NO22G01090, NO22G01090 (gene) Nannochloropsis oceanica

Overview
NameNO22G01090
Unique NameNO22G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2454
Alignment locationchr22:337935..340388 -

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Properties
Property NameValue
Descriptionp21-activated protein kinase-interacting protein 1-like
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:337935..340388 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO22G01090 vs. NCBI_GenBank
Match: XP_005853625.1 (hypothetical protein NGA_0430201 [Nannochloropsis gaditana CCMP526] >EKU22736.1 hypothetical protein NGA_0430201 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 463.8 bits (1192), Expect = 6.700e-127
Identity = 239/376 (63.56%), Postives = 279/376 (74.20%), Query Frame = 0
Query:    1 MPAPGPPSAATTVVNAGPPLQPPAFAPKTICVAGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTFLP---SSXXXXXXXXXXXXXXXXXXXXXQHVLTACDDLQLRIVDGASGAIISSIDVTPFCGRIKEAVLL-HGSSSSGEGGREVVTASSNGKIVIWSINAAGTVVRPGPRTSLGECVRITCLAAYAVSE 373
            MP P    AA  + ++  P+ P +   + ICVAGTYDGGI GWE+QR  Q+ T       LKM FAYTPHQGSVRSLA+P+GG KAG LLVSGG+DEHIRMYDLRKRAE GELLHHKGTITALGFVGSSHLLSGSEDG VCIWRVYDWSLLHILGGHKGA+TAVA+HPSGKLALS+GRDRSLRLWDLV+GRCAYITKLE V E+VKWS DG  Y L +GDRRLEVRR +DNKPTAI  HP+R+TA+ FLP   ++                      HV+TACDD  LR+VDG +G+++S  +  P CGRIKEAV+  + +    +  RE+VTASS+GKI++W +  AGT V  GP  +LG  VRITCLAAYA  E
Sbjct:    1 MPVPPLFPAAAAIGSSLLPIFPTS---RYICVAGTYDGGIAGWELQREGQNQT-----TGLKMIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGE 368          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: EWM21449.1 (pak1ip1 protein [Nannochloropsis gaditana])

HSP 1 Score: 426.0 bits (1094), Expect = 1.600e-115
Identity = 211/312 (67.63%), Postives = 243/312 (77.88%), Query Frame = 0
Query:   65 FAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTFLP---SSXXXXXXXXXXXXXXXXXXXXXQHVLTACDDLQLRIVDGASGAIISSIDVTPFCGRIKEAVLL-HGSSSSGEGGREVVTASSNGKIVIWSINAAGTVVRPGPRTSLGECVRITCLAAYAVSE 373
            FAYTPHQGSVRSLA+P+GG KAG LLVSGG+DEHIRMYDLRKRAE GELLHHKGTITALGFVGSSHLLSGSEDG VCIWRVYDWSLLHILGGHKGA+TAVA+HPSGKLALS+GRDRSLRLWDLV+GRCAYITKLE V E+VKWS DG  Y L +GDRRLEVRR +DNKPTAI  HP+R+TA+ FLP   ++                      HV+TACDD  LR+VDG +G+++S  +  P CGRIKEAV+  + +    +  RE+VTASS+GKI++W +  AGT V  GP  +LG  VRITCLAAYA  E
Sbjct:   40 FAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAAAAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVLSCTETGPHCGRIKEAVVWGNRALPFWQQSRELVTASSDGKILVWRVGPAGTQVEVGPGAALGAGVRITCLAAYAAGE 351          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: CBJ48726.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 219.9 bits (559), Expect = 1.700e-53
Identity = 118/313 (37.70%), Postives = 166/313 (53.04%), Query Frame = 0
Query:   32 VAGTYDGGIVGWEVQRRTQDATGPAK--------------------------------PAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTFLPSSXXXXXXXXXXXXXXXXXXXXXQHVLTACDDLQLRIVDGASGAIISSIDVTPFC--GRIKE 311
            VAGTY+G   GWE       A G                                      L + F Y  H G ++S+A+   G++AG LLV+GG DE +R+YDLR R E GEL  H GTIT + F  S+HLL+GSED  VCIWRV+DW+LLH+LGGHK AVT++++HPSG++ALS  RDR+LRLW+L++GRCAYI +L+   E VKWS  G++Y++++G   + V   A ++      H +R+ +  F                           V T  DD  +R      G ++  +DV+  C  GRI++
Sbjct:    4 VAGTYEGFCYGWESNNTESAAVGAESLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSLVFGYNVHVGCMKSVAIATSGSRAGQLLVTGGADERVRIYDLRDRTELGELQQHNGTITCMEFYKSTHLLTGSEDHTVCIWRVHDWALLHVLGGHKAAVTSLSIHPSGRMALSVSRDRTLRLWNLLEGRCAYIKRLQGEGELVKWSPAGDSYLVVVGS-TVSVYSAATSEAVGECRHDARVNSACFTGGKGGKGAVA----------------VATCADDKTIRFFRTEGGTLLGKVDVSDVCPTGRIRD 299          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: CCI46437.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 205.7 bits (522), Expect = 3.300e-49
Identity = 129/352 (36.65%), Postives = 181/352 (51.42%), Query Frame = 0
Query:   33 AGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTFLPSSXXXXXXXXXXXXXXXXXXXXXQHVLTACDDLQLRI--VDGASGAIISSIDVTPFCGRIKEAVLLHGSSSSGEGGREVVTASSNGKIVIWSIN----------AAGTVVRPGPRTSLGECVRITCLAAYAVSE 373
            AGTYDG + GW+     ++    A    LK+ F Y+ H   V+S    +  ++ G +L+SG  DE I++YD+ KR E G L+   G+IT L F   +H+LS S D  VCIWRV DW+ LHILGGHK  + ++ +HPSGKLA S  RD++LR+W+LV GRCAYI +LE  AE VK S  G+ Y+L  G   + +  T+D +    L HP R+ A  F                           V+ A +D  L +  VDG   A ++  D+T    RI+   ++    SS      +V A+SNG + IW +N               V+P   T +    RITCL A A S+
Sbjct:    6 AGTYDGILYGWDAIPMAEEKHSDATKWTLKLRFGYSAHSECVKSAVFMK--SRNGKILLSGSSDETIKIYDVDKRVEVGTLMEQSGSITCLEFFQQTHVLSASTDKTVCIWRVSDWNCLHILGGHKEEINSITIHPSGKLAFSVARDQTLRMWNLVNGRCAYIRRLEKEAEIVKISTLGKRYLLTFGS-VVSIFSTSDAELVGTLKHPKRVHACVFATDDL----------------------VVCAGEDKHLYVWNVDGTLLAKVTHPDLT---ARIRCIDVIDQEVSSDL--PIIVLATSNGTVQIWDLNDLQLDSDSPFELNESVQPSATTKILNAPRITCLTACASSQ 327          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: GAY00479.1 (p21-activated protein kinase-interacting protein, putative [Pythium insidiosum])

HSP 1 Score: 201.8 bits (512), Expect = 4.800e-48
Identity = 131/361 (36.29%), Postives = 186/361 (51.52%), Query Frame = 0
Query:   32 VAGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIR---------MYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTFLPSSXXXXXXXXXXXXXXXXXXXXXQHVLTACDDLQLRIVDGASGAIISSIDVTPFCGRIK--EAVLLHGSSSSGEGGREVVTASSNGKIVIWSI----------NAAGTVVRPGPRTSLGECVRITCLAAYAVS 372
            VAGTY+G + GWE+       T  +  A LK+TF Y+ H  S++S+A+    AK G  LVSG  DE I+         +Y+++KR E G L+  KG IT L F G SH+LSG  D  +CIWR  DW+ LHILGGHKG +T++A+HPSGKLA S  RDR+LR+W+LVKGR A+I +L+  A  V  S+ G  Y L  G+  L V  +A+ +    L HP +I A  F                          +V+   +D  +  V  A+G +++ I       RI+  + V  HG          +V A+S+G + +W +            A   V P   T+L    R+TCL+A  V+
Sbjct:    8 VAGTYEGLLYGWEL------PTKRSANAKLKLTFGYSAHAESIKSVALM--AAKQGKTLVSGASDEMIKYASAFSRHAIYNVQKRVEVGTLMEQKGAITCLEFFGQSHMLSGCADHSICIWRTSDWNCLHILGGHKGEITSIAVHPSGKLAFSVARDRTLRMWNLVKGRIAFIRRLDKEASFVLMSQTGGRYALCFGN-ELSVFSSANAEVIGTLDHPQKIHAAVFATD----------------------DYVVCGGEDKTI-YVWKAAGTLVAKISHPELTSRIRCMQVVYPHGEDKL----PWIVVATSSGTVQVWDMADWKLDPLAPEEANADVSPVVSTTLLSKPRLTCLSACLVA 332          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: CCA20016.1 (p21activated protein kinaseinteracting protein putat [Albugo laibachii Nc14])

HSP 1 Score: 200.7 bits (509), Expect = 1.100e-47
Identity = 126/348 (36.21%), Postives = 181/348 (52.01%), Query Frame = 0
Query:   33 AGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTFLPSSXXXXXXXXXXXXXXXXXXXXXQHVLTACDDLQLRI--VDGASGAIISSIDVTPFCGRIK-EAVLLHGSSSSGEGGREVVTASSNGKIVIWSIN----------AAGTVVRPGPRTSLGECVRITCLAA 368
            AGTY G + GW+       +   +K   LK+ F Y+ H   ++S A  +  ++ G +L+SG  DE I++YD  KR E G L+   G+IT L F   +HLLS S D  VCIWRV DW+ LH+LGGHK  ++A+A+HPSGKLA S  RD++LR+W+LV GRCAYI +LE  AE V+ S  G+ Y+L  G+  + +  T+D +    L HP R+ A  F                           V+ A +D  + +  VDG   A ++  D+T    RI+   V++   SS       +V A+SNG + IW +N           +    +P   T +    RITCL A
Sbjct:    6 AGTYGGILYGWDAIPVDDKSNTSSKKWQLKLRFGYSAHSECIKSAAFMK--SRNGKILLSGSSDETIKIYDADKRIEVGTLMEQSGSITCLEFFQHTHLLSASTDKTVCIWRVSDWNCLHVLGGHKEEISAIAIHPSGKLAFSVARDQTLRMWNLVNGRCAYIRRLEKEAEIVRISTLGKRYLLTFGN-VVSIFCTSDAELIGTLTHPKRMHACVFATDDL----------------------VVCAGEDRHIYVWNVDGTLLAKVTHADLT---ARIRCIDVIIENESSELP---TIVLATSNGTVQIWDLNDLQLDSEFPLESNEAAQPAATTMILNAPRITCLTA 322          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: XP_008862213.1 (hypothetical protein H310_00993 [Aphanomyces invadans] >ETW08408.1 hypothetical protein H310_00993 [Aphanomyces invadans])

HSP 1 Score: 198.0 bits (502), Expect = 6.900e-47
Identity = 97/217 (44.70%), Postives = 139/217 (64.06%), Query Frame = 0
Query:   32 VAGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTF 249
            VAGTY+G + GWE    T+D TG     ALKM + Y  H   +++LA+       G  L++GG DE I++Y+++K+ E G L+ HKG IT L + G SH+LSGS D  +CIWR  DW+ +HILGGHKGA+ ++A+HPSGKLA S  RD++LR+W+LVKGR AYI +L+  A  V  S DG  Y L++G + + +  +A+ +    L H  ++    F
Sbjct:    9 VAGTYEGMLYGWEAS--TKDLTGKKPRTALKMIYGYPAHTECIKALAMMM--EHDGKTLLTGGNDEMIKIYNVKKKVEVGILMQHKGAITCLEYYGKSHVLSGSADNTICIWRTSDWNCIHILGGHKGAINSIAVHPSGKLAFSVSRDKTLRMWNLVKGRSAYIRRLDQEATCVFLSPDGNRYGLVMG-KDVSIFGSANAELVGALEHKKKVHTAAF 220          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: XP_009822040.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV89640.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 196.4 bits (498), Expect = 2.000e-46
Identity = 95/217 (43.78%), Postives = 140/217 (64.52%), Query Frame = 0
Query:   32 VAGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTF 249
            VAGTY+G + GWE    T+D TG    +ALKM + Y  H   +++LA+       G  L++GG DE I++Y+++K+ E G L+ HKG IT L + G SH+LSGS D  +CIWR  DW+ +HILGGH+G V ++A+HPSGKLA S  +D++LR+W+LVKGR AYI +L+  A  V  S+DG  Y L++G+  + +  +A+ +    L H  ++    F
Sbjct:   12 VAGTYEGMLYGWEAS--TKDLTGKKPKSALKMVYGYPAHTECIKALAMMM--EHDGKTLLTGGNDEMIKIYNVKKKVEVGILMQHKGAITCLEYYGKSHVLSGSADNTICIWRTSDWNCIHILGGHQGPVNSIAVHPSGKLAFSVSKDKTLRMWNLVKGRSAYIRRLDQEATCVFLSQDGNRYGLVMGN-HVSIFGSANAELVGALEHKKKVHTAAF 223          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: XP_009822043.1 (hypothetical protein, variant 4 [Aphanomyces astaci] >ETV89643.1 hypothetical protein, variant 4 [Aphanomyces astaci])

HSP 1 Score: 196.4 bits (498), Expect = 2.000e-46
Identity = 95/217 (43.78%), Postives = 140/217 (64.52%), Query Frame = 0
Query:   32 VAGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTF 249
            VAGTY+G + GWE    T+D TG    +ALKM + Y  H   +++LA+       G  L++GG DE I++Y+++K+ E G L+ HKG IT L + G SH+LSGS D  +CIWR  DW+ +HILGGH+G V ++A+HPSGKLA S  +D++LR+W+LVKGR AYI +L+  A  V  S+DG  Y L++G+  + +  +A+ +    L H  ++    F
Sbjct:   12 VAGTYEGMLYGWEAS--TKDLTGKKPKSALKMVYGYPAHTECIKALAMMM--EHDGKTLLTGGNDEMIKIYNVKKKVEVGILMQHKGAITCLEYYGKSHVLSGSADNTICIWRTSDWNCIHILGGHQGPVNSIAVHPSGKLAFSVSKDKTLRMWNLVKGRSAYIRRLDQEATCVFLSQDGNRYGLVMGN-HVSIFGSANAELVGALEHKKKVHTAAF 223          
BLAST of NO22G01090 vs. NCBI_GenBank
Match: OWZ18359.1 (P21-activated protein kinase-interacting protein [Phytophthora megakarya])

HSP 1 Score: 193.4 bits (490), Expect = 1.700e-45
Identity = 100/217 (46.08%), Postives = 131/217 (60.37%), Query Frame = 0
Query:   32 VAGTYDGGIVGWEVQRRTQDATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIRMYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSLLHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEVVAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTF 249
            VAGTY+G + GWE      D     +   +K+TF Y  H   ++S+A+   GAK G  L+SGG DE I++Y++ KR E G L+   G IT+L F G SH+LSGS D  +CIWR  DW+ LHILGGHKG + ++A+HPSGKL  S  RDR+LR+W+LVKGR A+I +LE  AE V  S+ G  Y L  G         A+   T  L HP +I    F
Sbjct:    5 VAGTYEGLLYGWECPTVATD-----ESTKMKLTFGYAAHSECIKSVALM--GAKQGKTLLSGGSDEMIKIYNVDKRVEVGSLMEQHGAITSLEFFGQSHVLSGSADNSICIWRTSDWNCLHILGGHKGEINSIAVHPSGKLCFSVARDRTLRMWNLVKGRIAFIRRLEKEAELVMISQKGTNYALGFGKDLSVFNMNAELVGT--LEHPKKIHCAVF 212          
The following BLAST results are available for this feature:
BLAST of NO22G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853625.16.700e-12763.56hypothetical protein NGA_0430201 [Nannochloropsis ... [more]
EWM21449.11.600e-11567.63pak1ip1 protein [Nannochloropsis gaditana][more]
CBJ48726.11.700e-5337.70conserved unknown protein [Ectocarpus siliculosus][more]
CCI46437.13.300e-4936.65unnamed protein product [Albugo candida][more]
GAY00479.14.800e-4836.29p21-activated protein kinase-interacting protein, ... [more]
CCA20016.11.100e-4736.21p21activated protein kinaseinteracting protein put... [more]
XP_008862213.16.900e-4744.70hypothetical protein H310_00993 [Aphanomyces invad... [more]
XP_009822040.12.000e-4643.78hypothetical protein, variant 1 [Aphanomyces astac... [more]
XP_009822043.12.000e-4643.78hypothetical protein, variant 4 [Aphanomyces astac... [more]
OWZ18359.11.700e-4546.08P21-activated protein kinase-interacting protein [... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004151NSK004151Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01090.1NO22G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|544167gene_7111Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g27gene8966Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01090.1NO22G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01090 ID=NO22G01090|Name=NO22G01090|organism=Nannochloropsis oceanica|type=gene|length=2454bp
GGATGCCTGGGTGAGATGGAGGACGGATGGGATAGATGGAGTAGGATGTG
AGAGGATAGGCAGAAAGGCACAATTTGACCAGAGGTCCTTGAGCTGTAAT
GGCTGGTCCCACTATAAAGGCGTCTGTTGTCGCTCTGTCTGGGTGGTGGG
AGCGTGTGGGCGTGGTCGTGGTGGCACAAAGGAGCGTGGTTCATGATGCA
AGCACGACCTCCTTCTCTTGACGAGCACCACCACAATCAAGCCTTCATCC
ACCCACCACCCGCAGTCCTTGTTAGAGGAGGCAAAAATGTTCTAGTATTA
CACATGAGGTGGAAGAGGGGAGTGAGGGTGGGTCCTCGAGGCCAAAGAAT
TGTGCAACAGGTAGCGAAAGAAGAAGAGGACGCCTGGTGCTGCTTGTGTG
GTGTTGGGTGGAGGGCAGATGGGAGGACGGAAGAAGAATGAAACTTTGCG
ACCTCAACGAGGATATTGGCCAGTGTTCCATAAGCTCTTCGCCCGCTTTG
TGCTCTGTCTAGTGCTTGTGCTTTGTGAGACGCGGGGGAAACGGGCTAGC
CTCCTTACCGGCCACCCATCAGACCCGCCTTGATTGGTTGACACGCCTCT
ACAGCGCTCTCCCCTCCCTCTCTCCTCACAGATCACTAATGCCGGCCCCT
GGACCTCCTAGTGCAGCAACGACCGTCGTTAATGCCGGGCCTCCTTTACA
GCCACCTGCTTTTGCGCCCAAGACAATTTGCGTAGCTGGTACCTATGACG
GAGGCATTGTTGGTTGGGAAGTCCAGCGTAGGACCCAAGACGCAACAGGG
CCAGCAAAACCCGCGGCGCTCAAGATGgtacgtacgtacgccttgccctt
gcacttaacatggtgggacgcgtaagaggaacttacggataaaactcttc
gtatctcacccagtccttctataaagttgtctctatgaactcacgagaac
acttcctcccactccacctcgcacacagACCTTCGCCTACACCCCCCACC
AAGGCAGCGTCCGTTCCCTTGCCGTACCCAGGGGAGGTGCGAAAGCAGGC
CTCCTCCTTGTGTCGGGCGGAATGGACGAACACATCCGCATGTACGACCT
GCGAAAAAGAGCGGAGGCCGGAGAGCTTCTCCACCATAAGGGCACCATCA
CCGCCCTTGGCTTCGTGGGGTCATCCCACTTGCTGAGCGGAAGCGAGGAT
GGCATGGTTTGCATTTGGCGTGTGTACGATTGGAGTTTGTTGCACATTTT
AGGAGGGCATAAAGGAGCTGTCACTGCGGTGGCTTTACATCCCTCGGGAA
AGCTGGCCCTGTCCACCGGGCGAGATCGGAGTTTACGTCTCTGGGATTTA
GTCAAAGGCCGGTGTGCATATATCACCAAGTTGGAGGTAGTGGCGGAGAG
CGTGAAATGGTCGGAGGACGGGGAGGCATATGTCTTGCTGTTGGGGGATC
GTCGGTTGGAAGTTCGGCGGACGGCTGATAACAAGCCTACGGCCATCCTG
GTCCACCCATCGCGGATTACCGCTCTGACATTCCTTCCTTCCTCCTCCTC
TTTCTCATCTTCGGATTCTTACGAGGAGGAGAAGGAGAAGGAAAAAGGAA
AGAAGCAGCAGCATGTGTTAACAGCGTGCGATGACTTGCAGCTTCGGATT
GTGGATGGAGCGAGTGGAGCTATCATCTCCAGTATAGATGTCACCCCCTT
CTGTGGGCGAATCAAGGAAGCCGTGCTCTTGCACGGTAGCAGTAGCAGTG
GGGAGGGAGGAAGGGAGGTAGTGACGGCCTCATCGAATGGGAAGATTGTT
ATTTGGTCGATCAACGCCGCAGGCACTGTCGTACGGCCTGGCCCCAGAAC
TAGTCTCGGAGAGTGCGTGCGTATCACTTGCCTAGCCGCCTACGCAGTCT
CGGAAGGGGGGGCGGGTACAGAAGCAGCTGCGGCGGCTGCGGGACTTGCG
CAGGTGAACAAGCGAAAGAAACGGAAGCGTAAACATAAAGAGGAGGTGAA
GGAGGGGGGCGAAGAAGTGGTGCTGGGGCATGATAGGGGGATGCTCAGGC
ACGAGAAAATGTTGAAACAGCATAAAAAGGACAGGGCGAGCAAAGGCTCG
AGTGGGGTATCGCCATTTAAACAGAAAGAACCTATGGGCGAAGTGGGCAG
CAGCATTAGGGACGACAGCAGCAAGATTAGAGGGGAGAGAGCGAGGAAAC
CGCAACAGCAGCAGCAGCAGCACCAAGAGTCAAGCAAGAGTCAAGCAGGT
TTGTAGATCGTACGCAGGTCAATAGCTATGACATTTTTTTTTAGAAAAAG
CAGCACTATCAACAAGATAACGGGAAAAAAACGAGGAAGCCTTCTGCTGT
TAAGACTAGGAGCGGTGTCGTGAGTTTCTGACATTGAAATCAACTAAAAG
TACCGGGGGAGGGAGTGGAATGAGAAAAGAAAAACAGCTAGTATTTAATG
AATC
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protein sequence of NO22G01090.1

>NO22G01090.1-protein ID=NO22G01090.1-protein|Name=NO22G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=489bp
MPAPGPPSAATTVVNAGPPLQPPAFAPKTICVAGTYDGGIVGWEVQRRTQ
DATGPAKPAALKMTFAYTPHQGSVRSLAVPRGGAKAGLLLVSGGMDEHIR
MYDLRKRAEAGELLHHKGTITALGFVGSSHLLSGSEDGMVCIWRVYDWSL
LHILGGHKGAVTAVALHPSGKLALSTGRDRSLRLWDLVKGRCAYITKLEV
VAESVKWSEDGEAYVLLLGDRRLEVRRTADNKPTAILVHPSRITALTFLP
SSSSFSSSDSYEEEKEKEKGKKQQHVLTACDDLQLRIVDGASGAIISSID
VTPFCGRIKEAVLLHGSSSSGEGGREVVTASSNGKIVIWSINAAGTVVRP
GPRTSLGECVRITCLAAYAVSEGGAGTEAAAAAAGLAQVNKRKKRKRKHK
EEVKEGGEEVVLGHDRGMLRHEKMLKQHKKDRASKGSSGVSPFKQKEPMG
EVGSSIRDDSSKIRGERARKPQQQQQQHQESSKSQAGL*
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Synonyms
Publications