NO22G01160, NO22G01160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01160 vs. NCBI_GenBank
Match: EWM21501.1 (abc transporter family protein [Nannochloropsis gaditana]) HSP 1 Score: 433.7 bits (1114), Expect = 3.600e-118 Identity = 207/231 (89.61%), Postives = 221/231 (95.67%), Query Frame = 0 Query: 1 MHAFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARSTLSGGGYAAGRMYDVFHE 232 MHAFRDTKLNL+RAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPF+ILLLDEVTVSLDVVVRQDLLRWLR+ETE RGATV+YATHIFDGLDDWPSHLHFMTNQG+TGWQGKLE+LDHY+ELR+AGDPGPLLRIAERWLRTE + QKR+K +EKELG Q D KL++ TLSGGG+AAGRMYD FHE Sbjct: 87 MHAFRDTKLNLIRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFEILLLDEVTVSLDVVVRQDLLRWLRRETEVRGATVIYATHIFDGLDDWPSHLHFMTNQGRTGWQGKLEDLDHYRELRRAGDPGPLLRIAERWLRTETEEQKRRKLREKELGTQVLDDKLSQPTLSGGGFAAGRMYDHFHE 317
BLAST of NO22G01160 vs. NCBI_GenBank
Match: XP_002177582.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50396.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 289.3 bits (739), Expect = 1.100e-74 Identity = 136/225 (60.44%), Postives = 175/225 (77.78%), Query Frame = 0 Query: 1 MHAFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARSTLSGGGYAAGRM 226 ++AF DT+LN RAY+D DWGMR VAF G VPL ADIPV MM KLQ+ +PERRDELL++LGID +WRM+++SDGQRRRVQ+FLGLVRPF ILLLDE+T SLDV VRQDLLRWL +E++ RGAT++YATHIFDGLD+W +HL+++ N+G+ GWQGK+++LD YQ+L+ P +L IAE WLR EI+ K ++EK GA AH T + GG+ +GR+ Sbjct: 103 LNAFHDTRLNFHRAYLDCDWGMRNVAFVGAAVPLMADIPVRNMMQKLQASYPERRDELLDMLGIDLDWRMHQLSDGQRRRVQIFLGLVRPFQILLLDEITTSLDVCVRQDLLRWLVRESDNRGATIIYATHIFDGLDEWATHLYYLNNRGQCGWQGKMQDLDVYQKLKAEAHPCKMLAIAEHWLRQEINEAKANNQKEKAQGALAHQLD---PTDNQGGFGSGRL 324
BLAST of NO22G01160 vs. NCBI_GenBank
Match: XP_002291847.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90698.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 288.1 bits (736), Expect = 2.400e-74 Identity = 137/227 (60.35%), Postives = 175/227 (77.09%), Query Frame = 0 Query: 1 MHAFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARSTLSGGGYAAGRMYD 228 +++FRDT+LN RAY++T WG++TVAFAG GVPL ADIPV MM KLQ+ +PERRDEL+E+LGIDP WRM+ +SDGQRRRVQL + LVRPF ILLLDEVTVSLDV VRQDLL+WL KE+ ERGAT++YATHIFDGLDDW +HL+++ N G GWQG++++L+ Y L+ A P +L IA+ WLR E++ ++ +R EK G A+ L T GGYA+GR D Sbjct: 92 LNSFRDTRLNFHRAYLETGWGLQTVAFAGCGVPLMADIPVFKMMEKLQNAYPERRDELIEMLGIDPNWRMHMLSDGQRRRVQLLIQLVRPFTILLLDEVTVSLDVCVRQDLLKWLEKESVERGATIIYATHIFDGLDDWATHLYYLNNNGSCGWQGEMKDLELYHTLKAANHPCKMLAIADNWLRKELEDNRKNRRLEKAQGEMAYQ-DLVDVTDRNGGYASGRNID 317
BLAST of NO22G01160 vs. NCBI_GenBank
Match: GAX09382.1 (CCR4-NOT complex subunit CAF16 [Fistulifera solaris]) HSP 1 Score: 286.2 bits (731), Expect = 9.200e-74 Identity = 138/226 (61.06%), Postives = 174/226 (76.99%), Query Frame = 0 Query: 1 MHAFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARST-LSGGGYAAGRM 226 +HAF DT+LN RAY+D DWGMR VAF G VPL ADIPV MM +LQ+ +PERR ELLE+L ID WRM+++SDGQRRRVQ+FLGL+RPF ILLLDE+T SLDV VRQDLLRWL +E+EERGAT++YATHIFDGLDDW SHL ++TN+G+ GWQGK+EEL+ Y +L+ P +L IA+ WLR E++ +R ++ E GA +L T +S GGYA+GR+ Sbjct: 98 LHAFHDTRLNFHRAYLDCDWGMRNVAFVGAAVPLMADIPVHKMMERLQASYPERRQELLEMLNIDINWRMHQLSDGQRRRVQIFLGLIRPFQILLLDEITTSLDVCVRQDLLRWLVRESEERGATIIYATHIFDGLDDWASHLFYLTNKGQCGWQGKMEELEVYHKLKAENHPCKMLAIADHWLRAELNENRRLQQFEPAQGAA---VRLPDPTDISQGGYASGRL 320
BLAST of NO22G01160 vs. NCBI_GenBank
Match: GAX20293.1 (CCR4-NOT complex subunit CAF16 [Fistulifera solaris]) HSP 1 Score: 285.8 bits (730), Expect = 1.200e-73 Identity = 137/226 (60.62%), Postives = 174/226 (76.99%), Query Frame = 0 Query: 1 MHAFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARST-LSGGGYAAGRM 226 +HAF DT+LN RAY+D DWGMR VAF G VPL ADIPV MM +LQ+ +PERR ELLE+L ID WRM+++SDGQRRRVQ+FLGL+RPF ILLLDE+T SLDV VRQDLLRWL +E+EERGAT++YATHIFDGLDDW SHL ++TN+G+ GWQG++EEL+ Y +L+ P +L IA+ WLR E++ +R ++ E GA +L T +S GGYA+GR+ Sbjct: 98 LHAFHDTRLNFHRAYLDCDWGMRNVAFVGAAVPLMADIPVHKMMERLQASYPERRQELLEMLNIDVNWRMHQLSDGQRRRVQIFLGLIRPFQILLLDEITTSLDVCVRQDLLRWLVRESEERGATIIYATHIFDGLDDWASHLFYLTNKGQCGWQGQMEELEVYHQLKAENHPCKMLAIADHWLRAELNENRRLRQFEPAQGAA---VRLPDPTDISQGGYASGRL 320
BLAST of NO22G01160 vs. NCBI_GenBank
Match: EJK45508.1 (hypothetical protein THAOC_35875, partial [Thalassiosira oceanica]) HSP 1 Score: 283.5 bits (724), Expect = 6.000e-73 Identity = 132/224 (58.93%), Postives = 174/224 (77.68%), Query Frame = 0 Query: 1 MHAFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARSTLSGGGYAAGR 225 ++A+RDT+LN R+Y++T WG+ TVAFAG GVPL ADIPV MM +Q+ PERRDEL+ELLGIDPEWRM+ +S+GQRRRVQL + LVRPF ILLLDEVTVSLDV VRQDLLRWL +E+ ERGAT++YATHIFDGLDDW +HL ++T++G GW G++++L++YQ L+ P +L +A+ WLR E++ +R++R EK G A+ T + GGYA+GR Sbjct: 57 LNAYRDTRLNFHRSYLETGWGLTTVAFAGCGVPLMADIPVKEMMKSVQNAFPERRDELMELLGIDPEWRMHMLSEGQRRRVQLLIQLVRPFQILLLDEVTVSLDVCVRQDLLRWLERESSERGATIVYATHIFDGLDDWATHLFYLTSEGNCGWSGEMKDLEYYQRLKAENHPSKMLAVADHWLRRELEENRRKRRFEKAQGEMAYQLD---PTDNQGGYASGR 277
BLAST of NO22G01160 vs. NCBI_GenBank
Match: OEU20138.1 (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 276.2 bits (705), Expect = 9.500e-71 Identity = 133/224 (59.38%), Postives = 173/224 (77.23%), Query Frame = 0 Query: 1 MHAFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARSTLSGGGYAAGR 225 +++FR+TKLN RAY++TDWGM ++AF G VPL ADIPV MM KLQ+ +PERRDEL+ +LGID +W M+++SDGQRRRVQ+ +GLVRPF ILLLDE+T SLDV VRQDLL+WL KE+EERGAT+LYATHIFDGLD+W S L ++TN+GK GWQG++EEL+ YQ+L++ P +L IA+ WLR E++ Q+ + + EK A D T GGYA+GR Sbjct: 81 LNSFRETKLNFHRAYLNTDWGMTSMAFVGASVPLCADIPVRKMMEKLQNSYPERRDELVRMLGIDLDWHMHQLSDGQRRRVQIMIGLVRPFKILLLDEITTSLDVCVRQDLLQWLVKESEERGATILYATHIFDGLDEWASDLFYLTNKGKCGWQGRMEELELYQQLQRDNHPAKMLAIADHWLRKELNEQRAKNQYEKAQYAVELD-----PTDRQGGYASGR 299
BLAST of NO22G01160 vs. NCBI_GenBank
Match: XP_009037103.1 (hypothetical protein AURANDRAFT_64176 [Aureococcus anophagefferens] >EGB08385.1 hypothetical protein AURANDRAFT_64176 [Aureococcus anophagefferens]) HSP 1 Score: 270.0 bits (689), Expect = 6.800e-69 Identity = 134/206 (65.05%), Postives = 156/206 (75.73%), Query Frame = 0 Query: 4 FRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAK 210 FRD KLNL RA++DT WGMRTVAFAGYG PLQADI V GMM KLQ HPERRDEL+++LG+DPEWRM+RVSDGQRRRVQL LGL VT LDV+VRQDLL WL+KE E RGATVLYATHIFDGLDDWP+H+H++ GKTGWQG++++LD Y +LRK G P PLL+IA WLR E+ + E E G A+D K Sbjct: 96 FRDLKLNLTRAFLDTQWGMRTVAFAGYGCPLQADIRVGGMMRKLQDAHPERRDELVKILGVDPEWRMHRVSDGQRRRVQLLLGL-----------VTTCLDVIVRQDLLLWLQKECEVRGATVLYATHIFDGLDDWPTHIHYLNRFGKTGWQGEMKDLDLYTKLRKEGHPSPLLKIATTWLRAEL--AEFGPATEGEDGDAANDMK 288
BLAST of NO22G01160 vs. NCBI_GenBank
Match: CBN76831.1 (ABC transporter family protein [Ectocarpus siliculosus]) HSP 1 Score: 240.7 bits (613), Expect = 4.400e-60 Identity = 118/206 (57.28%), Postives = 158/206 (76.70%), Query Frame = 0 Query: 27 FAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQ----KRQEKELG---AQAHDAKLARSTLSGGGYAAGRM 226 FAG+GVPLQADI V MM K Q ++PERR+ELL +LG+DP WRM++VSDGQRRRVQL LGLV+PF +LLLDEVT SLDVVVRQDLL WL KE+ ERGAT++YATHIFDGLD+WP+HL ++T G TGWQG+LE+L+ +++++ G+ LL++A WLR E + +++ +RQ +E G A + ++ ++GGG+A GRM Sbjct: 5 FAGHGVPLQADIAVGDMMKKDQERYPERREELLNMLGVDPNWRMHQVSDGQRRRVQLLLGLVKPFKLLLLDEVTTSLDVVVRQDLLHWLHKESVERGATIIYATHIFDGLDEWPTHLTYLTRDGSTGWQGRLEDLELNRQMKERGETCTLLKVAVHWLRGEQEEYRKETLERRRQVEESGGSDAIRNRNPNLKAYVAGGGFAPGRM 210
BLAST of NO22G01160 vs. NCBI_GenBank
Match: GAY05809.1 (putative non-intrinsic ABC protein [Pythium insidiosum]) HSP 1 Score: 212.6 bits (540), Expect = 1.300e-51 Identity = 110/227 (48.46%), Postives = 152/227 (66.96%), Query Frame = 0 Query: 3 AFRDTKLNLVRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNRVSDGQRRRVQLFLGLVRPFDILLLDEVTVSLDVVVRQDLLRWLRKETEERGATVLYATHIFDGLDDWPSHLHFMTNQGKTGWQGKLEELDHYQELRKAGDPGPLLRIAERWLRTEIDVQKRQKRQEKELGAQAHDAKLARSTLSGGGYAAGRMYDVF 230 AFRDT LN +RA++ DWG R VAFA + + ADI + MM KLQ ++PERRD LL +L IDP+WR++R+SDGQRRRVQLFL L+RP +++LDEV LD++ R+++L +L++ETE+RGATVL ATHIFDG D W SH+ ++ +G G+ G +E+ + G P+ R E WLR E++ R +R E L A + LA + GGYA+GR+ VF Sbjct: 102 AFRDTILNQLRAFVSADWGHRAVAFASHAMAYSADIAIDEMMVKLQQEYPERRDHLLRVLRIDPKWRLHRLSDGQRRRVQLFLALIRPSQLIVLDEVLGMLDIISRENVLAFLKQETEQRGATVLLATHIFDGTDVWASHVVYV-RRGTVGFHGTIEDC-----TTRTGVKVPMYRAVEMWLREELEEDDRIER-EAGLAAAGGEFDLANAQNRAGGYASGRLGGVF 321 The following BLAST results are available for this feature:
BLAST of NO22G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01160 ID=NO22G01160|Name=NO22G01160|organism=Nannochloropsis oceanica|type=gene|length=1846bpback to top protein sequence of NO22G01160.1 >NO22G01160.1-protein ID=NO22G01160.1-protein|Name=NO22G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top protein sequence of NO22G01160.2 >NO22G01160.2-protein ID=NO22G01160.2-protein|Name=NO22G01160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=320bpback to top protein sequence of NO22G01160.3 >NO22G01160.3-protein ID=NO22G01160.3-protein|Name=NO22G01160.3|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top Synonyms
Publications
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