTLLLQAALPLLAFQAP-AQSARPGPRPGAEGVTLTLKGGTTVSHSPSIDYFVHVTAPVLARMGLVVETEVLSRGFFPQGGGQVQVHVS--HPLSPLRPLNLTDPGRPQRVLAFATGIVTAG 178          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: XP_007364533.1 (RNA 3'-terminal phosphate cyclase [Dichomitus squalens LYAD-421 SS1] >EJF62460.1 RNA 3'-terminal phosphate cyclase [Dichomitus squalens LYAD-421 SS1])

HSP 1 Score: 189.1 bits (479), Expect = 5.000e-44
Identity = 147/431 (34.11%), Postives = 209/431 (48.49%), Query Frame = 0
Query:  326 EVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPP-APTAMSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLLAR-IGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRIL--AFVAGIVNAGGEAQAQILDGLQATLAMAVGEVFGQSLPLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGIEKAE-QRHFCHTLASTLHGYHSAGACVDEH-----ALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDGTVV 747
            E+DGS LEGGGQ+LR++V L+ LL K + I++IRA RN PGL+ QH AG+ L A+I  +RL+    GS  ++++P  AP A       ++ A PGTAGS+ LLLQ SLP L F S     +S  P  LTLRGGT  SHSP IDY  +I  P + +  GL+    +++RG++P+GGGQ+ V++ P     PL  + LTD G+  R+   ++VAG+  +  +A             +    +  +SL  K  D V +                                              ++L  ET  GC LG   L             G +G + A   R     LAS L      G CVDE+       DQ++I++ALA+G SRV+  P  +    H  T I V+++L    F   +EE E G VV
Sbjct:    8 EIDGSTLEGGGQLLRIAVGLSALLSKPITINNIRAKRNPPGLKFQHAAGLRLVADICSARLEGNTTGSRTITLHPQVAPQA-----SLAYTADPGTAGSIALLLQVSLPCLIFSS-----SSTSPSSLTLRGGTNASHSPQIDYTQNIFLPFIQKHFGLEPTIQVVKRGYYPRGGGQVHVSIPP--VAGPLPSVTLTDRGEIKRVYGKSYVAGLPKSLADAMRTAAIDTLVESGIKENRIKIESLREKPSDAVGSGSG-------------------------------------------IVLWAETYEGCILGGSAL-------------GRKGTDAAHVGREAARELASNL----DHGGCVDEYMQARRRSDQMIIFLALAQGKSRVKTGPLTL----HTRTVIWVVEQLSAAKF--RLEEAEGGAVV 360          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: PAA92208.1 (hypothetical protein BOX15_Mlig018990g3 [Macrostomum lignano])

HSP 1 Score: 189.1 bits (479), Expect = 5.000e-44
Identity = 137/422 (32.46%), Postives = 207/422 (49.05%), Query Frame = 0
Query:  326 EVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTA--MSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLL-ARIGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRILAFVAGIVNAGGEAQAQILDGLQATLAMAVGEVFGQSL-PLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGIEKAEQRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDG 744
            E+DGS+LEGGGQILR ++ALA+LL + ++I  IRAGR+KPGL+ QH AG+ L  +I ++    C   S  ++  PP   A  +S++    +    GTAGSV LL+QA+LP+LAF        +  P  L+LRGGT V  +P  ++F    APLL + +GL+   S+ RRGF+P+GGGQ+ + VTP    +PL P+ L DPGQ  R    V G+ +A G   A++   + +     +    G +  P  F  ++    +  +                                        + L   +STGC LGA+ +             G  G+   +         + L      G C+D H  DQ++I+MALA+G S +R  P  +    H  TA+HV + L GV F+ + +  + G
Sbjct:    9 EIDGSVLEGGGQILRNAIALASLLGRPVQICRIRAGRDKPGLKAQHNAGIQLLLQIVKADCCGCQRDSQTVTFRPPPAGAGSVSAIAGGDYSEDIGTAGSVCLLVQAALPVLAF--------ADSPSLLSLRGGTNVDFAPPAEHFTGTLAPLLESTLGLRFRLSLARRGFYPRGGGQLALEVTPAPRGAPLAPIRLLDPGQLVR----VTGVAHACGAIPARVAQQMASAARQLLLTALGSNTDPTAFSVDIVVDKSSQSVGNGCG----------------------------------ISLTAHSSTGCLLGANAI-------------GRRGVPAHD---VAAEAVNQLLADVKRGVCIDVHTQDQLVIFMALAEGESAIRVGPLTL----HTRTAVHVAEMLTGVKFSVSEDTTKPG 364          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: XP_013790831.1 (RNA 3'-terminal phosphate cyclase-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 187.6 bits (475), Expect = 1.500e-43
Identity = 134/422 (31.75%), Postives = 202/422 (47.87%), Query Frame = 0
Query:  327 VDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTAMSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLLARIGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRI--LAFVAGIVNAGGEAQAQILDGLQATLAMAVGEVFGQSLPLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGIEKAEQRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDGTVV 747
            +DG ++EGGGQILR+++A +TLL K +R+ +IRAGR+ PGL+PQHL G+ L  ++   RL+   IGSTD+S YP        +    F A  GTAGSV LL Q + P L F           P +L+LRGGT    +P IDY + +  P+L + G++   +I+RRG++P+GGG++ V  +P    S L P+ +   GQ T     +FVAG++    +    + D     L  A        +PLK +     +    +E                                       ++++ ETSTGC LG   L          +G   E + +A  +     L        + G CVD H  DQ++I+MALAKG SR++  P     + H  TAI+V+Q L    F    +E  +  ++
Sbjct:   11 IDGGVMEGGGQILRMAMAFSTLLRKPIRVTNIRAGRSNPGLRPQHLTGLQLVRDLCGGRLKGGEIGSTDISFYP------GPVKSGEFVANTGTAGSVMLLFQVAFPCLLF--------GGGPSRLSLRGGTNAEMAPQIDYTLMVFKPILEKFGVKFDCNIVRRGYYPKGGGEVVVKTSP--VASFLQPVDIVTAGQVTHFSGRSFVAGVLPI--KVAHAMADSASRVLRQAY-----PGVPLKID-----RIKEPSEVAVGNGSG-------------------------------IVIMAETSTGCLLGGSAL--------GRKGESAEKVGEAAAKELLDDL--------NCGGCVDHHLQDQLIIFMALAKGESRIKTGP----VTLHTETAIYVVQLLTEAKFNLVKDEVHNSCII 353          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: PAA59808.1 (hypothetical protein BOX15_Mlig018990g2 [Macrostomum lignano])

HSP 1 Score: 187.2 bits (474), Expect = 1.900e-43
Identity = 137/422 (32.46%), Postives = 208/422 (49.29%), Query Frame = 0
Query:  326 EVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTA--MSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLL-ARIGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRILAFVAGIVNAGGEAQAQILDGLQATLAMAVGEVFGQSL-PLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGIEKAEQRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDG 744
            E+DGS+LEGGGQILR ++AL++LL + ++I  IRAGR+KPGL+ QH AG+ L  +I ++    C   S  ++  PP   A  +S++   ++    GTAGSV LL+QA+LP+LAF        +  P  L+LRGGT V  +P  ++F    APLL + +GL+   S+ RRGF+P+GGGQ+ + VTP    +PL P+ L DPGQ  R    V G+ +A G   A++   + +     +    G +  P  F  ++    +  +                                        + L   +STGC LGA+ +             G  G+   +         + L      G CVD H  DQ++I+MALA+G S +R  P  +    H  TA+HV + L GV F+ + +  + G
Sbjct:    9 EIDGSVLEGGGQILRNAIALSSLLGRPVQICRIRAGRDKPGLKAQHNAGIQLLQQIVKADCCGCQRDSQTVTFRPPPAGAGSVSAIAGGNYSEDIGTAGSVCLLVQAALPVLAF--------ADSPSLLSLRGGTNVDFAPPAEHFTGTLAPLLESTLGLRFRLSLARRGFYPRGGGQLALEVTPAPRGAPLAPIRLLDPGQLVR----VTGVAHACGAIPARVAQQMASAARQLLLTALGSNTDPTAFFVDIVVDKSSQSVGNGCG----------------------------------ISLTAHSSTGCLLGANAI-------------GRRGVPAHD---VAAEAVNQLLADVKRGVCVDVHTQDQLVIFMALAEGESAIRVGPLTL----HTRTAVHVAEMLTGVNFSVSEDTTKPG 364          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: PAA59812.1 (hypothetical protein BOX15_Mlig018990g1 [Macrostomum lignano])

HSP 1 Score: 186.8 bits (473), Expect = 2.500e-43
Identity = 137/422 (32.46%), Postives = 208/422 (49.29%), Query Frame = 0
Query:  326 EVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTA--MSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLL-ARIGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRILAFVAGIVNAGGEAQAQILDGLQATLAMAVGEVFGQSL-PLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGIEKAEQRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDG 744
            E+DGS+LEGGGQILR ++AL++LL + ++I  IRAGR+KPGL+ QH AG+ L  +I ++    C   S  ++  PP   A  +S++   ++    GTAGSV LL+QA+LP+LAF        +  P  L+LRGGT V  +P  ++F    APLL + +GL+   S+ RRGF+P+GGGQ+ + VTP    +PL P+ L DPGQ  R    V G+ +A G   A++   + +     +    G +  P  F  ++    +  +                                        + L   +STGC LGA+ +             G  G+   +         + L      G CVD H  DQ++I+MALA+G S +R  P  +    H  TA+HV + L GV F+ + +  + G
Sbjct:    9 EIDGSVLEGGGQILRNAIALSSLLGRPVQICRIRAGRDKPGLKAQHNAGIQLLQQIVKADCCGCQRDSQTVTFRPPPAGAGSVSAIAGGNYSEDIGTAGSVCLLVQAALPVLAF--------ADSPSLLSLRGGTNVDFAPPAEHFTGTLAPLLESTLGLRFRLSLARRGFYPRGGGQLALEVTPAPRGAPLAPIRLLDPGQLVR----VTGVAHACGAIPARVAQQMASAARQLLLTALGSNTDPTAFFVDIVVDKSSQSVGNGCG----------------------------------ISLTAHSSTGCLLGANAI-------------GRRGVPAHD---VAAEAVNQLLADVKRGVCVDVHTQDQLVIFMALAEGESAIRVGPLTL----HTRTAVHVAKMLTGVNFSVSEDTTKPG 364          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: OSD02787.1 (RNA 3'-terminal phosphate cyclase [Trametes coccinea BRFM310])

HSP 1 Score: 185.3 bits (469), Expect = 7.300e-43
Identity = 142/440 (32.27%), Postives = 209/440 (47.50%), Query Frame = 0
Query:  321 SPPDAEVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTAMSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLLAR-IGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRIL--AFVAGIVNAGGEAQAQILDGLQATLAMAVGEVFGQSLPLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGIEKAE-QRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDGTVVIEVAEGRAFT 757
            +P    +DGS+LEGGGQ+LR++VAL+ LL K + I +IRA R  PGL+ QH AG+ LAAEI  +RL  C  GS  +      PT    L RC + A PGTAGS+ LLLQ SLP L     F P  S PP  L LRGGT  + +P IDY  H+  P + + +G+Q   S+++RG++P+GGG++ V+V P R   PL  + LT+ G    +   ++ AG+  +  E+       +     +    +   ++  K  D V +                                              ++L  ET  GC +    L             G +G E A+  R     LA+ L    + G CVDE+  DQ++I++ALA G S+V+  P  +    H  TAI V ++L    F +  EE  +  ++    EG  +T
Sbjct:    3 APEPIRLDGSVLEGGGQLLRIAVALSALLSKPIAIDNIRANREPPGLKQQHAAGLRLAAEICSARLDGCDTGSCSIVF---CPTTKPQLSRC-YTADPGTAGSIALLLQVSLPCL----IFSPNPSAPPSGLILRGGTNATQAPQIDYTEHVFLPFVRKHLGVQPTLSVVKRGYYPKGGGEVHVSVPPAR--GPLPAITLTERGPVKAVFGRSYAAGLPKSLAESMRAAATKVLVESGLDPDMIKIDTVREKPADAVGSGSG-------------------------------------------IVLWAETEGGCIIAGSAL-------------GRKGTEPAKVGRDAARELAANL----AHGGCVDEYMQDQMIIFLALAAGRSKVKTGPLTL----HTRTAIWVAEQLTEAKFRA--EESAESAII--ECEGIGYT 364          
BLAST of NO22G01170 vs. NCBI_GenBank
Match: XP_317988.3 (AGAP004820-PA [Anopheles gambiae str. PEST] >EAA13248.3 AGAP004820-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 184.5 bits (467), Expect = 1.200e-42
Identity = 147/430 (34.19%), Postives = 202/430 (46.98%), Query Frame = 0
Query:  326 EVDGSLLEGGGQILRVSVALATLLHKSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYPPAPTAMSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPIKLTLRGGTTVSHSPSIDYFIHITAPLLARIGLQTHTSIIRRGFFPQGGGQIEVNVTPRRSTSPLTPLVLTDPGQPTRIL--AFVAG-----IVNAGGEAQAQILDGLQATLAMAVGEVFGQSLPLKFEDNVWTQCAPHTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHVLLVLETSTGCRLGADVLLDDLRRFNNARGGGHEGIEKAEQRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAKGTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDGTVVIE 749
            E+DGS+LEGGGQILR+++  + L    +RI +IR GR KPGL  QHLAGV L  +I Q RL    +GST++  YP        +    F     TAGS+TLLLQA+LP+  F        S  P+ L LRGGT    +P +D+   I  P + R G      +IRRG+FP+GGGQ  + V P +S   L P+ + D G  TR    ++VAG     I +        IL+  Q   + A  EV+ +S+ +  E N    C+                                           +++  ETSTG  LG   L         AR  G +  E+A      H + S +    S GACVD H  D ++I MALA GTSR+R  P  M    H  TAI+V + +    F   + EG +G+ +IE
Sbjct:    8 EIDGSVLEGGGQILRMALCFSVLTKTPVRIRNIRQGRKKPGLAAQHLAGVELMRDICQGRLYKACLGSTEIEFYP------GHIEHGRFVGHIQTAGSITLLLQATLPVAIF--------SSGPVTLDLRGGTNTDLAPQVDFLTEIFRPNMERFGASFDFDLIRRGYFPKGGGQCVIEVRPVQS---LRPVTMVDVGSVTRFFGWSYVAGVLPLKIAHEMSSGAKSILN--QIANSRADIEVYKESMDMAPEGN----CS------------------------------------------GIIIGCETSTGAILGGSAL-------GEARKKGFQSGEEA-----AHEIQSAI----SVGACVDRHVQDMMIILMALADGTSRIRTEPLTM----HTKTAIYVTELMTKAKFN--IIEG-NGSAIIE 349          
The following BLAST results are available for this feature:
BLAST of NO22G01170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21499.12.400e-12641.48endonuclease exonuclease phosphatase family [Nanno... [more]
XP_005856273.17.400e-8854.43endonuclease exonuclease phosphatase family, parti... [more]
XP_005856271.13.800e-4456.35rna 3 -terminal phosphate cyclase, partial [Nannoc... [more]
XP_007364533.15.000e-4434.11RNA 3'-terminal phosphate cyclase [Dichomitus squa... [more]
PAA92208.15.000e-4432.46hypothetical protein BOX15_Mlig018990g3 [Macrostom... [more]
XP_013790831.11.500e-4331.75RNA 3'-terminal phosphate cyclase-like isoform X1 ... [more]
PAA59808.11.900e-4332.46hypothetical protein BOX15_Mlig018990g2 [Macrostom... [more]
PAA59812.12.500e-4332.46hypothetical protein BOX15_Mlig018990g1 [Macrostom... [more]
OSD02787.17.300e-4332.27RNA 3'-terminal phosphate cyclase [Trametes coccin... [more]
XP_317988.31.200e-4234.19AGAP004820-PA [Anopheles gambiae str. PEST] >EAA13... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004145NSK004145Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01170.1NO22G01170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557554gene_7119Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g36gene8958Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01170.1NO22G01170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01170 ID=NO22G01170|Name=NO22G01170|organism=Nannochloropsis oceanica|type=gene|length=2996bp
CAGGACCTGTCTTTTGGAGAGGCAGCCCGGCCCATATCGATGCGACGTCC
CGACGGCATCTTGACAGGAAGGAGCAGGGGCCTAAACACGGTTTTTGTTT
TGCCTTCACGCTGACCTCCTCTTTTATCCCCCTCACCCTTCTCCTCCTGG
CCCTGTGTGGGTCGTCCGGGCACTTTGCCTGATCGAAAAACCTGTCAAAG
TCGCTGGTAAAACTCGGACAAGAAATAAGGGATGAATATGCAACATTTTA
TTGTTGGAAGGCTTCCCCTCGTATGCCCCTCGTATGCAAGTCCTATAGGA
CGCGGGTTGCATGCGATAGTTCTAGAGGGATGTAGGAACGAACGCGATAG
TTCTAGAGGGATGTAGGAACGGGAAAAAGAACTAAAGACGGGATTTTCAA
AGCCCAAAGCCCCCCTCTCCCTCAGACTCCGCTCCCTCTTTCCCCTCCAA
GTCGCAGTCCCTTCCCAAAAACCTCCTCATTACCACCGCAGCACCAAAAG
ATCAAGCACACACAACTCATGATGCCCACTTATCTTGACGTTACACAGTG
AGACCGAATCACCATCAGCCTCCTGCATGCTTCAGCGGGAAGGAAGCAAA
ACTAGGAAGCGTAGCGGCCGAAGCAGCAGCACTACCATCACGGCCGCCCT
CCATACGACCTTGGCCCTTACTTGTAGCGGCTTTCACCGTCGACCCTTCA
TCCAAGGCCGCCCCATTATAACCAGCACATTTTTGCGCATGTCCTTTTCA
TCAACCGCGGCGGCCGGAGCTTCATCTCCTCCGTTCTCGGGACGCAAGGT
TCATCAATCAGCTCTTGCTCTCCTTCCCGATCCTGCCACACCGCTCTACT
CCTCTATCCAGGCGACGCGACAGGCGCACGATAAACACTTCAGACGCTGG
CCTCCACACATAAACATTCTTTACCCTTTTGTACCCGAATCTGAGTTCGA
GGTAGTGGCGCAGGTCTTGCACCAGGCTCTGGCTTCCTTCACCCCTATTG
AGGACGACTGCATTATGGCCCGTGTTGGGTACTTTGAGCACTACAAATCC
TCTTGTACGGCCTGGCTGGCCCCACAGACACCAGAGGCAGCCGCAGTATC
AAACATCACAAATGTGGGCAGGAAAGACTTCCGCCCAACGCCCCACCCAG
GCATTATTGAGCTGCAAGCAACGTGCCAGTCGGCGGTCCCACATTGCAGC
GATCTCTCTTCTTCCTTTGGAGGACAATTCACGCCACATCTCTCCCTCGG
TCAGTTCCGTACTAAGGGAGACGTTCAAAAGTTCATTGACTCGCTGAATT
GGGAGGCGCAATCCTTTCCAGTTCGTAACCTCTTTCTTCTATCGAGAGAA
GGGCCGCATGACACTTTCTGTGTCCGGTTTATCGTGCCCTTGGGTGGCCT
CGGCGAAATCATCAAAGTAGACCGTCCTGCTTTTGCTTCTCTTTCTGTGC
CTCCTTCCACTTTTAAAGAAGGAAAAAATAGCACTATGAAGAAGAATACT
GGCATCCCTGTGACGACGATCGCGACGCATTCTCTTTCTCCGCCAGACGC
TGAGGTCGACGGAAGCTTGCTTGAAGGCGGGGGGCAGATCTTGCGTGTCT
CCGTAGCTCTTGCAACACTACTCCACAAATCTCTACGTATCCATTCCATT
CGAGCAGGCCGAAACAAACCAGGCCTCCAGCCACAGCACTTGGCGGGAGT
CTTGCTGGCTGCGGAGATAAGTCAATCGCGTCTCCAACATTGTGTCATTG
GCAGCACGGACATGAGTATCTACCCCCCGGCCCCTACTGCAATGTCCAGT
CTACCGCGGTGTAGTTTCGAAGCGGGCCCAGGAACGGCAGGCAGTGTGAC
GTTGCTCTTACAAGCATCACTACCTCTCCTCGCCTTTTACTCGACCTTTC
TCCCCACTGCCTCGCCTCCCCCTATCAAACTGACTCTTCGAGGAGGTACC
ACCGTCTCTCACTCTCCCTCCATTGACTACTTCATTCACATCACCGCCCC
CCTCCTCGCTCGCATTGGCCTGCAAACACATACCAGTATTATTCGCCGAG
GATTTTTCCCTCAGGGGGGAGGTCAGATCGAAGTGAACGTCACACCGCGT
CGGTCCACCTCTCCTCTGACACCACTTGTCCTCACTGATCCCGGACAACC
GACACGCATCCTTGCTTTCGTCGCTGGGATTGTCAACGCGGGAGGTGAAG
CTCAAGCACAGATATTGGACGGATTGCAAGCCACTCTGGCTATGGCGGTG
GGAGAGGTTTTTGGGCAATCCTTGCCTTTGAAGTTCGAAGATAATGTGTG
GACGCAATGTGCTCCTCACACAGAGCAGCAAAGTCACGGTCGAGGAGGAG
GAGGAGGGGGAGAAGGAGAAGAAAGAGGAGCGGGATGGGGTACGGGATCG
AACAAACGTGCCCGCACGAGGCCGAAAAGGGAGGTGGTGCACGTGCTATT
GGTACTGGAAACGAGCACGGGTTGTCGCTTAGGCGCCGACGTCTTGCTGG
ACGACTTACGGCGCTTCAACAATGCCAGAGGTGGTGGGCATGAGGGTATT
GAGAAGGCTGAGCAACGACATTTCTGTCACACTCTTGCCAGCACCCTTCA
CGGATACCATAGTGCGGGAGCGTGCGTAGATGAGCACGCACTGGATCAGA
TTTTGATATACATGGCCTTGGCCAAGGGAACTTCTCGCGTGCGTGGACCT
CCCCGTGTAATGATGACTTCGAAGCATATGCCAACAGCCATTCATGTCAT
ACAGAAACTCCTGGGTGTTGCTTTTACTAGCGCGATGGAGGAAGGGGAGG
ACGGCACGGTAGTCATCGAGGTGGCAGAAGGACGGGCTTTCACCGGAGCA
GGGGATGTTGAGGCCGTATCGTAATATAAATCCGTCCATTCGAGAACGGT
GGCTTGAGTCTTTTCCGATGGTGGATGAAGAGGGGATACAGGGGGTGGGA
AGATTGACAGATTGACACCTCATTTTTGATGTGAGACAAAGATCGA
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protein sequence of NO22G01170.1

>NO22G01170.1-protein ID=NO22G01170.1-protein|Name=NO22G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=766bp
MLQREGSKTRKRSGRSSSTTITAALHTTLALTCSGFHRRPFIQGRPIITS
TFLRMSFSSTAAAGASSPPFSGRKVHQSALALLPDPATPLYSSIQATRQA
HDKHFRRWPPHINILYPFVPESEFEVVAQVLHQALASFTPIEDDCIMARV
GYFEHYKSSCTAWLAPQTPEAAAVSNITNVGRKDFRPTPHPGIIELQATC
QSAVPHCSDLSSSFGGQFTPHLSLGQFRTKGDVQKFIDSLNWEAQSFPVR
NLFLLSREGPHDTFCVRFIVPLGGLGEIIKVDRPAFASLSVPPSTFKEGK
NSTMKKNTGIPVTTIATHSLSPPDAEVDGSLLEGGGQILRVSVALATLLH
KSLRIHSIRAGRNKPGLQPQHLAGVLLAAEISQSRLQHCVIGSTDMSIYP
PAPTAMSSLPRCSFEAGPGTAGSVTLLLQASLPLLAFYSTFLPTASPPPI
KLTLRGGTTVSHSPSIDYFIHITAPLLARIGLQTHTSIIRRGFFPQGGGQ
IEVNVTPRRSTSPLTPLVLTDPGQPTRILAFVAGIVNAGGEAQAQILDGL
QATLAMAVGEVFGQSLPLKFEDNVWTQCAPHTEQQSHGRGGGGGGEGEER
GAGWGTGSNKRARTRPKREVVHVLLVLETSTGCRLGADVLLDDLRRFNNA
RGGGHEGIEKAEQRHFCHTLASTLHGYHSAGACVDEHALDQILIYMALAK
GTSRVRGPPRVMMTSKHMPTAIHVIQKLLGVAFTSAMEEGEDGTVVIEVA
EGRAFTGAGDVEAVS*
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Synonyms
Publications