NO22G00990, NO22G00990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO22G00990 vs. NCBI_GenBank
Match: EWM21446.1 (WD40-repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 140.6 bits (353), Expect = 6.800e-30 Identity = 77/133 (57.89%), Postives = 90/133 (67.67%), Query Frame = 0 Query: 118 GYQYHGPRHRYLAPILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVRV---SREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPKRG 248 GY+Y G R YLAPIL+ARPL GV++G +TSVKLS +GS+V+LGYGG R SR G G H + EVYET RM RVRS+RSG E+EDVNIARFHP HGFVYGTKQG +CV+ RG Sbjct: 479 GYRYQGQRQGYLAPILAARPLRGVSLGEITSVKLSPSGSLVMLGYGGARAVPGSRGAG------GGHTMVEVYETERMGRVRSVRSG-----------EDEDVNIARFHPIPAHGFVYGTKQGGLCVFATPRG 594
BLAST of NO22G00990 vs. NCBI_GenBank
Match: OQR91411.1 (hypothetical protein ACHHYP_04705 [Achlya hypogyna]) HSP 1 Score: 74.3 bits (181), Expect = 6.000e-10 Identity = 50/118 (42.37%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 132 ILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPKRGPF 250 +L L A GGVTSVK S TG+ VLLGYG R+ + + H V +Y M V + S E +DVNIA FHP GHGF+YGTKQGR+ V RG F Sbjct: 485 VLQTTLLAETAAGGVTSVKFSPTGAYVLLGYG----VRDRIQRINQFPLHRVTRIYRWEDMALVSHMES------------EVDDVNIALFHPLPGHGFIYGTKQGRLRVCYGYRGLF 586
BLAST of NO22G00990 vs. NCBI_GenBank
Match: XP_012203511.1 (hypothetical protein SPRG_09000 [Saprolegnia parasitica CBS 223.65] >KDO25701.1 hypothetical protein SPRG_09000 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 73.9 bits (180), Expect = 7.800e-10 Identity = 49/118 (41.53%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 132 ILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPKRGPF 250 ++ L A GGVTSVK S TG+ VLLGYG R+ + + H V +Y M V + S E +DVNIA FHP GHGF+YGTKQGR+ V RG F Sbjct: 479 VMQTTLLAETAAGGVTSVKFSPTGAYVLLGYG----VRDRIQRINQFPLHRVTRIYRWEDMTLVSHMES------------EVDDVNIALFHPLPGHGFIYGTKQGRLRVCYGYRGHF 580
BLAST of NO22G00990 vs. NCBI_GenBank
Match: OEU10831.1 (WD40 repeat-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 73.9 bits (180), Expect = 7.800e-10 Identity = 53/139 (38.13%), Postives = 67/139 (48.20%), Query Frame = 0 Query: 125 RHRYLAPILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVR---------VSREVG------REGEREGYHVVAEVYETG---RMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPK 246 R L +LSA PL G VT VK S L+GY GVR + E G + YH V +Y+ +M V ++ SG ++DVNIARFHP +G+GFVYGTKQGRI V GP+ Sbjct: 1249 RRPRLGQLLSACPLDGTKASAVTCVKFSPCTEFCLIGY-GVREPHVEPPPTTTGETGDGTIYDAPSQHPPYHPVTAMYQVNMGEKMKHVSTMLSG------------DDDVNIARFHPDSGYGFVYGTKQGRIRVLGPR 1374
BLAST of NO22G00990 vs. NCBI_GenBank
Match: XP_008607748.1 (hypothetical protein SDRG_03882 [Saprolegnia diclina VS20] >EQC38924.1 hypothetical protein SDRG_03882 [Saprolegnia diclina VS20]) HSP 1 Score: 73.6 bits (179), Expect = 1.000e-9 Identity = 48/108 (44.44%), Postives = 57/108 (52.78%), Query Frame = 0 Query: 142 AMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPKRGPF 250 A GGVTSVK S TG+ VLLGYG R+ + + H V +Y M V + S E +DVNIA FHP GHGF+YGTKQGR+ V RG F Sbjct: 491 AAGGVTSVKFSPTGAYVLLGYG----VRDRIQRINQFPLHRVTRIYRWEDMTLVSHMES------------EVDDVNIALFHPLPGHGFIYGTKQGRLRVCYAYRGHF 582
BLAST of NO22G00990 vs. NCBI_GenBank
Match: XP_002176655.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51118.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 73.6 bits (179), Expect = 1.000e-9 Identity = 48/117 (41.03%), Postives = 61/117 (52.14%), Query Frame = 0 Query: 129 LAPILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPK 246 + +L A PL G VT VK S + L+GYG RE EG +H V +Y R+R GG + ++DVNIARFHP +GHGFVYGTKQGR+ V P+ Sbjct: 659 MGQLLEACPLDGAKASAVTCVKFSPSADFCLIGYG----VREPVVEGGCH-FHPVTALY------RIR-----GGMTHVSTMLSSDDDVNIARFHPDSGHGFVYGTKQGRVRVLSPR 759
BLAST of NO22G00990 vs. NCBI_GenBank
Match: OQR97307.1 (hypothetical protein THRCLA_07020 [Thraustotheca clavata]) HSP 1 Score: 73.6 bits (179), Expect = 1.000e-9 Identity = 48/108 (44.44%), Postives = 57/108 (52.78%), Query Frame = 0 Query: 142 AMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPKRGPF 250 A GGVTSVK S TG+ VLLGYG R+ + + H V +Y M V + S E +DVNIA FHP GHGF+YGTKQGR+ V RG F Sbjct: 494 AAGGVTSVKFSPTGAYVLLGYG----VRDRIQRINQFPLHRVTRIYRWEDMTLVSHMES------------EVDDVNIALFHPLPGHGFIYGTKQGRLRVCYGYRGQF 585
BLAST of NO22G00990 vs. NCBI_GenBank
Match: XP_008876102.1 (hypothetical protein H310_11278 [Aphanomyces invadans] >ETV95401.1 hypothetical protein H310_11278 [Aphanomyces invadans]) HSP 1 Score: 70.9 bits (172), Expect = 6.600e-9 Identity = 48/121 (39.67%), Postives = 62/121 (51.24%), Query Frame = 0 Query: 129 LAPILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPKRGPF 250 L ++ L A GGVTSVK S +G+ VLLGYG R+ + + H V +Y M V + S + +DVNIA FHP AG GF+YGTKQGR+ + P RG F Sbjct: 490 LGTVVQTALLAETAAGGVTSVKFSPSGAYVLLGYG----VRDRIQRINQFPLHRVTRMYRWEDMSLVSHVES------------DADDVNIALFHPLAGGGFLYGTKQGRVRLCRPWRGAF 594
BLAST of NO22G00990 vs. NCBI_GenBank
Match: GAX10381.1 (hypothetical protein FisN_3Lh599 [Fistulifera solaris]) HSP 1 Score: 70.9 bits (172), Expect = 6.600e-9 Identity = 47/117 (40.17%), Postives = 60/117 (51.28%), Query Frame = 0 Query: 129 LAPILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPK 246 L +L A PL VT VK S + L+GY GVR E EG H + + R+R GG + + + +DVNIARFHP +GHGFVYGTKQGR+ V P+ Sbjct: 601 LGQLLEACPLDPAKASAVTCVKFSPSTDFCLIGY-GVR---------EPEGTH-----HPVSALYRIR-----GGMQHVSTMLSDMDDVNIARFHPDSGHGFVYGTKQGRVRVLSPR 697
BLAST of NO22G00990 vs. NCBI_GenBank
Match: GAX20551.1 (hypothetical protein FisN_3Hh599 [Fistulifera solaris]) HSP 1 Score: 70.5 bits (171), Expect = 8.700e-9 Identity = 47/117 (40.17%), Postives = 60/117 (51.28%), Query Frame = 0 Query: 129 LAPILSARPLHGVAMGGVTSVKLSATGSMVLLGYGGVRVSREVGREGEREGYHVVAEVYETGRMVRVRSLRSGGGEEGRERRVEEEEDVNIARFHPSAGHGFVYGTKQGRICVYGPK 246 L +L A PL VT VK S + L+GY GVR E EG H + + R+R GG + + + +DVNIARFHP +GHGFVYGTKQGR+ V P+ Sbjct: 634 LGQLLEACPLDPAKASAVTCVKYSPSTDFCLIGY-GVR---------EPEGTH-----HPVSALYRIR-----GGMQHVSTMLSDMDDVNIARFHPDSGHGFVYGTKQGRVRVLSPR 730 The following BLAST results are available for this feature:
BLAST of NO22G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00990 ID=NO22G00990|Name=NO22G00990|organism=Nannochloropsis oceanica|type=gene|length=765bpback to top protein sequence of NO22G00990.1 >NO22G00990.1-protein ID=NO22G00990.1-protein|Name=NO22G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top Synonyms
Publications
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