NO22G01000, NO22G01000 (gene) Nannochloropsis oceanica

Overview
NameNO22G01000
Unique NameNO22G01000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1356
Alignment locationchr22:313880..315235 -

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Properties
Property NameValue
DescriptionWD40-repeat-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:313880..315235 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO22G01000 vs. NCBI_GenBank
Match: EWM21446.1 (WD40-repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 380.2 bits (975), Expect = 8.100e-102
Identity = 192/383 (50.13%), Postives = 222/383 (57.96%), Query Frame = 0
Query:   13 THVIRLLTRRCERGTSFPNTHALEAWAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYETCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNATRTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDSVLG-PGRRGWG 395
            T+V++LL  R   G +     ALE+WAE+ S++ A  HY  LPR TKSTIATCFSPDG+  ASTHGDH+VKL+C+ T RVL  L GHPRTPWTVK+HP +P LLASGCIGGQVRIWD  +G CL+RA+LDLPIISLSFHPS   GT +LAIATFH+IWLWPY+TCA+PYNEWQTERLLRCVCFPPP GRHIL+GL N TRT P  +                             TFHLF WDFD +KAM PR +R                                                                         YSSPL RPRPL+E A+LYNDGG D+S CGR LVTCA+F   D +LG      WG
Sbjct:   10 TNVLQLLENRRRHGETGATQRALESWAERYSLVHAQAHYISLPRSTKSTIATCFSPDGNMLASTHGDHSVKLVCYHTRRVLRVLVGHPRTPWTVKFHPRSPRLLASGCIGGQVRIWDAESGHCLHRAALDLPIISLSFHPS-TAGTQILAIATFHSIWLWPYQTCARPYNEWQTERLLRCVCFPPPQGRHILVGLSNDTRTAPTMM---QRHSEDNESGGERDRGAGTTPAGSPKTFHLFCWDFDAEKAMVPRARRTPMAPMRGRPGRGDEEVGEGSAPPVVMR-------------------------------------------HLYSSPLGRPRPLLEKAVLYNDGGMDVSACGRFLVTCAQFQRHDLILGSDSSEAWG 345          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: XP_024579475.1 (WD40 repeat-containing protein [Plasmopara halstedii] >CEG43106.1 WD40 repeat-containing protein [Plasmopara halstedii])

HSP 1 Score: 189.1 bits (479), Expect = 2.700e-44
Identity = 122/354 (34.46%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+ICF+T  V+ TL GHPRTPW+VK+HP NP  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESAAKHQSRYFELPQTTKSTISIAISPDGKTFASTHGDHTVKIICFETGNVIQTLVGHPRTPWSVKFHPTNPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPTKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: XP_009518921.1 (hypothetical protein PHYSODRAFT_556290 [Phytophthora sojae] >EGZ23633.1 hypothetical protein PHYSODRAFT_556290 [Phytophthora sojae])

HSP 1 Score: 186.0 bits (471), Expect = 2.200e-43
Identity = 121/354 (34.18%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +VL TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESASKHQSRYFELPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVLQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: ETI49356.1 (hypothetical protein F443_06703 [Phytophthora parasitica P1569] >ETL95933.1 hypothetical protein L917_06384 [Phytophthora parasitica] >ETO78089.1 hypothetical protein F444_06770 [Phytophthora parasitica P1976])

HSP 1 Score: 185.7 bits (470), Expect = 2.900e-43
Identity = 120/354 (33.90%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +V+ TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESAAKHQSRYFQLPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: ETK89354.1 (hypothetical protein L915_06575 [Phytophthora parasitica] >ETP19129.1 hypothetical protein F441_06706 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 185.7 bits (470), Expect = 2.900e-43
Identity = 120/354 (33.90%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +V+ TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESAAKHQSRYFQLPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: ETL42685.1 (hypothetical protein L916_06514 [Phytophthora parasitica] >ETP47188.1 hypothetical protein F442_06738 [Phytophthora parasitica P10297])

HSP 1 Score: 185.7 bits (470), Expect = 2.900e-43
Identity = 120/354 (33.90%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +V+ TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESAAKHQSRYFELPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: XP_008892306.1 (hypothetical protein PPTG_02792 [Phytophthora parasitica INRA-310] >ETM49127.1 hypothetical protein L914_06487 [Phytophthora parasitica] >ETN23108.1 hypothetical protein PPTG_02792 [Phytophthora parasitica INRA-310] >KUF72803.1 Activating molecule in BECN1-regulated autophagy protein 1 [Phytophthora nicotianae])

HSP 1 Score: 185.7 bits (470), Expect = 2.900e-43
Identity = 120/354 (33.90%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +V+ TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESAAKHQSRYFELPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: KUF82814.1 (Activating molecule in BECN1-regulated autophagy protein 1 [Phytophthora nicotianae])

HSP 1 Score: 185.7 bits (470), Expect = 2.900e-43
Identity = 120/354 (33.90%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +V+ TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESAAKHQSRYFELPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: POM57656.1 (Hypothetical protein PHPALM_37802 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 185.7 bits (470), Expect = 2.900e-43
Identity = 120/354 (33.90%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +V+ TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESAAKHQSRYFELPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
BLAST of NO22G01000 vs. NCBI_GenBank
Match: XP_002999248.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69394.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 185.3 bits (469), Expect = 3.800e-43
Identity = 120/354 (33.90%), Postives = 156/354 (44.07%), Query Frame = 0
Query:   38 WAEKRSILLAHPHYTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHPRTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSFHPSPLPGTHLLAIATFHAIWLWPYE-TCAKPYNEWQTERLLRCVCFPPPDGRHILIGLGNAT------RTPPPQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFHLFIWDFDVQKAMTPRNKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVQYYSSPLSRPRPLIENALLYNDGGFDISGCGRILVTCAEFHPRDS 385
            WAE  S       Y  LP+ TKSTI+   SPDG TFASTHGDHTVK+IC +T +V+ TL GHPRTPW+VK+HP +P  +ASGC+G QVR WD   GRCLY ++L   IIS+SFHPS      +LAIA+   ++ W Y+ TC  P     + + LR V F  PD   I++G  N        + PP  L                             T  L +WDFD   A++P                                                                        P +      ++  R ++ +AL+YNDGGFDIS CGR L  CA+F  R +
Sbjct:   61 WAESESSAKHQSRYFELPQTTKSTISIAISPDGKTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPS----GDILAIASGTCVYTWDYQHTC--PRIAMFSYQTLRSVTF-LPDPSKIMVGEANERYVRPQGQAPPSDL-----------------------------TVTLTMWDFDPSWALSPE-----------------------------------------------------------------------PLLT--KKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLRQA 305          
The following BLAST results are available for this feature:
BLAST of NO22G01000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21446.18.100e-10250.13WD40-repeat-containing protein [Nannochloropsis ga... [more]
XP_024579475.12.700e-4434.46WD40 repeat-containing protein [Plasmopara halsted... [more]
XP_009518921.12.200e-4334.18hypothetical protein PHYSODRAFT_556290 [Phytophtho... [more]
ETI49356.12.900e-4333.90hypothetical protein F443_06703 [Phytophthora para... [more]
ETK89354.12.900e-4333.90hypothetical protein L915_06575 [Phytophthora para... [more]
ETL42685.12.900e-4333.90hypothetical protein L916_06514 [Phytophthora para... [more]
XP_008892306.12.900e-4333.90hypothetical protein PPTG_02792 [Phytophthora para... [more]
KUF82814.12.900e-4333.90Activating molecule in BECN1-regulated autophagy p... [more]
POM57656.12.900e-4333.90Hypothetical protein PHPALM_37802 [Phytophthora pa... [more]
XP_002999248.13.800e-4333.90conserved hypothetical protein [Phytophthora infes... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01000.1NO22G01000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|102763gene_7101Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01000.1NO22G01000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01000 ID=NO22G01000|Name=NO22G01000|organism=Nannochloropsis oceanica|type=gene|length=1356bp
ATGGGTTCCCAGCACCGAAAAAGTAGGCGGCCACGAACACATGTCATACG
GCTACTCACGCGTCGTTGTGAGCGTGGGACAAGCTTTCCCAACACGgtag
gttgtagataatggtcgttcgtcaatcaacccatgtcacaattcaattat
tatccctaccccataccgactcctcatcctcctcttaccttaccgcccct
cctatcctaccccacctccttcactcgcgaacaaaagCACGCCCTCGAGG
CTTGGGCGGAAAAACGAAGCATCCTTCTAGCCCATCCACACTATACCCCC
CTTCCGCGCTATACCAAATCCACCATCGCCACCTGCTTCTCACCCGACGG
CCACACCTTTGCCTCCACCCACGGTGACCACACTGTAAAACTCATATGCT
TCCAGACCAACCGCGTCCTCCACACGCTCACCGGACACCCCCGCACGCCT
TGGACCGTCAAATATCACCCATGTAACCCTCACCTCCTCGCCTCAGGCTG
TATTGGTGGACAAGTCCGAATCTGGGACACATTAGCTGGCCGCTGTCTGT
ACCGCGCCTCGCTCGACCTCCCCATCATCTCCCTTTCCTTTCATCCCTCC
CCCCTTCCGGGAACCCACCTTCTCGCTATCGCTACATTTCATGCCATCTG
GCTCTGGCCTTATGAGACGTGTGCGAAACCATACAATGAGTGGCAGACAG
AACGGTTGCTTCGGTGTGTCTGTTTCCCTCCACCCGACGGCCGACACATC
TTGATAGGGCTAGGGAACGCGACCAGGACTCCGCCGCCACAGCTGCTCCA
GCAACAGCAGCAGCAACAGCAACAACATAATCAGTACCTCCAGCACCATC
AGCACACTCAGCCACAGCAGCCGCAGCAGAAGACCTTCCATCTGTTCATA
TGGGATTTCGATGTACAAAAAGCAATGACACCAAGGAATAAACGTCCTCC
AATGGCCCCAGCGCGGCAACGACGAAGGCGCGTCCAAGAAGCAGACGAAG
AGGAAGATGATCATGATGAAGGAGGGGGGAGAGAAGGAGGAGAAGGAGGA
GGAGGAGACGGGCAAGAGGGAGGAGGAAGAGAAGGTGGACGAGGACGCAG
CCGAGTTACGAGCACTTCTGCTCCTCCTCCTCCTCCCCCCGCCGCAGGCC
CACGTGTGCAATATTACTCGTCTCCCCTCAGTCGTCCTCGGCCACTAATC
GAAAATGCCTTGCTGTACAATGACGGTGGCTTTGATATTTCAGGGTGTGG
AAGGATCTTGGTGACTTGTGCCGAGTTCCACCCGCGGGATTCGGTGTTGG
GGCCAGGGAGGAGAGGGTGGGGGGAGGAAGGGATAGCGGTGGGGATGAAG
GAGTGA
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protein sequence of NO22G01000.1

>NO22G01000.1-protein ID=NO22G01000.1-protein|Name=NO22G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MGSQHRKSRRPRTHVIRLLTRRCERGTSFPNTHALEAWAEKRSILLAHPH
YTPLPRYTKSTIATCFSPDGHTFASTHGDHTVKLICFQTNRVLHTLTGHP
RTPWTVKYHPCNPHLLASGCIGGQVRIWDTLAGRCLYRASLDLPIISLSF
HPSPLPGTHLLAIATFHAIWLWPYETCAKPYNEWQTERLLRCVCFPPPDG
RHILIGLGNATRTPPPQLLQQQQQQQQQHNQYLQHHQHTQPQQPQQKTFH
LFIWDFDVQKAMTPRNKRPPMAPARQRRRRVQEADEEEDDHDEGGGREGG
EGGGGDGQEGGGREGGRGRSRVTSTSAPPPPPPAAGPRVQYYSSPLSRPR
PLIENALLYNDGGFDISGCGRILVTCAEFHPRDSVLGPGRRGWGEEGIAV
GMKE*
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